Non-Coding RNA Search

Ss1.1-Mixn-0029d09.5

Sequence:


               
               GCGACAAGCACTCCAAGTTATTTGAAGAGCCCGAGGACCCCAGTAACCGCTCCTTCTTCT
CCGAGATCATCTCCTCCGTGTCGGACGTGAAGTTCAGCCACAGCGGCCGGTACATGCTCA
CCCGAGACTACCTCACGGTCAAGGTCTGGGACCTGAACATGGAGGCGCGGCCCATAGAGA
CCTACCAGGTCCACGATTACCTTCGGAGCAAGCTCTGTTCCCTGTATGAGAACGACTGCA
TTTTCGACAAGTTCGAATGTGCCTGGAATGGGAGTGACAGCGTCATCATGACCGGGGCCT
ACAACAACTTCTTCCGCATGTTTGACCGCAACACCAAGCGGGACGTGACCCTGGAGGCGT
CCCGGGAGAGCAGCAAGCCCCGGGCGGTGCTCAAGCCGCGGCGCGTGTGCGTGGGCGGCA
AGCGGCGCCGGGACGACATCAGCGTGGACAGCCTGGACTTCACCAAGAAGATCCTGCACA
CGGCCTGGCACCCGGCCGAGAACATCATCGCCATCGCGGCCACCAACAACCTGTACATCT
TCCAGGACAAGGTGAACTCCGACATGCACTAGGCGCCCCGCGCGGCGGTCCCCGCCCGAC
GGTCCAACGGCCACTCGCGGAGCGGCCACCAGGGGGCGCTGGGCCGTCCCTGCAGCATCC
CCAGGCCCGACCGCTTTGGCGGGGGCGCTGATCTCTTCGAAAACAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGACAAGCACTCCAAGTTATTTGAAGAGCCCGAGGACCCCAGTAACCGCTCCTTCTTCT
CCGAGATCATCTCCTCCGTGTCGGACGTGAAGTTCAGCCACAGCGGCCGGTACATGCTCA
CCCGAGACTACCTCACGGTCAAGGTCTGGGACCTGAACATGGAGGCGCGGCCCATAGAGA
CCTACCAGGTCCACGATTACCTTCGGAGCAAGCTCTGTTCCCTGTATGAGAACGACTGCA
TTTTCGACAAGTTCGAATGTGCCTGGAATGGGAGTGACAGCGTCATCATGACCGGGGCCT
ACAACAACTTCTTCCGCATGTTTGACCGCAACACCAAGCGGGACGTGACCCTGGAGGCGT
CCCGGGAGAGCAGCAAGCCCCGGGCGGTGCTCAAGCCGCGGCGCGTGTGCGTGGGCGGCA
AGCGGCGCCGGGACGACATCAGCGTGGACAGCCTGGACTTCACCAAGAAGATCCTGCACA
CGGCCTGGCACCCGGCCGAGAACATCATCGCCATCGCGGCCACCAACAACCTGTACATCT
TCCAGGACAAGGTGAACTCCGACATGCACTAGGCGCCCCGCGCGGCGGTCCCCGCCCGAC
GGTCCAACGGCCACTCGCGGAGCGGCCACCAGGGGGCGCTGGGCCGTCCCTGCAGCATCC
CCAGGCCCGACCGCTTTGGCGGGGGCGCTGATCTCTTCGAAAACAGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|619213|gb|AAA58955.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|619213|gb|AAA58955.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               10-545, gnl|bosTau2|chr19 (39290335-39290854)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-545, gnl|bosTau2|chr19 (39290335-39290854)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)