Ss1.1-Mixn-0029l02.5
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CGACAGGCCGGAGCAAGGGCCTATCAGGGGCGGGGCGGGGCGAGGCCCGGCTGCTTCTGG
GCCCCAGAGCGGGTTTGACGGAAGGAGAGGCGCGGCAACGGCGGCGGCCGAGAAGGAGGA
GGAGGATGGAGGCGGTGGTGTTCGTTTTCTCGCTCCTCGACTGTTGCGCGCTCATCTTCC
TCTCGGTGTACTTCATAATTACCTTGTCTGATTTAGAATGTGATTACATTAATGCTAGAT
CATGTTGCTCAAAATTAAACAAGTGGGTCCTTCCAGAATTGGTCGGTCACACCATTGTCA
CTGTGTTAATGCTCATTTCATTGCACTGGTTTATCTTCCTTCTCAACTTGCCCGTTGCCA
CTTGGAATATATATCGGTTTATTATGGTGCCAAGTGGTAACATGGGAGTGTTTGATCCCA
CGGAAATACACAATCGAGGGCAGCTGAAATCACACATGAAAGAAGCCATGATCAAGCTTG
GGTTCCACCTGCTCTGTTTCTTCATGTATCTTTATAGTATGATTTTAGCTTTGATAAATG
ACTGAAGCTGGAGGAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGC
CAGAGACTACTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATTTTTTCCTCTTTG
AACAAAAAGTATTTTTGCTGTATTTTTACCATATAAAATATTTAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CGACAGGCCGGAGCAAGGGCCTATCAGGGGCGGGGCGGGGCGAGGCCCGGCTGCTTCTGG
GCCCCAGAGCGGGTTTGACGGAAGGAGAGGCGCGGCAACGGCGGCGGCCGAGAAGGAGGA
GGAGGATGGAGGCGGTGGTGTTCGTTTTCTCGCTCCTCGACTGTTGCGCGCTCATCTTCC
TCTCGGTGTACTTCATAATTACCTTGTCTGATTTAGAATGTGATTACATTAATGCTAGAT
CATGTTGCTCAAAATTAAACAAGTGGGTCCTTCCAGAATTGGTCGGTCACACCATTGTCA
CTGTGTTAATGCTCATTTCATTGCACTGGTTTATCTTCCTTCTCAACTTGCCCGTTGCCA
CTTGGAATATATATCGGTTTATTATGGTGCCAAGTGGTAACATGGGAGTGTTTGATCCCA
CGGAAATACACAATCGAGGGCAGCTGAAATCACACATGAAAGAAGCCATGATCAAGCTTG
GGTTCCACCTGCTCTGTTTCTTCATGTATCTTTATAGTATGATTTTAGCTTTGATAAATG
ACTGAAGCTGGAGGAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGC
CAGAGACTACTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATTTTTTCCTCTTTG
AACAAAAAGTATTTTTGCTGTATTTTTACCATATAAAATATTTAAAAA
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gi|41223370|gb|AAH65395.1| |
Protein identifier
|
gi|41223370|gb|AAH65395.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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1-211, gnl|bosTau2|chr16 (13867518-13867314) |
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1-211, gnl|Hg17|chr1 (220851275-220851444) |
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262-378, gnl|bosTau2|chr16 (13858745-13858629) |
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262-378, gnl|canFam2|chr7 (42986679-42986755) |
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262-378, gnl|danRer3|chr25 (1827619-1827545) |
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262-378, gnl|dasNov1|scaffold_252499 (899-823) |
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262-378, gnl|echTel1|scaffold_283748 (49147-49070) |
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262-378, gnl|Hg17|chr1 (220860314-220860430) |
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262-378, gnl|hg17|chr6 (127779542-127779617) |
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262-378, gnl|loxAfr1|scaffold_31173 (4104-4180) |
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262-378, gnl|mm7|chr1 (181135620-181135544) |
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262-378, gnl|Mm7|chr1 (181135506-181135622) |
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262-378, gnl|monDom2|scaffold_0 (49730766-49730818) |
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262-378, gnl|oryCun1|scaffold_75250 (527-451) |
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262-378, gnl|panTro1|chr5 (130319414-130319489) |
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262-378, gnl|rheMac2|chr4 (136482123-136482047) |
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262-378, gnl|rn3|chr13 (97115668-97115592) |
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262-378, gnl|tetNig1|chrUn_random (165414306-165414230) |
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509-708, gnl|bosTau2|chr16 (13853440-13853241) |
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509-708, gnl|Hg17|chr1 (220870223-220870423) |
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509-708, gnl|Mm7|chr1 (181145821-181146028) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-211, gnl|bosTau2|chr16 (13867518-13867314) |
|
1-211, gnl|Hg17|chr1 (220851275-220851444) |
| |
|
262-378, gnl|bosTau2|chr16 (13858745-13858629) |
|
262-378, gnl|canFam2|chr7 (42986679-42986755) |
|
262-378, gnl|danRer3|chr25 (1827619-1827545) |
|
262-378, gnl|dasNov1|scaffold_252499 (899-823) |
|
262-378, gnl|echTel1|scaffold_283748 (49147-49070) |
|
262-378, gnl|Hg17|chr1 (220860314-220860430) |
|
262-378, gnl|hg17|chr6 (127779542-127779617) |
|
262-378, gnl|loxAfr1|scaffold_31173 (4104-4180) |
|
262-378, gnl|mm7|chr1 (181135620-181135544) |
|
262-378, gnl|Mm7|chr1 (181135506-181135622) |
|
262-378, gnl|monDom2|scaffold_0 (49730766-49730818) |
|
262-378, gnl|oryCun1|scaffold_75250 (527-451) |
|
262-378, gnl|panTro1|chr5 (130319414-130319489) |
|
262-378, gnl|rheMac2|chr4 (136482123-136482047) |
|
262-378, gnl|rn3|chr13 (97115668-97115592) |
|
262-378, gnl|tetNig1|chrUn_random (165414306-165414230) |
| |
|
509-708, gnl|bosTau2|chr16 (13853440-13853241) |
|
509-708, gnl|Hg17|chr1 (220870223-220870423) |
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509-708, gnl|Mm7|chr1 (181145821-181146028) |
|
mgp (0.692042) |
|
cmu (0.372787) |
|
sto (0.359648) |
|
duo (0.345602) |
|
nco (0.323468) |
|
liv (0.292569) |
|
ova (0.258264) |
|
sug (0.254582) |
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cbe (0.239234) |
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pgl (0.236967) |
|
tes (0.207814) |
|
col (0.195008) |
|
mgm (0.180343) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
rec (0.17307) |
|
cje (0.165235) |
|
mga (0.160205) |
|
lun (0.150489) |
|
ski (0.146735) |
|
csk (0.140746) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ese (0.126502) |
|
bla (0.124347) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
mgp (0.692042) |
|
cmu (0.372787) |
|
sto (0.359648) |
|
duo (0.345602) |
|
nco (0.323468) |
|
liv (0.292569) |
|
ova (0.258264) |
|
sug (0.254582) |
|
cbe (0.239234) |
|
pgl (0.236967) |
|
tes (0.207814) |
|
col (0.195008) |
|
mgm (0.180343) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
rec (0.17307) |
|
cje (0.165235) |
|
mga (0.160205) |
|
lun (0.150489) |
|
ski (0.146735) |
|
csk (0.140746) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ese (0.126502) |
|
bla (0.124347) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
