Non-Coding RNA Search

Ss1.1-Mixn-0029l23.5

Sequence:


               
               GGCGGGATGTGCCCCTAGAGATGCATTTAGTAGCCTGGTAAAGCAGAGTGGCCTGAGCCA
GGCAGGCACACCTGAGCGTCCCTCCTGGGGGCTGGGCACCTGCCCACATGACGATCCGCC
CAGCCTGCCGTCTGCATGGTGATGGTCACCTGCAAGTACGTGCAGCAAGGCTCGGCTCGG
TGCTGTGTTTCCAGGAGCTCATAAGCTTTGTGTGCTGTTGGGCGCATGTAGACGGTCTTT
GCCATGAGGAGAGGTGGAGCCGGCAGGCACATGGCCAGGCATGGGGCCGAGGGTGACCTT
TTGCATGAGGACAGGCAGGACCTTCGTTTCCCTCTTGGTGGGCAACATGGGCACTGCCGC
TCATCTGATCATCTTCCTCTCTAGGCCTCTCTGTCCCTAACGTGCATGGGGCCCTGGCTC
CTCTGGCTATCCCGTCAGCAGCGGCAGCGGCGGCAGCAGCAGGCCGGATCGCCATTCCAG
GTCTGGCAGGGGCAGGAAATTCCGTCCTGCTGGTCAGCAGCCTCAATCCCGAGGTACGTG
GCTCTTGTAGGCTGTCCCCCCGAAAGTACAGGCGCAGGGGAATAGTGCTCTCTGGGCCAA
ACGTGGACCGGTCCCCTCCCCCAGGCAGGCAGAGTCACAGAGTCCCTGGAGCAGGTCCTC
TGGCCGTCCTCTGCGCACAGTCCCCACGCCGCCTCCTCTCCCGCAGCCCTTGGAGTTCTC
CTTGTTTCCCTTAACATCTCAGTTTACGTTTCTGGTTCCGTGATATTGATAGTTGAAGCA
CCTGGTATATGAGAGCAATTTTGAAATTTCCAGCCCAACAGGCCCCAGTCTGCAGGGGCC
TGCTGGGCACCTCTGGGGAGGGGGCACCAGTCAACAGCAGTCAGCCGGGCCTGCTCTTTT
CTCAGGGACCAAATTGCTCTCAGGGAGCTGGGGTGGAATGATAAAAGGCTCCAAGTACTA
AACTCTGTAGATGGAATTCCAGCTTTACGAGCTGTTCTCTTGCTGTCTGACCATTGCTGT
GACCGCCCCCCGGCTCCTAGGGAAGTGCTCCAGTAGGAGCCGAGGAGGAAGGCAGTTCGC
AAGGGCCTGGTTCTGGGGGAGCGAGTGGGCCGGTGGGCACTGTCCTGCTCCCCGAGGCGG
CTCTCCTGCTGTCCCGGCCTGTGGCTGTAATGTGTGTGGTCTTGACTGATGGGACACCGC
GTGTTTCTTATGTATTTACTGACCTGTGTTTTTGCTACTTTTTTTCTTTTCTCCCCTTCC
CCTTTCCCAATTTTTTTTCTTGCCCTGATCCGGAATTTCTTTGCCAACTGACTGCACGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGGATGTGCCCCTAGAGATGCATTTAGTAGCCTGGTAAAGCAGAGTGGCCTGAGCCA
GGCAGGCACACCTGAGCGTCCCTCCTGGGGGCTGGGCACCTGCCCACATGACGATCCGCC
CAGCCTGCCGTCTGCATGGTGATGGTCACCTGCAAGTACGTGCAGCAAGGCTCGGCTCGG
TGCTGTGTTTCCAGGAGCTCATAAGCTTTGTGTGCTGTTGGGCGCATGTAGACGGTCTTT
GCCATGAGGAGAGGTGGAGCCGGCAGGCACATGGCCAGGCATGGGGCCGAGGGTGACCTT
TTGCATGAGGACAGGCAGGACCTTCGTTTCCCTCTTGGTGGGCAACATGGGCACTGCCGC
TCATCTGATCATCTTCCTCTCTAGGCCTCTCTGTCCCTAACGTGCATGGGGCCCTGGCTC
CTCTGGCTATCCCGTCAGCAGCGGCAGCGGCGGCAGCAGCAGGCCGGATCGCCATTCCAG
GTCTGGCAGGGGCAGGAAATTCCGTCCTGCTGGTCAGCAGCCTCAATCCCGAGGTACGTG
GCTCTTGTAGGCTGTCCCCCCGAAAGTACAGGCGCAGGGGAATAGTGCTCTCTGGGCCAA
ACGTGGACCGGTCCCCTCCCCCAGGCAGGCAGAGTCACAGAGTCCCTGGAGCAGGTCCTC
TGGCCGTCCTCTGCGCACAGTCCCCACGCCGCCTCCTCTCCCGCAGCCCTTGGAGTTCTC
CTTGTTTCCCTTAACATCTCAGTTTACGTTTCTGGTTCCGTGATATTGATAGTTGAAGCA
CCTGGTATATGAGAGCAATTTTGAAATTTCCAGCCCAACAGGCCCCAGTCTGCAGGGGCC
TGCTGGGCACCTCTGGGGAGGGGGCACCAGTCAACAGCAGTCAGCCGGGCCTGCTCTTTT
CTCAGGGACCAAATTGCTCTCAGGGAGCTGGGGTGGAATGATAAAAGGCTCCAAGTACTA
AACTCTGTAGATGGAATTCCAGCTTTACGAGCTGTTCTCTTGCTGTCTGACCATTGCTGT
GACCGCCCCCCGGCTCCTAGGGAAGTGCTCCAGTAGGAGCCGAGGAGGAAGGCAGTTCGC
AAGGGCCTGGTTCTGGGGGAGCGAGTGGGCCGGTGGGCACTGTCCTGCTCCCCGAGGCGG
CTCTCCTGCTGTCCCGGCCTGTGGCTGTAATGTGTGTGGTCTTGACTGATGGGACACCGC
GTGTTTCTTATGTATTTACTGACCTGTGTTTTTGCTACTTTTTTTCTTTTCTCCCCTTCC
CCTTTCCCAATTTTTTTTCTTGCCCTGATCCGGAATTTCTTTGCCAACTGACTGCACGGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8N160_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8N160_HUMAN

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               300-1023, gnl|bosTau2|chr7 (10610405-10609686)
               

               
               300-1023, gnl|Hg17|chr19 (757315-758098)
               

               
               300-1023, gnl|Mm7|chr10 (79640777-79641454)
               


               
               1047-1320, gnl|bosTau2|chr7 (10609609-10609333)
               

               
               1047-1320, gnl|Hg17|chr19 (758275-758618)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               300-1023, gnl|bosTau2|chr7 (10610405-10609686)
               

               
               300-1023, gnl|Hg17|chr19 (757315-758098)
               

               
               300-1023, gnl|Mm7|chr10 (79640777-79641454)
               


               
               1047-1320, gnl|bosTau2|chr7 (10609609-10609333)
               

               
               1047-1320, gnl|Hg17|chr19 (758275-758618)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	300-1023, gnl\|bosTau2\|chr7 (10610405-10609686)
	300-1023, gnl\|Hg17\|chr19 (757315-758098)
	300-1023, gnl\|Mm7\|chr10 (79640777-79641454)

	1047-1320, gnl\|bosTau2\|chr7 (10609609-10609333)
	1047-1320, gnl\|Hg17\|chr19 (758275-758618)