Ss1.1-Mixn-0030a19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGACGCCACTGTCTGTCTCCTCCAGAATGCATTCACTCTACCTCCTGCTCAGGGCCAGC CCCGCTGCCCTGCTCCTGATTCTCTGCCTGCAGCTTGGGACCAACAAAGCTCAGGAAGAA GTGGAAGACACTCGAAAGCCGATAATGCTGAACTTGCAAGTACCACTAACAGCAACAGCA GGTGAAGAGGTCACGGTGACACTCGATGTTGCAACACAACTGAGAGAATGTGTGGTGATT GCATCTTACCTCACGAGCGACATTTTGATTGATGGTGGTTTTAACTATAAATATACCAGC TGCCTCTGTGACGACTACCCGAGAAAGTTCTTCTGGGACTTCCAGACCAACAACAAAAGC ATGGTAATAACAGCCACGGTTGATATTATCCGTCAACTAGGTATCTGCCCTCAGGATCAG GCGGTGATACCCATTGCAGCAAACCGTTTTTTCTCCTCAAGGAGGCTAACCATAGTCTGA TCTTAAGGGAAGCTTTTGTCTCTGCACCGCCCTCCCCCGCCACCAGGCGGCTGCCTCCCA GGAGAGCGGGCTGGGGGATCTGCCGGGGTCTGTAGAATAAACGTCTTACAAGCGTAAAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGACGCCACTGTCTGTCTCCTCCAGAATGCATTCACTCTACCTCCTGCTCAGGGCCAGC CCCGCTGCCCTGCTCCTGATTCTCTGCCTGCAGCTTGGGACCAACAAAGCTCAGGAAGAA GTGGAAGACACTCGAAAGCCGATAATGCTGAACTTGCAAGTACCACTAACAGCAACAGCA GGTGAAGAGGTCACGGTGACACTCGATGTTGCAACACAACTGAGAGAATGTGTGGTGATT GCATCTTACCTCACGAGCGACATTTTGATTGATGGTGGTTTTAACTATAAATATACCAGC TGCCTCTGTGACGACTACCCGAGAAAGTTCTTCTGGGACTTCCAGACCAACAACAAAAGC ATGGTAATAACAGCCACGGTTGATATTATCCGTCAACTAGGTATCTGCCCTCAGGATCAG GCGGTGATACCCATTGCAGCAAACCGTTTTTTCTCCTCAAGGAGGCTAACCATAGTCTGA TCTTAAGGGAAGCTTTTGTCTCTGCACCGCCCTCCCCCGCCACCAGGCGGCTGCCTCCCA GGAGAGCGGGCTGGGGGATCTGCCGGGGTCTGTAGAATAAACGTCTTACAAGCGTAAAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 2-119, gnl|bosTau2|chr4 (59370003-59369886) | |
| 2-119, gnl|canFam2|chr16 (9477009-9476791) | |
| 2-119, gnl|dasNov1|scaffold_28531 (3252-3485) | |
| 2-119, gnl|echTel1|scaffold_14954 (998-1193) | |
| 2-119, gnl|hg17|chr7 (142346006-142346237) | |
| 2-119, gnl|Hg17|chr7 (142346019-142346138) | |
| 2-119, gnl|loxAfr1|scaffold_62022 (1157-1373) | |
| 2-119, gnl|mm7|chr6 (41786432-41786647) | |
| 2-119, gnl|Mm7|chr6 (41786445-41786549) | |
| 2-119, gnl|oryCun1|scaffold_174673 (2535-2295) | |
| 2-119, gnl|panTro1|chr6 (145143538-145143769) | |
| 2-119, gnl|rheMac2|chr3 (180781263-180781496) | |
| 2-119, gnl|rn3|chr4 (69909588-69909805) | |
| 366-593, gnl|bosTau2|chr4 (59360122-59359890) | |
| 366-593, gnl|canFam2|chr16 (9471063-9470144) | |
| 366-593, gnl|dasNov1|scaffold_122477 (4304-3396) | |
| 366-593, gnl|echTel1|scaffold_17746 (1637-2445) | |
| 366-593, gnl|hg17|chr7 (142352915-142353808) | |
| 366-593, gnl|Hg17|chr7 (142353458-142353669) | |
| 366-593, gnl|loxAfr1|scaffold_5525 (51668-52535) | |
| 366-593, gnl|mm7|chr6 (41790247-41791090) | |
| 366-593, gnl|Mm7|chr6 (41790733-41790946) | |
| 366-593, gnl|oryCun1|scaffold_81540 (2112-2974) | |
| 366-593, gnl|panTro1|chr6 (145150494-145151383) | |
| 366-593, gnl|rheMac2|chr3 (180788537-180789431) | |
| 366-593, gnl|rn3|chr4 (69913195-69914031) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-119, gnl|bosTau2|chr4 (59370003-59369886) | |
| 2-119, gnl|canFam2|chr16 (9477009-9476791) | |
| 2-119, gnl|dasNov1|scaffold_28531 (3252-3485) | |
| 2-119, gnl|echTel1|scaffold_14954 (998-1193) | |
| 2-119, gnl|hg17|chr7 (142346006-142346237) | |
| 2-119, gnl|Hg17|chr7 (142346019-142346138) | |
| 2-119, gnl|loxAfr1|scaffold_62022 (1157-1373) | |
| 2-119, gnl|mm7|chr6 (41786432-41786647) | |
| 2-119, gnl|Mm7|chr6 (41786445-41786549) | |
| 2-119, gnl|oryCun1|scaffold_174673 (2535-2295) | |
| 2-119, gnl|panTro1|chr6 (145143538-145143769) | |
| 2-119, gnl|rheMac2|chr3 (180781263-180781496) | |
| 2-119, gnl|rn3|chr4 (69909588-69909805) | |
| 366-593, gnl|bosTau2|chr4 (59360122-59359890) | |
| 366-593, gnl|canFam2|chr16 (9471063-9470144) | |
| 366-593, gnl|dasNov1|scaffold_122477 (4304-3396) | |
| 366-593, gnl|echTel1|scaffold_17746 (1637-2445) | |
| 366-593, gnl|hg17|chr7 (142352915-142353808) | |
| 366-593, gnl|Hg17|chr7 (142353458-142353669) | |
| 366-593, gnl|loxAfr1|scaffold_5525 (51668-52535) | |
| 366-593, gnl|mm7|chr6 (41790247-41791090) | |
| 366-593, gnl|Mm7|chr6 (41790733-41790946) | |
| 366-593, gnl|oryCun1|scaffold_81540 (2112-2974) | |
| 366-593, gnl|panTro1|chr6 (145150494-145151383) | |
| 366-593, gnl|rheMac2|chr3 (180788537-180789431) | |
| 366-593, gnl|rn3|chr4 (69913195-69914031) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| pty (6.70758) | |
| fli (0.202881) | |
| col (0.195008) | |
| cmu (0.186393) | |
| nep (0.183925) | |
| lyg (0.133103) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (6.70758) | |
| fli (0.202881) | |
| col (0.195008) | |
| cmu (0.186393) | |
| nep (0.183925) | |
| lyg (0.133103) |