Non-Coding RNA Search

Ss1.1-Mixn-0030b03.5

Sequence:


               
               GGTGGGCTCCGGGGGGGCTCCTCCCTTGGGGCTGGAGACTGGCCACAGCTTGGTGGGGTG
AATCGAAGACCTCAGGGGTGGAGAGAGCCCAAAGGGCCTCGGCCACACAGGGTGGCCTTC
AGGGAAGGCAGGCGCGGGGCGTGGTGGAGGGCAACAGGTGCTGGTGCGGCAGGGAGGCGG
CACAGGGAATGGGTGACAGGAGTGGGGTCCGTGGGGCCCAGGGAGGCAGGGATTGAGGGT
GCAGGGAGTGGATGTATGGGTTTGAGAATGTGTGACAGGGACAGAGGTGGGGCAGGCCGA
GGGCTGGGCGTGTGGAGGTGGTCACGCCCTTGCAGTGGCCCTGAGCGCCCCTCGACTCAC
CCAGAGCTGGCCAGTCCCCAGCCCACCCTGAGGCCCCGGGCCCCAGCATCCCCGGGGTTC
TGCGCAGCAGCCAGAGCGAGCGGGAGGGGGTGTGTTTCCTTTTTGTTGGTGATGCATGCA
AATCAAGTGGACAACGAAACAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGGCTCCGGGGGGGCTCCTCCCTTGGGGCTGGAGACTGGCCACAGCTTGGTGGGGTG
AATCGAAGACCTCAGGGGTGGAGAGAGCCCAAAGGGCCTCGGCCACACAGGGTGGCCTTC
AGGGAAGGCAGGCGCGGGGCGTGGTGGAGGGCAACAGGTGCTGGTGCGGCAGGGAGGCGG
CACAGGGAATGGGTGACAGGAGTGGGGTCCGTGGGGCCCAGGGAGGCAGGGATTGAGGGT
GCAGGGAGTGGATGTATGGGTTTGAGAATGTGTGACAGGGACAGAGGTGGGGCAGGCCGA
GGGCTGGGCGTGTGGAGGTGGTCACGCCCTTGCAGTGGCCCTGAGCGCCCCTCGACTCAC
CCAGAGCTGGCCAGTCCCCAGCCCACCCTGAGGCCCCGGGCCCCAGCATCCCCGGGGTTC
TGCGCAGCAGCCAGAGCGAGCGGGAGGGGGTGTGTTTCCTTTTTGTTGGTGATGCATGCA
AATCAAGTGGACAACGAAACAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-504, gnl|bosTau2|chr7 (13023516-13023020)
               

               
               4-504, gnl|Hg17|chr19 (7884155-7884636)
               

               
               4-504, gnl|Mm7|chr8 (4210962-4211460)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-504, gnl|bosTau2|chr7 (13023516-13023020)
               

               
               4-504, gnl|Hg17|chr19 (7884155-7884636)
               

               
               4-504, gnl|Mm7|chr8 (4210962-4211460)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               ece (0.229305)
               

               
               hlv (0.139256)
               

               
               nca (0.136874)
               

               
               jca (0.11396)
               

               
               jej (0.0989218)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               hlv (0.139256)
               

               
               nca (0.136874)
               

               
               jca (0.11396)
               

               
               jej (0.0989218)

	4-504, gnl\|bosTau2\|chr7 (13023516-13023020)
	4-504, gnl\|Hg17\|chr19 (7884155-7884636)
	4-504, gnl\|Mm7\|chr8 (4210962-4211460)

	ece (0.229305)
	hlv (0.139256)
	nca (0.136874)
	jca (0.11396)
	jej (0.0989218)