Non-Coding RNA Search

Ss1.1-Mixn-0030e19.5

Sequence:


               
               TGGAGGCCCAGTTCCGGAGGCTGCAGGAGGAGCTGGAGGGCCAGGGCCTGTGCTCGGCGC
TCCCCGGGCTGCGCGGCTGCGGCGACATCGGTGCCATCCCGCTGCCCAAGCTGCACTCGC
TGCAGAGTCAGCTGCGTCTGGACCTGGAAGCCCTTGACGGGGTGATCTTCCAGGTCCGAT
CGAAGCAGTGCGTGGTGTGCGGGGAGCAGGCCCGCGGCACCGTCCTGCGGCCCTGCCAGC
ACCACGTGCTCTGCGAGGCGTGCGCTGCCGGCGCGCCCGAGTGCCCCTACTGCGCGGGCC
AGCCCCTGCCATGGTGACAGCCGCCGCCTCACCCACCGGTGCCACCGAGGTCGGGACCCC
GGCCCATCCACCCACCCGCGGTCTCGTGCTCTCGTCGCCAACCCAGCAGCCCTGCGCGGC
CCGCCAGCAGGGGACTTCGCGGGCGTGTGCGCCAAGCGCCGTGACCGGATCCTGGGGGGT
CGCGGTCGAGAAGCACTTTGCAGCCTGAGGAGTTTGGGCGGACCGTCCGAGTTGCTATGA
GCTGCTTTTAGGTTCGTGTTTTTAACATACGGTGACATGAAGCTTTACACGTGTACTGTG
AACGTGTGTCATCCGGTCTTTTAGTCCATAGTCCGTATGTGTTTTCGGGTCACATTCTGA
AGTTAGCCTTTGGAAGCGAGCGTTGATCTGGTGAGAAATGCTTAGATAGGAGTTGGACCG
TTTTCAAATGAAGTGCAAACCCATAGTGTTTCTAGCAGAGGGACTATCACGGGACGCGCC
CCTGCAGGCGGTTTTAACTCTCCCAACACGGCCCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAGGCCCAGTTCCGGAGGCTGCAGGAGGAGCTGGAGGGCCAGGGCCTGTGCTCGGCGC
TCCCCGGGCTGCGCGGCTGCGGCGACATCGGTGCCATCCCGCTGCCCAAGCTGCACTCGC
TGCAGAGTCAGCTGCGTCTGGACCTGGAAGCCCTTGACGGGGTGATCTTCCAGGTCCGAT
CGAAGCAGTGCGTGGTGTGCGGGGAGCAGGCCCGCGGCACCGTCCTGCGGCCCTGCCAGC
ACCACGTGCTCTGCGAGGCGTGCGCTGCCGGCGCGCCCGAGTGCCCCTACTGCGCGGGCC
AGCCCCTGCCATGGTGACAGCCGCCGCCTCACCCACCGGTGCCACCGAGGTCGGGACCCC
GGCCCATCCACCCACCCGCGGTCTCGTGCTCTCGTCGCCAACCCAGCAGCCCTGCGCGGC
CCGCCAGCAGGGGACTTCGCGGGCGTGTGCGCCAAGCGCCGTGACCGGATCCTGGGGGGT
CGCGGTCGAGAAGCACTTTGCAGCCTGAGGAGTTTGGGCGGACCGTCCGAGTTGCTATGA
GCTGCTTTTAGGTTCGTGTTTTTAACATACGGTGACATGAAGCTTTACACGTGTACTGTG
AACGTGTGTCATCCGGTCTTTTAGTCCATAGTCCGTATGTGTTTTCGGGTCACATTCTGA
AGTTAGCCTTTGGAAGCGAGCGTTGATCTGGTGAGAAATGCTTAGATAGGAGTTGGACCG
TTTTCAAATGAAGTGCAAACCCATAGTGTTTCTAGCAGAGGGACTATCACGGGACGCGCC
CCTGCAGGCGGTTTTAACTCTCCCAACACGGCCCGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|5912549|emb|CAB56185.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|5912549|emb|CAB56185.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               161-767, gnl|bosTau2|chr25 (699396-700014)
               

               
               161-767, gnl|Hg17|chr16 (1356398-1355589)
               

               
               161-767, gnl|Mm7|chr17 (23414802-23415540)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-767, gnl|bosTau2|chr25 (699396-700014)
               

               
               161-767, gnl|Hg17|chr16 (1356398-1355589)
               

               
               161-767, gnl|Mm7|chr17 (23414802-23415540)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	161-767, gnl\|bosTau2\|chr25 (699396-700014)
	161-767, gnl\|Hg17\|chr16 (1356398-1355589)
	161-767, gnl\|Mm7\|chr17 (23414802-23415540)