Ss1.1-Mixn-0030p12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAAGAAGAAGTATCTCCAGAGGCAGTTGGTGTGACCAGTCAGCGACCAGTGTTTTGTC CTTATCATAGAAAGGAGCAGCTGAAGCTTTACTGTGAAACATGTGACAAACTGACGTGTC GGGACTGCCAGTTATTAGACNATAAAGAGCATAGATACCAATTTATAGAAGAAGCTTTTC AGAATCAGAAAGTGATCATAGATACACTAATCACGAAACTGATGGAAAAAACAAAATACA TAAAGTTTACAGGAAATCAAATCCAAAACAGGATAATTGAAGTAAATCAAAATCAGAAGC AGGTGGAACAGGATATTAAAGTTGCCATATTTACCTTGATGGTAGAAATAAATAAAAAAG GAAAAGCTCTTCTGCATCAGCTTGAGAGTCTTGCAAAGGATCATCGAATGAAGCTTATGC AACAGCAGCAGGAAGTGGCTGGACTTTCCAAACAGTTGGAACATGTCATGCATTTTTCCA AATGGGCAGTTTCCAGTGGCAGCAGTACAGCGTTACTTTATAGCAAGCGACTGATTACAT ACCGGTTACGGCATCTCCTTCGAGCAAGGTGTGATGCTTCCCCAGTGACCAACAATACCA TCCAGTTTCACTGTGATCCTAGTTTCTGGGCTCAAAATATTATCAATCTAGGTTCTTTAG TAATCGAAGACAAAGAGAGTCAACCACAAATGCCTAAGCAGAATCCTGTCGTGGAACAGA ATTCACAGCCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAAGAAGAAGTATCTCCAGAGGCAGTTGGTGTGACCAGTCAGCGACCAGTGTTTTGTC CTTATCATAGAAAGGAGCAGCTGAAGCTTTACTGTGAAACATGTGACAAACTGACGTGTC GGGACTGCCAGTTATTAGACNATAAAGAGCATAGATACCAATTTATAGAAGAAGCTTTTC AGAATCAGAAAGTGATCATAGATACACTAATCACGAAACTGATGGAAAAAACAAAATACA TAAAGTTTACAGGAAATCAAATCCAAAACAGGATAATTGAAGTAAATCAAAATCAGAAGC AGGTGGAACAGGATATTAAAGTTGCCATATTTACCTTGATGGTAGAAATAAATAAAAAAG GAAAAGCTCTTCTGCATCAGCTTGAGAGTCTTGCAAAGGATCATCGAATGAAGCTTATGC AACAGCAGCAGGAAGTGGCTGGACTTTCCAAACAGTTGGAACATGTCATGCATTTTTCCA AATGGGCAGTTTCCAGTGGCAGCAGTACAGCGTTACTTTATAGCAAGCGACTGATTACAT ACCGGTTACGGCATCTCCTTCGAGCAAGGTGTGATGCTTCCCCAGTGACCAACAATACCA TCCAGTTTCACTGTGATCCTAGTTTCTGGGCTCAAAATATTATCAATCTAGGTTCTTTAG TAATCGAAGACAAAGAGAGTCAACCACAAATGCCTAAGCAGAATCCTGTCGTGGAACAGA ATTCACAGCCAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 12-158, gnl|bosTau2|chr4 (60338250-60338104) | |
| 12-158, gnl|canFam2|chr16 (13043877-13043727) | |
| 12-158, gnl|danRer3|chr8 (3556192-3556331) | |
| 12-158, gnl|dasNov1|scaffold_86339 (3435-3585) | |
| 12-158, gnl|echTel1|scaffold_176778 (3948-3798) | |
| 12-158, gnl|fr1|chrUn (103365607-103365746) | |
| 12-158, gnl|galGal2|chr1 (53096053-53095911) | |
| 12-158, gnl|hg17|chr7 (137661183-137661333) | |
| 12-158, gnl|Hg17|chr7 (137661179-137661325) | |
| 12-158, gnl|loxAfr1|scaffold_140131 (4780-4630) | |
| 12-158, gnl|mm7|chr6 (37846085-37846235) | |
| 12-158, gnl|Mm7|chr6 (37846081-37846227) | |
| 12-158, gnl|monDom2|scaffold_22 (3985639-3985491) | |
| 12-158, gnl|oryCun1|scaffold_180466 (37540-37689) | |
| 12-158, gnl|panTro1|chr6 (140417046-140417196) | |
| 12-158, gnl|rheMac2|chr3 (176014633-176014783) | |
| 12-158, gnl|rn3|chr4 (65731797-65731945) | |
| 12-158, gnl|tetNig1|chrUn_random (117480757-117480606) | |
| 12-158, gnl|xenTro1|scaffold_332 (1146397-1146541) | |
| 382-540, gnl|bosTau2|chr4 (60327080-60326922) | |
| 382-540, gnl|canFam2|chrUn (40360283-40360454) | |
| 382-540, gnl|danRer3|chr8 (3563756-3563943) | |
| 382-540, gnl|dasNov1|scaffold_66045 (5531-5358) | |
| 382-540, gnl|echTel1|scaffold_169149 (3204-3382) | |
| 382-540, gnl|fr1|chrUn (103368475-103368650) | |
| 382-540, gnl|galGal2|chr1 (53091817-53091646) | |
| 382-540, gnl|hg17|chr7 (137680638-137680812) | |
| 382-540, gnl|Hg17|chr7 (137680652-137680810) | |
| 382-540, gnl|loxAfr1|scaffold_6810 (16865-17038) | |
| 382-540, gnl|mm7|chr6 (37862264-37862435) | |
| 382-540, gnl|Mm7|chr6 (37862275-37862433) | |
| 382-540, gnl|monDom2|scaffold_22 (3963048-3962874) | |
| 382-540, gnl|oryCun1|scaffold_180466 (49600-49774) | |
| 382-540, gnl|panTro1|chr6 (140436490-140436664) | |
| 382-540, gnl|rheMac2|chr3 (176028107-176028281) | |
| 382-540, gnl|rn3|chr4 (65747331-65747503) | |
| 382-540, gnl|tetNig1|chrUn_random (117479146-117478971) | |
| 382-540, gnl|xenTro1|scaffold_332 (1148695-1148869) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-158, gnl|bosTau2|chr4 (60338250-60338104) | |
| 12-158, gnl|canFam2|chr16 (13043877-13043727) | |
| 12-158, gnl|danRer3|chr8 (3556192-3556331) | |
| 12-158, gnl|dasNov1|scaffold_86339 (3435-3585) | |
| 12-158, gnl|echTel1|scaffold_176778 (3948-3798) | |
| 12-158, gnl|fr1|chrUn (103365607-103365746) | |
| 12-158, gnl|galGal2|chr1 (53096053-53095911) | |
| 12-158, gnl|hg17|chr7 (137661183-137661333) | |
| 12-158, gnl|Hg17|chr7 (137661179-137661325) | |
| 12-158, gnl|loxAfr1|scaffold_140131 (4780-4630) | |
| 12-158, gnl|mm7|chr6 (37846085-37846235) | |
| 12-158, gnl|Mm7|chr6 (37846081-37846227) | |
| 12-158, gnl|monDom2|scaffold_22 (3985639-3985491) | |
| 12-158, gnl|oryCun1|scaffold_180466 (37540-37689) | |
| 12-158, gnl|panTro1|chr6 (140417046-140417196) | |
| 12-158, gnl|rheMac2|chr3 (176014633-176014783) | |
| 12-158, gnl|rn3|chr4 (65731797-65731945) | |
| 12-158, gnl|tetNig1|chrUn_random (117480757-117480606) | |
| 12-158, gnl|xenTro1|scaffold_332 (1146397-1146541) | |
| 382-540, gnl|bosTau2|chr4 (60327080-60326922) | |
| 382-540, gnl|canFam2|chrUn (40360283-40360454) | |
| 382-540, gnl|danRer3|chr8 (3563756-3563943) | |
| 382-540, gnl|dasNov1|scaffold_66045 (5531-5358) | |
| 382-540, gnl|echTel1|scaffold_169149 (3204-3382) | |
| 382-540, gnl|fr1|chrUn (103368475-103368650) | |
| 382-540, gnl|galGal2|chr1 (53091817-53091646) | |
| 382-540, gnl|hg17|chr7 (137680638-137680812) | |
| 382-540, gnl|Hg17|chr7 (137680652-137680810) | |
| 382-540, gnl|loxAfr1|scaffold_6810 (16865-17038) | |
| 382-540, gnl|mm7|chr6 (37862264-37862435) | |
| 382-540, gnl|Mm7|chr6 (37862275-37862433) | |
| 382-540, gnl|monDom2|scaffold_22 (3963048-3962874) | |
| 382-540, gnl|oryCun1|scaffold_180466 (49600-49774) | |
| 382-540, gnl|panTro1|chr6 (140436490-140436664) | |
| 382-540, gnl|rheMac2|chr3 (176028107-176028281) | |
| 382-540, gnl|rn3|chr4 (65747331-65747503) | |
| 382-540, gnl|tetNig1|chrUn_random (117479146-117478971) | |
| 382-540, gnl|xenTro1|scaffold_332 (1148695-1148869) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |