Ss1.1-Mixn-0031g24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACATCGAGAGGAGGGTTCTCATCGTGGTCGTAAGAGATGCTAAAAACCTTGTACCTATG GACCCCAATGGCTTGTCAGACCCTTACGTGAAACTGAAACTGATTCCTGATCCCAAGAGC GAGAGCAAGCAGAAGACCAAAACCATCAAGTGCTCCCTCAACCCCGAGTGGAACGAGACA TTTAGATTCCAGCTGAAAGAGTCAGACAAAGACAGAAGACTGTCTGTAGAGATTTGGGAT TGGGATTTGACCAGCAGGAATGACTTCATGGGATCTTTGTCTTTTGGGATTTCCGAACTG CAGAAAGCCGGTGTTGATGGCTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTACTTC AACGTACCTGTGCCACCAGAAGGAGGGGAGGGCAATGAGGAACTGCGGCAGAAATTTGAG AGGGCCAAGATCGGTCAGGGGACCAAGACTCCCGAAGAGAAGACGACCAACACCATATCC AAGTTCGATAACAACGGGAACAGGGACCGGATGAAACTGACTGATTTTAACTTCTTGATG GTGTTGGGGAAAGGCAGCTTTGGCAAGGTCATGCTTTCCGAGCGGAAGGGCACAGATGAG CTGTACGCGGTGAAGATCCTGAAAAAGGATGTGGTGATTCAAGACGATGATGTGGAATGC ACGATGGTGGAGAAGCGGGTGCTGGCCCTGCCCGGGAAGCCGCCCTTCCTGACCCAGCTG CATTCCTGCTTCCAGACCATGGACCGCCTGTACTTTGTGATGGAGTATGTGAATGGTGGC GACCTCATGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACATCGAGAGGAGGGTTCTCATCGTGGTCGTAAGAGATGCTAAAAACCTTGTACCTATG GACCCCAATGGCTTGTCAGACCCTTACGTGAAACTGAAACTGATTCCTGATCCCAAGAGC GAGAGCAAGCAGAAGACCAAAACCATCAAGTGCTCCCTCAACCCCGAGTGGAACGAGACA TTTAGATTCCAGCTGAAAGAGTCAGACAAAGACAGAAGACTGTCTGTAGAGATTTGGGAT TGGGATTTGACCAGCAGGAATGACTTCATGGGATCTTTGTCTTTTGGGATTTCCGAACTG CAGAAAGCCGGTGTTGATGGCTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTACTTC AACGTACCTGTGCCACCAGAAGGAGGGGAGGGCAATGAGGAACTGCGGCAGAAATTTGAG AGGGCCAAGATCGGTCAGGGGACCAAGACTCCCGAAGAGAAGACGACCAACACCATATCC AAGTTCGATAACAACGGGAACAGGGACCGGATGAAACTGACTGATTTTAACTTCTTGATG GTGTTGGGGAAAGGCAGCTTTGGCAAGGTCATGCTTTCCGAGCGGAAGGGCACAGATGAG CTGTACGCGGTGAAGATCCTGAAAAAGGATGTGGTGATTCAAGACGATGATGTGGAATGC ACGATGGTGGAGAAGCGGGTGCTGGCCCTGCCCGGGAAGCCGCCCTTCCTGACCCAGCTG CATTCCTGCTTCCAGACCATGGACCGCCTGTACTTTGTGATGGAGTATGTGAATGGTGGC GACCTCATGTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 31-197, gnl|bosTau2|chr19 (50284398-50284565) | |
| 31-197, gnl|canFam2|chr9 (16854461-16854288) | |
| 31-197, gnl|danRer3|chrUn (16262511-16262687) | |
| 31-197, gnl|dasNov1|scaffold_191942 (3726-3897) | |
| 31-197, gnl|echTel1|scaffold_309221 (4513-4340) | |
| 31-197, gnl|fr1|chrUn (233173998-233173824) | |
| 31-197, gnl|galGal2|chr18 (7145425-7145254) | |
| 31-197, gnl|hg17|chr17 (62113682-62113855) | |
| 31-197, gnl|Hg17|chr17 (62113690-62113857) | |
| 31-197, gnl|loxAfr1|scaffold_37562 (19027-19200) | |
| 31-197, gnl|mm7|chr11 (108123433-108123260) | |
| 31-197, gnl|Mm7|chr11 (108123423-108123237) | |
| 31-197, gnl|monDom2|scaffold_18 (19157068-19156897) | |
| 31-197, gnl|oryCun1|scaffold_206935 (111851-111678) | |
| 31-197, gnl|panTro1|chr19 (65380687-65380860) | |
| 31-197, gnl|rheMac2|chr16 (62045439-62045612) | |
| 31-197, gnl|rn3|chr10 (97456335-97456162) | |
| 31-197, gnl|tetNig1|chr18 (1197268-1197093) | |
| 31-197, gnl|xenTro1|scaffold_1929 (25500-25672) | |
| 566-742, gnl|bosTau2|chr11 (23717984-23717808) | |
| 566-742, gnl|canFam2|chr10 (51439239-51439376) | |
| 566-742, gnl|danRer3|chr12 (22189730-22189863) | |
| 566-742, gnl|dasNov1|scaffold_901 (46033-46169) | |
| 566-742, gnl|echTel1|scaffold_306020 (96364-96227) | |
| 566-742, gnl|fr1|chrUn (61640094-61639970) | |
| 566-742, gnl|galGal2|chr3 (22743176-22743311) | |
| 566-742, gnl|hg17|chr2 (46149121-46149256) | |
| 566-742, gnl|Hg17|chr2 (46149132-46149308) | |
| 566-742, gnl|loxAfr1|scaffold_3887 (22597-22460) | |
| 566-742, gnl|mm7|chr17 (84792743-84792880) | |
| 566-742, gnl|Mm7|chr17 (84792756-84792932) | |
| 566-742, gnl|monDom2|scaffold_1 (5512162-5512299) | |
| 566-742, gnl|oryCun1|scaffold_185990 (11091-10954) | |
| 566-742, gnl|panTro1|chr12 (48030711-48030846) | |
| 566-742, gnl|rheMac2|chr13 (46128871-46129006) | |
| 566-742, gnl|rn3|chr6 (9941332-9941469) | |
| 566-742, gnl|tetNig1|chr17 (9043735-9043859) | |
| 566-742, gnl|xenTro1|scaffold_462 (9494-9621) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-197, gnl|bosTau2|chr19 (50284398-50284565) | |
| 31-197, gnl|canFam2|chr9 (16854461-16854288) | |
| 31-197, gnl|danRer3|chrUn (16262511-16262687) | |
| 31-197, gnl|dasNov1|scaffold_191942 (3726-3897) | |
| 31-197, gnl|echTel1|scaffold_309221 (4513-4340) | |
| 31-197, gnl|fr1|chrUn (233173998-233173824) | |
| 31-197, gnl|galGal2|chr18 (7145425-7145254) | |
| 31-197, gnl|hg17|chr17 (62113682-62113855) | |
| 31-197, gnl|Hg17|chr17 (62113690-62113857) | |
| 31-197, gnl|loxAfr1|scaffold_37562 (19027-19200) | |
| 31-197, gnl|mm7|chr11 (108123433-108123260) | |
| 31-197, gnl|Mm7|chr11 (108123423-108123237) | |
| 31-197, gnl|monDom2|scaffold_18 (19157068-19156897) | |
| 31-197, gnl|oryCun1|scaffold_206935 (111851-111678) | |
| 31-197, gnl|panTro1|chr19 (65380687-65380860) | |
| 31-197, gnl|rheMac2|chr16 (62045439-62045612) | |
| 31-197, gnl|rn3|chr10 (97456335-97456162) | |
| 31-197, gnl|tetNig1|chr18 (1197268-1197093) | |
| 31-197, gnl|xenTro1|scaffold_1929 (25500-25672) | |
| 566-742, gnl|bosTau2|chr11 (23717984-23717808) | |
| 566-742, gnl|canFam2|chr10 (51439239-51439376) | |
| 566-742, gnl|danRer3|chr12 (22189730-22189863) | |
| 566-742, gnl|dasNov1|scaffold_901 (46033-46169) | |
| 566-742, gnl|echTel1|scaffold_306020 (96364-96227) | |
| 566-742, gnl|fr1|chrUn (61640094-61639970) | |
| 566-742, gnl|galGal2|chr3 (22743176-22743311) | |
| 566-742, gnl|hg17|chr2 (46149121-46149256) | |
| 566-742, gnl|Hg17|chr2 (46149132-46149308) | |
| 566-742, gnl|loxAfr1|scaffold_3887 (22597-22460) | |
| 566-742, gnl|mm7|chr17 (84792743-84792880) | |
| 566-742, gnl|Mm7|chr17 (84792756-84792932) | |
| 566-742, gnl|monDom2|scaffold_1 (5512162-5512299) | |
| 566-742, gnl|oryCun1|scaffold_185990 (11091-10954) | |
| 566-742, gnl|panTro1|chr12 (48030711-48030846) | |
| 566-742, gnl|rheMac2|chr13 (46128871-46129006) | |
| 566-742, gnl|rn3|chr6 (9941332-9941469) | |
| 566-742, gnl|tetNig1|chr17 (9043735-9043859) | |
| 566-742, gnl|xenTro1|scaffold_462 (9494-9621) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |