Non-Coding RNA Search

Ss1.1-Mixn-0031h13.5

Sequence:


               
               TTTAGTTAAATCTGGTGAGGGTCAAGACTTTAAAGAAAAACCCACATCTTTATCAAATGC
AGATGTTTTGCAACAGCCAAAATCCAACTTGGAGGGATCTAGTGAAGGTTATGGGAAGAA
AGAAGTCCTAGACTATACAGAGGAGACAGACCTAAACTCAGTACTTCTTTCTGCTGATGG
TGAGGGACATCTTAGAATTCAATCTTATTCTCCCAAAGGTGAGAAATCCATTGTGGAAGA
AGCCAAAAATGTTGTTCCTCTTCATGTCACTGACAGTAAAAGACTCCAGAAACCAGAAAT
CGCCCCTCCGTCTAAATGGAATATTTCTATTATTAAGGAAGAGCCAAGAAGTGATCAAAA
AGAAAAATCACTCTTTTCATTTGATGCAGTAGATAAAGTGCCACAAAAGCCAAAATCACC
ATCATCTAGCTTTGCAATTAAAGATACCACAGAGGAATCAGAGAAGCTGGAGTCAATAAT
TTTGCCAGTAGAAGAATCTAAAGGCAATTTAATTCATCTTGATGAAGATAGACTAGAGAA
AGAAATGCCAAAACATACCTCCTTGAAATTTTCTGAAGAGGAAATAAAATTCAGATCTGT
TAGCCCAACAGAGGAGGAAGATAACTTGAGAATGAGATCATTTTCTTCAGCAGAAAAGCA
AGTTCTGGCAGAAAAACAAGAACCTGTGGCCCCATTACAGCTTAGAGGTGATAATGAAAT
AGGGAAGGCACAAATTACACATGGATTGAGCCCCGTTACACTGAAAGAAGCAAAACCTGC
TGCTGTGTGGCAGCAGGTCTGTCACAATGAAGACCACAAAGAAAGATACAAAATTATTGA
AGAGGAGAAAGAAGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGTTAAATCTGGTGAGGGTCAAGACTTTAAAGAAAAACCCACATCTTTATCAAATGC
AGATGTTTTGCAACAGCCAAAATCCAACTTGGAGGGATCTAGTGAAGGTTATGGGAAGAA
AGAAGTCCTAGACTATACAGAGGAGACAGACCTAAACTCAGTACTTCTTTCTGCTGATGG
TGAGGGACATCTTAGAATTCAATCTTATTCTCCCAAAGGTGAGAAATCCATTGTGGAAGA
AGCCAAAAATGTTGTTCCTCTTCATGTCACTGACAGTAAAAGACTCCAGAAACCAGAAAT
CGCCCCTCCGTCTAAATGGAATATTTCTATTATTAAGGAAGAGCCAAGAAGTGATCAAAA
AGAAAAATCACTCTTTTCATTTGATGCAGTAGATAAAGTGCCACAAAAGCCAAAATCACC
ATCATCTAGCTTTGCAATTAAAGATACCACAGAGGAATCAGAGAAGCTGGAGTCAATAAT
TTTGCCAGTAGAAGAATCTAAAGGCAATTTAATTCATCTTGATGAAGATAGACTAGAGAA
AGAAATGCCAAAACATACCTCCTTGAAATTTTCTGAAGAGGAAATAAAATTCAGATCTGT
TAGCCCAACAGAGGAGGAAGATAACTTGAGAATGAGATCATTTTCTTCAGCAGAAAAGCA
AGTTCTGGCAGAAAAACAAGAACCTGTGGCCCCATTACAGCTTAGAGGTGATAATGAAAT
AGGGAAGGCACAAATTACACATGGATTGAGCCCCGTTACACTGAAAGAAGCAAAACCTGC
TGCTGTGTGGCAGCAGGTCTGTCACAATGAAGACCACAAAGAAAGATACAAAATTATTGA
AGAGGAGAAAGAAGAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-862, gnl|bosTau2|chr10 (4515402-4516263)
               

               
               1-862, gnl|Hg17|chr5 (79067100-79067967)
               

               
               1-862, gnl|Mm7|chr13 (90155542-90154723)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-862, gnl|bosTau2|chr10 (4515402-4516263)
               

               
               1-862, gnl|Hg17|chr5 (79067100-79067967)
               

               
               1-862, gnl|Mm7|chr13 (90155542-90154723)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	1-862, gnl\|bosTau2\|chr10 (4515402-4516263)
	1-862, gnl\|Hg17\|chr5 (79067100-79067967)
	1-862, gnl\|Mm7\|chr13 (90155542-90154723)