Ss1.1-Mixn-0031k16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGCTGCTGTCCCTGAACACGGCCGTGTCACCTGTTTTGAACCAGCCATCCGAGGTGAAG GCGCTTCTCGTTTCTTCTGGCTGGTCCCAGTACTCCCGGAACACGGACGGCCCCCTGACC AGCAGCTCCCCCTCCTTCTCCTCGAACCCCGGGGTCACCTCAGTGTCCCTCTCGTTTCCT TCCGCATGGACGATACAGGGGCAGCCGTCCTTCTGCAGGTTTCCCGAGACAATCCGCACC TCAACGCCGGGCAGCGGGGTGCCCACGGAGCCTGGCAGGCGCGTGGTCAGCGAGTTGGAC AGGGCCATGCCAATCTCCGTCATGCCGTAGCGCTCCAGCAGCGTGTGCCCGGTGACGCCC TCCCACTTCTCCAGCACCGGCAGGGGCAGCGCGGCCGAGCCTGAGACCATCAACCTGATT TTCTCTTCGCAAACGGCGCGCACGAAATCCCGGACGTGCGGCTGGGTGAAGTGCCTGTCG TGATAGTCCATCAGCTTGCTGTAGATGGTGGGCACGGCCATGAACACGTTGACCCGGGGA GCTTCCGGACTTAAGAACTTCTCCCAAACCTGCTGGGCGCTGAACTCAGGCAGCATCACG CAGGCGGCCCCGACCCAGAGCGGACACAGCAGCTTGTTGACCAGGCCGTGGACGTGGTGC AGCGGGAGGACGTGGAGGATCACGTCGTCCTGAGTCCAGGCCCACTTGCGGACCAGCCCC GTCACCACGGCCTCGAGGTTGCGATGGGTGCTCAGAACGCCCTTGGGCCTCCCCGTGGTC CCGCTGGTGTAGATGATGGTGGCGGCTCGCTTTCTCCAGTCCCGCTCCGGCACCCGCCCC GCCCCGGGGGCCTCGGCCGCCCCCAGGTAGACCTCGGGCGAGAGAGGCAGGAGCGGGACC CCCAGCTTCCCGACCACCGGGCCCAGCACCCCCGCGTGCTCCGGGCCGGCCAGGACCACG GAGCTGCGGGAGTCCCGGATGAAGTACTCCAGCTGGGCCGGGGGGTGCTTCCGGTAGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGCTGCTGTCCCTGAACACGGCCGTGTCACCTGTTTTGAACCAGCCATCCGAGGTGAAG GCGCTTCTCGTTTCTTCTGGCTGGTCCCAGTACTCCCGGAACACGGACGGCCCCCTGACC AGCAGCTCCCCCTCCTTCTCCTCGAACCCCGGGGTCACCTCAGTGTCCCTCTCGTTTCCT TCCGCATGGACGATACAGGGGCAGCCGTCCTTCTGCAGGTTTCCCGAGACAATCCGCACC TCAACGCCGGGCAGCGGGGTGCCCACGGAGCCTGGCAGGCGCGTGGTCAGCGAGTTGGAC AGGGCCATGCCAATCTCCGTCATGCCGTAGCGCTCCAGCAGCGTGTGCCCGGTGACGCCC TCCCACTTCTCCAGCACCGGCAGGGGCAGCGCGGCCGAGCCTGAGACCATCAACCTGATT TTCTCTTCGCAAACGGCGCGCACGAAATCCCGGACGTGCGGCTGGGTGAAGTGCCTGTCG TGATAGTCCATCAGCTTGCTGTAGATGGTGGGCACGGCCATGAACACGTTGACCCGGGGA GCTTCCGGACTTAAGAACTTCTCCCAAACCTGCTGGGCGCTGAACTCAGGCAGCATCACG CAGGCGGCCCCGACCCAGAGCGGACACAGCAGCTTGTTGACCAGGCCGTGGACGTGGTGC AGCGGGAGGACGTGGAGGATCACGTCGTCCTGAGTCCAGGCCCACTTGCGGACCAGCCCC GTCACCACGGCCTCGAGGTTGCGATGGGTGCTCAGAACGCCCTTGGGCCTCCCCGTGGTC CCGCTGGTGTAGATGATGGTGGCGGCTCGCTTTCTCCAGTCCCGCTCCGGCACCCGCCCC GCCCCGGGGGCCTCGGCCGCCCCCAGGTAGACCTCGGGCGAGAGAGGCAGGAGCGGGACC CCCAGCTTCCCGACCACCGGGCCCAGCACCCCCGCGTGCTCCGGGCCGGCCAGGACCACG GAGCTGCGGGAGTCCCGGATGAAGTACTCCAGCTGGGCCGGGGGGTGCTTCCGGTAGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 155-274, gnl|bosTau2|chr18 (12365539-12365658) | |
| 155-274, gnl|canFam2|chr5 (67313811-67313630) | |
| 155-274, gnl|fr1|chrUn (95135534-95135699) | |
| 155-274, gnl|galGal2|chr11 (18907160-18906969) | |
| 155-274, gnl|hg17|chr16 (87714648-87714838) | |
| 155-274, gnl|Hg17|chr16 (87714826-87714707) | |
| 155-274, gnl|mm7|chr8 (121432955-121433104) | |
| 155-274, gnl|Mm7|chr8 (121433102-121432986) | |
| 155-274, gnl|monDom2|scaffold_23 (7444870-7444692) | |
| 155-274, gnl|oryCun1|scaffold_110655 (7290-7139) | |
| 155-274, gnl|panTro1|chr18 (82720289-82720479) | |
| 155-274, gnl|rn3|chr19 (53085710-53085852) | |
| 413-571, gnl|bosTau2|chr18 (12370545-12370703) | |
| 413-571, gnl|canFam2|chr5 (67320541-67320362) | |
| 413-571, gnl|danRer3|chrUn (175398004-175397839) | |
| 413-571, gnl|dasNov1|scaffold_29090 (11488-11320) | |
| 413-571, gnl|fr1|chrUn (95132096-95132261) | |
| 413-571, gnl|galGal2|chr11 (18912109-18911930) | |
| 413-571, gnl|hg17|chr16 (87705994-87706173) | |
| 413-571, gnl|Hg17|chr16 (87706157-87705999) | |
| 413-571, gnl|loxAfr1|scaffold_7349 (108286-108453) | |
| 413-571, gnl|mm7|chr8 (121426285-121426464) | |
| 413-571, gnl|Mm7|chr8 (121426448-121426290) | |
| 413-571, gnl|monDom2|scaffold_23 (7472793-7472623) | |
| 413-571, gnl|oryCun1|scaffold_166926 (540-710) | |
| 413-571, gnl|panTro1|chr18 (82710854-82711087) | |
| 413-571, gnl|rn3|chr19 (53079425-53079604) | |
| 413-571, gnl|tetNig1|chr5 (7681091-7680927) | |
| 413-571, gnl|xenTro1|scaffold_13 (2297837-2297999) | |
| 713-1020, gnl|bosTau2|chr18 (12374486-12374793) | |
| 713-1020, gnl|Hg17|chr16 (87695271-87694962) | |
| 713-1020, gnl|Mm7|chr8 (121422987-121422686) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 155-274, gnl|bosTau2|chr18 (12365539-12365658) | |
| 155-274, gnl|canFam2|chr5 (67313811-67313630) | |
| 155-274, gnl|fr1|chrUn (95135534-95135699) | |
| 155-274, gnl|galGal2|chr11 (18907160-18906969) | |
| 155-274, gnl|hg17|chr16 (87714648-87714838) | |
| 155-274, gnl|Hg17|chr16 (87714826-87714707) | |
| 155-274, gnl|mm7|chr8 (121432955-121433104) | |
| 155-274, gnl|Mm7|chr8 (121433102-121432986) | |
| 155-274, gnl|monDom2|scaffold_23 (7444870-7444692) | |
| 155-274, gnl|oryCun1|scaffold_110655 (7290-7139) | |
| 155-274, gnl|panTro1|chr18 (82720289-82720479) | |
| 155-274, gnl|rn3|chr19 (53085710-53085852) | |
| 413-571, gnl|bosTau2|chr18 (12370545-12370703) | |
| 413-571, gnl|canFam2|chr5 (67320541-67320362) | |
| 413-571, gnl|danRer3|chrUn (175398004-175397839) | |
| 413-571, gnl|dasNov1|scaffold_29090 (11488-11320) | |
| 413-571, gnl|fr1|chrUn (95132096-95132261) | |
| 413-571, gnl|galGal2|chr11 (18912109-18911930) | |
| 413-571, gnl|hg17|chr16 (87705994-87706173) | |
| 413-571, gnl|Hg17|chr16 (87706157-87705999) | |
| 413-571, gnl|loxAfr1|scaffold_7349 (108286-108453) | |
| 413-571, gnl|mm7|chr8 (121426285-121426464) | |
| 413-571, gnl|Mm7|chr8 (121426448-121426290) | |
| 413-571, gnl|monDom2|scaffold_23 (7472793-7472623) | |
| 413-571, gnl|oryCun1|scaffold_166926 (540-710) | |
| 413-571, gnl|panTro1|chr18 (82710854-82711087) | |
| 413-571, gnl|rn3|chr19 (53079425-53079604) | |
| 413-571, gnl|tetNig1|chr5 (7681091-7680927) | |
| 413-571, gnl|xenTro1|scaffold_13 (2297837-2297999) | |
| 713-1020, gnl|bosTau2|chr18 (12374486-12374793) | |
| 713-1020, gnl|Hg17|chr16 (87695271-87694962) | |
| 713-1020, gnl|Mm7|chr8 (121422987-121422686) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.197668) | |
| nje (0.16592) | |
| nco (0.161734) |