Ss1.1-Mixn-0031o18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGATGTCGATGACAGACTTGCTCAACGCTGAGGACATCAAGAAGGCAGTGGGGGCCTTT ACCGCTGTCGACTCCTTCGACCACAAAAAGTTCTTCCAAATGGTTGGCCTGAAGAAAAAG AGCCCAGATGATGTGAAGAAGGTATTCCACATCCTGGATAAAGACAAGAGCGGCTTCATT GAGGAGGAGGAGCTGGGATTCATTCTGAAAGGCTTCTCCCCAGATGCCAGAGACCTGTCA GAGAAAGAAACCAAGACGCTGATGGCTGCTGGAGACAAGGACGGGGATGGCAAGATTGGG GCTGACGAATTCTCCACTCTGGTGGCTGAAAGCTAAGAGGCTCTGACTGCCCGGGTCTTC CCCCTCTGGCCCCGAACACCCGATCTCAGCCCCTCTGGCCGCCTTCCTGCCTTTCTGTTC AGTTTGTTTGTGTTATTTTTTACTCCCCCATCCCTTATGGCCCCTGGATGACACCATTCT TCTGGAAAATGATGGAGAAACAATAAAGGCTGTACCAATCGGAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGATGTCGATGACAGACTTGCTCAACGCTGAGGACATCAAGAAGGCAGTGGGGGCCTTT ACCGCTGTCGACTCCTTCGACCACAAAAAGTTCTTCCAAATGGTTGGCCTGAAGAAAAAG AGCCCAGATGATGTGAAGAAGGTATTCCACATCCTGGATAAAGACAAGAGCGGCTTCATT GAGGAGGAGGAGCTGGGATTCATTCTGAAAGGCTTCTCCCCAGATGCCAGAGACCTGTCA GAGAAAGAAACCAAGACGCTGATGGCTGCTGGAGACAAGGACGGGGATGGCAAGATTGGG GCTGACGAATTCTCCACTCTGGTGGCTGAAAGCTAAGAGGCTCTGACTGCCCGGGTCTTC CCCCTCTGGCCCCGAACACCCGATCTCAGCCCCTCTGGCCGCCTTCCTGCCTTTCTGTTC AGTTTGTTTGTGTTATTTTTTACTCCCCCATCCCTTATGGCCCCTGGATGACACCATTCT TCTGGAAAATGATGGAGAAACAATAAAGGCTGTACCAATCGGAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 61-197, gnl|bosTau2|chr5 (44963074-44962938) | |
| 61-197, gnl|canFam2|chr6 (14317336-14317504) | |
| 61-197, gnl|danRer3|chr12 (12287445-12287269) | |
| 61-197, gnl|dasNov1|scaffold_33195 (13794-13630) | |
| 61-197, gnl|galGal2|chr14 (3228699-3228524) | |
| 61-197, gnl|Hg17|chr22 (35535783-35535647) | |
| 61-197, gnl|hg17|chr7 (5695353-5695521) | |
| 61-197, gnl|Mm7|chr15 (78285609-78285473) | |
| 61-197, gnl|mm7|chr5 (143052603-143052439) | |
| 61-197, gnl|monDom2|scaffold_19 (43847989-43847829) | |
| 61-197, gnl|oryCun1|scaffold_154977 (4119-4286) | |
| 61-197, gnl|panTro1|chr6 (98913246-98913078) | |
| 61-197, gnl|rheMac2|chr10 (80713883-80713730) | |
| 61-197, gnl|rn3|chr12 (10951003-10951167) | |
| 61-197, gnl|tetNig1|chr2 (3921700-3921839) | |
| 307-523, gnl|bosTau2|chr5 (44948057-44947845) | |
| 307-523, gnl|canFam2|chr10 (30746683-30746320) | |
| 307-523, gnl|dasNov1|scaffold_38904 (46364-46011) | |
| 307-523, gnl|echTel1|scaffold_187554 (2690-3017) | |
| 307-523, gnl|hg17|chr22 (35521116-35521476) | |
| 307-523, gnl|Hg17|chr22 (35521463-35521245) | |
| 307-523, gnl|loxAfr1|scaffold_90841 (131-469) | |
| 307-523, gnl|mm7|chr15 (78274312-78274660) | |
| 307-523, gnl|Mm7|chr15 (78274647-78274431) | |
| 307-523, gnl|monDom2|scaffold_34 (1490129-1489793) | |
| 307-523, gnl|oryCun1|scaffold_94565 (10614-10318) | |
| 307-523, gnl|panTro1|chr23 (35687004-35687364) | |
| 307-523, gnl|rheMac2|chr10 (80699870-80700231) | |
| 307-523, gnl|rn3|chr7 (116149159-116149499) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-197, gnl|bosTau2|chr5 (44963074-44962938) | |
| 61-197, gnl|canFam2|chr6 (14317336-14317504) | |
| 61-197, gnl|danRer3|chr12 (12287445-12287269) | |
| 61-197, gnl|dasNov1|scaffold_33195 (13794-13630) | |
| 61-197, gnl|galGal2|chr14 (3228699-3228524) | |
| 61-197, gnl|Hg17|chr22 (35535783-35535647) | |
| 61-197, gnl|hg17|chr7 (5695353-5695521) | |
| 61-197, gnl|Mm7|chr15 (78285609-78285473) | |
| 61-197, gnl|mm7|chr5 (143052603-143052439) | |
| 61-197, gnl|monDom2|scaffold_19 (43847989-43847829) | |
| 61-197, gnl|oryCun1|scaffold_154977 (4119-4286) | |
| 61-197, gnl|panTro1|chr6 (98913246-98913078) | |
| 61-197, gnl|rheMac2|chr10 (80713883-80713730) | |
| 61-197, gnl|rn3|chr12 (10951003-10951167) | |
| 61-197, gnl|tetNig1|chr2 (3921700-3921839) | |
| 307-523, gnl|bosTau2|chr5 (44948057-44947845) | |
| 307-523, gnl|canFam2|chr10 (30746683-30746320) | |
| 307-523, gnl|dasNov1|scaffold_38904 (46364-46011) | |
| 307-523, gnl|echTel1|scaffold_187554 (2690-3017) | |
| 307-523, gnl|hg17|chr22 (35521116-35521476) | |
| 307-523, gnl|Hg17|chr22 (35521463-35521245) | |
| 307-523, gnl|loxAfr1|scaffold_90841 (131-469) | |
| 307-523, gnl|mm7|chr15 (78274312-78274660) | |
| 307-523, gnl|Mm7|chr15 (78274647-78274431) | |
| 307-523, gnl|monDom2|scaffold_34 (1490129-1489793) | |
| 307-523, gnl|oryCun1|scaffold_94565 (10614-10318) | |
| 307-523, gnl|panTro1|chr23 (35687004-35687364) | |
| 307-523, gnl|rheMac2|chr10 (80699870-80700231) | |
| 307-523, gnl|rn3|chr7 (116149159-116149499) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| hyp (0.285673) | |
| fce (0.271592) | |
| fbs (0.175346) | |
| fhi (0.169578) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.285673) | |
| fce (0.271592) | |
| fbs (0.175346) | |
| fhi (0.169578) |