Ss1.1-Mixn-0031p11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATGGTGATGAGCTTGAATGTAATGTTTCCAGGTGACATGTGGGCCGTACTTACATAG CTAAAGGCCACTGATAGTTGAGAGAAGCACTTATTTGGCACTGTGGTCAGCTTTGTGACC CTGAGAGCTGTGCCCTTCCGTAAATTCACGTCAAGTGGTTGGATCATTGGCTGTTTAAGA GCTCTCTGCAGCCACACACTTTCCCTGGGTTCGCATCACTGCTGCAGAAAGCCTAACTTC CTTCTTTCAGGCTACCAGCATCCCATCTCAGCACCAGAGCCAGAATAGACCCAATGGGAA ACTGAGGTAAGGGAAGTCTCTCAAAACTACCTATTCAGGGGGCAGCATTGGCCCTGGGGC AATCTGACCATTTGGTTATTATTTGAGAAAAAAAAGTCTCATACCAATAGTGCATGTGCA AGTGGCATTGAAGGAGACCAGTGAATATTCATATGGGTCTTCATGGCCATTCCACAGAAA GGAATTGTGTCCACCCAGAACCCAGATAGTAAACTCAGGGACCCTTCTCACTGATACAGC AATGGTTTTAGGCCAAATCATAAAACTCATTGTCTGAGATGGAATGAAGGATGTTGTCTA TATTGTACTTAAAACAATTCAAGAAAAAAAAGGGGGGAGAGAAATTTGAGCAATAGAGAA TATGGAGATAGTTCAGGGTTCTCCAGATTTGAGTTGAAGGCCATGGGTACAATGACCTCT CCCTCCCACCACCAGAAAGTCCCTGGCCAGGACTGAGGCACTAAGGGGTGGCTCAGTTGG GCTTTTAGTTCATACATTCTCTATCCAAAACTTAATTGTTTGAAAGCCTCCATGTAGTTA GAGTGTGCTTTTTAATTTTTATTGTTGTTGCTGTCTCACTGTATATGGAGTATTGACCTG CATGTTTTGTTACTTAAATATTAAAGACACTGTTATCTCACAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATGGTGATGAGCTTGAATGTAATGTTTCCAGGTGACATGTGGGCCGTACTTACATAG CTAAAGGCCACTGATAGTTGAGAGAAGCACTTATTTGGCACTGTGGTCAGCTTTGTGACC CTGAGAGCTGTGCCCTTCCGTAAATTCACGTCAAGTGGTTGGATCATTGGCTGTTTAAGA GCTCTCTGCAGCCACACACTTTCCCTGGGTTCGCATCACTGCTGCAGAAAGCCTAACTTC CTTCTTTCAGGCTACCAGCATCCCATCTCAGCACCAGAGCCAGAATAGACCCAATGGGAA ACTGAGGTAAGGGAAGTCTCTCAAAACTACCTATTCAGGGGGCAGCATTGGCCCTGGGGC AATCTGACCATTTGGTTATTATTTGAGAAAAAAAAGTCTCATACCAATAGTGCATGTGCA AGTGGCATTGAAGGAGACCAGTGAATATTCATATGGGTCTTCATGGCCATTCCACAGAAA GGAATTGTGTCCACCCAGAACCCAGATAGTAAACTCAGGGACCCTTCTCACTGATACAGC AATGGTTTTAGGCCAAATCATAAAACTCATTGTCTGAGATGGAATGAAGGATGTTGTCTA TATTGTACTTAAAACAATTCAAGAAAAAAAAGGGGGGAGAGAAATTTGAGCAATAGAGAA TATGGAGATAGTTCAGGGTTCTCCAGATTTGAGTTGAAGGCCATGGGTACAATGACCTCT CCCTCCCACCACCAGAAAGTCCCTGGCCAGGACTGAGGCACTAAGGGGTGGCTCAGTTGG GCTTTTAGTTCATACATTCTCTATCCAAAACTTAATTGTTTGAAAGCCTCCATGTAGTTA GAGTGTGCTTTTTAATTTTTATTGTTGTTGCTGTCTCACTGTATATGGAGTATTGACCTG CATGTTTTGTTACTTAAATATTAAAGACACTGTTATCTCACAAAAAAA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 127-463, gnl|bosTau2|chr1 (82444408-82444065) | |
| 127-463, gnl|canFam2|chr23 (37311675-37312057) | |
| 127-463, gnl|dasNov1|scaffold_12371 (17287-17634) | |
| 127-463, gnl|echTel1|scaffold_285196 (2007-1622) | |
| 127-463, gnl|hg17|chr3 (139234286-139234674) | |
| 127-463, gnl|Hg17|chr3 (139234135-139234650) | |
| 127-463, gnl|mm7|chr9 (99334605-99334298) | |
| 127-463, gnl|Mm7|chr9 (99334610-99334300) | |
| 127-463, gnl|oryCun1|scaffold_184787 (4712-5097) | |
| 127-463, gnl|panTro1|chr2 (141489732-141490120) | |
| 127-463, gnl|rheMac2|chr2 (149803487-149803100) | |
| 127-463, gnl|rn3|chr8 (104580009-104579705) | |
| 633-941, gnl|bosTau2|chr1 (82443332-82443041) | |
| 633-941, gnl|canFam2|chr23 (37312251-37312690) | |
| 633-941, gnl|dasNov1|scaffold_12371 (17804-18215) | |
| 633-941, gnl|echTel1|scaffold_285196 (1454-1028) | |
| 633-941, gnl|hg17|chr3 (139234837-139235299) | |
| 633-941, gnl|Hg17|chr3 (139234854-139235188) | |
| 633-941, gnl|mm7|chr9 (99334143-99333669) | |
| 633-941, gnl|Mm7|chr9 (99334108-99333797) | |
| 633-941, gnl|monDom2|scaffold_24 (33123557-33124020) | |
| 633-941, gnl|oryCun1|scaffold_184787 (5241-5695) | |
| 633-941, gnl|panTro1|chr2 (141490283-141490745) | |
| 633-941, gnl|rheMac2|chr2 (149802931-149802471) | |
| 633-941, gnl|rn3|chr8 (104579554-104579106) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 127-463, gnl|bosTau2|chr1 (82444408-82444065) | |
| 127-463, gnl|canFam2|chr23 (37311675-37312057) | |
| 127-463, gnl|dasNov1|scaffold_12371 (17287-17634) | |
| 127-463, gnl|echTel1|scaffold_285196 (2007-1622) | |
| 127-463, gnl|hg17|chr3 (139234286-139234674) | |
| 127-463, gnl|Hg17|chr3 (139234135-139234650) | |
| 127-463, gnl|mm7|chr9 (99334605-99334298) | |
| 127-463, gnl|Mm7|chr9 (99334610-99334300) | |
| 127-463, gnl|oryCun1|scaffold_184787 (4712-5097) | |
| 127-463, gnl|panTro1|chr2 (141489732-141490120) | |
| 127-463, gnl|rheMac2|chr2 (149803487-149803100) | |
| 127-463, gnl|rn3|chr8 (104580009-104579705) | |
| 633-941, gnl|bosTau2|chr1 (82443332-82443041) | |
| 633-941, gnl|canFam2|chr23 (37312251-37312690) | |
| 633-941, gnl|dasNov1|scaffold_12371 (17804-18215) | |
| 633-941, gnl|echTel1|scaffold_285196 (1454-1028) | |
| 633-941, gnl|hg17|chr3 (139234837-139235299) | |
| 633-941, gnl|Hg17|chr3 (139234854-139235188) | |
| 633-941, gnl|mm7|chr9 (99334143-99333669) | |
| 633-941, gnl|Mm7|chr9 (99334108-99333797) | |
| 633-941, gnl|monDom2|scaffold_24 (33123557-33124020) | |
| 633-941, gnl|oryCun1|scaffold_184787 (5241-5695) | |
| 633-941, gnl|panTro1|chr2 (141490283-141490745) | |
| 633-941, gnl|rheMac2|chr2 (149802931-149802471) | |
| 633-941, gnl|rn3|chr8 (104579554-104579106) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cst (0.840218) | |
| sto (0.719295) | |
| liv (0.292569) | |
| cov (0.132153) | |
| clu (0.119646) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.840218) | |
| sto (0.719295) | |
| liv (0.292569) | |
| cov (0.132153) | |
| clu (0.119646) |