Ss1.1-Mixn-0032g17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGATCACAAGAAGCCTGAAAATGAAGCCTGAAGTGAAGTATTCAACCACCAAAATTTC CACAGCAAAGATGAATAGCTCAGCCGGCAAAGTCTCGATAAAATCTCCCAAGTTGAGAAA ATCCCAACAGAAGGCTAAAGAAGTCTGTCAGATGTACTTTATGCAGCTTCGCTCTGGCCT TATCATAGAAAAGAAGGCCTGTTACTTTGGGAAAGAAACCACCAAAAGGCATTCACCAAC AAAAGGTAAAAAATGCAAAAAGCAACCTCTGGTACTTGCTGCCTGTCAGCAGCAACTAGG ACACCTTGAACGGTCTGTGGAGGGCTTCACCTTTACTAATACTATGGTCCAGAAATATAC CACAGCAACTAATCTTCTAAGTATCAAAGAACATTCTGCTTCTCTCAGTACATATAACGA TCAATACATTACTTTACTTTTTGAGGATGGAAGTTATGAGATCTATGTTGAAGACTTGAG AAAAGACCAAGAGAAAGATAAGGTGTTACTCCGTTATTTAAGGGAAATATAATGTTTGGT ATACTCTGTAATGTTTTCCTTATTATGTATAAAAATATTATTTTGTAATCCTTTAGTTCT GTTTTTTATTTTCCTCTGTATCACTGCATATTCAATACAAGTATTAGTATATTAAATAGC ATATCAGTAAAGAGACTCACTAAGATTATGAAGATATACAGCCTAACTTTTATTTTTTCT ATTTTCAGTCCAGAAATAATTTCATATTTAGAGCTGAGACCTCTGGAGAGAAGCAAGGGC CTTATCCTCAGTCTCACTTTACGTAAGGATACATTTTAAAGAGCTGCATAGGGACATAAT TTTCCCTGGTTCCAAACAATAGCCTCAAACACTAGAGTTGCTAATAAAAAGATAATTGGA AATTACACAGATTGAACACTTCACAACTGGAATCAAAGACCAAGTTTGTAAATACTTGAA ACTTCAGATGCCTATATGGCTAGGCAGGTAATAATTTAGGAAAATTATTTAAAAATTAGG AAAAATAAATCAAGTATTTTAGAAGTTAATAATTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGATCACAAGAAGCCTGAAAATGAAGCCTGAAGTGAAGTATTCAACCACCAAAATTTC CACAGCAAAGATGAATAGCTCAGCCGGCAAAGTCTCGATAAAATCTCCCAAGTTGAGAAA ATCCCAACAGAAGGCTAAAGAAGTCTGTCAGATGTACTTTATGCAGCTTCGCTCTGGCCT TATCATAGAAAAGAAGGCCTGTTACTTTGGGAAAGAAACCACCAAAAGGCATTCACCAAC AAAAGGTAAAAAATGCAAAAAGCAACCTCTGGTACTTGCTGCCTGTCAGCAGCAACTAGG ACACCTTGAACGGTCTGTGGAGGGCTTCACCTTTACTAATACTATGGTCCAGAAATATAC CACAGCAACTAATCTTCTAAGTATCAAAGAACATTCTGCTTCTCTCAGTACATATAACGA TCAATACATTACTTTACTTTTTGAGGATGGAAGTTATGAGATCTATGTTGAAGACTTGAG AAAAGACCAAGAGAAAGATAAGGTGTTACTCCGTTATTTAAGGGAAATATAATGTTTGGT ATACTCTGTAATGTTTTCCTTATTATGTATAAAAATATTATTTTGTAATCCTTTAGTTCT GTTTTTTATTTTCCTCTGTATCACTGCATATTCAATACAAGTATTAGTATATTAAATAGC ATATCAGTAAAGAGACTCACTAAGATTATGAAGATATACAGCCTAACTTTTATTTTTTCT ATTTTCAGTCCAGAAATAATTTCATATTTAGAGCTGAGACCTCTGGAGAGAAGCAAGGGC CTTATCCTCAGTCTCACTTTACGTAAGGATACATTTTAAAGAGCTGCATAGGGACATAAT TTTCCCTGGTTCCAAACAATAGCCTCAAACACTAGAGTTGCTAATAAAAAGATAATTGGA AATTACACAGATTGAACACTTCACAACTGGAATCAAAGACCAAGTTTGTAAATACTTGAA ACTTCAGATGCCTATATGGCTAGGCAGGTAATAATTTAGGAAAATTATTTAAAAATTAGG AAAAATAAATCAAGTATTTTAGAAGTTAATAATTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 6-119, gnl|bosTau2|chr8 (19266590-19266476) | |
| 6-119, gnl|canFam2|chr11 (30261751-30261921) | |
| 6-119, gnl|dasNov1|scaffold_33634 (38598-38421) | |
| 6-119, gnl|echTel1|scaffold_317017 (30546-30715) | |
| 6-119, gnl|hg17|chr9 (6231647-6231816) | |
| 6-119, gnl|Hg17|chr9 (6231677-6231785) | |
| 6-119, gnl|loxAfr1|scaffold_138727 (541-364) | |
| 6-119, gnl|mm7|chr19 (29649467-29649629) | |
| 6-119, gnl|Mm7|chr19 (29649497-29649611) | |
| 6-119, gnl|panTro1|chr11 (6156281-6156449) | |
| 6-119, gnl|rn3|chr1 (233838586-233838756) | |
| 120-241, gnl|bosTau2|chr8 (19255194-19255073) | |
| 120-241, gnl|canFam2|chr11 (30267856-30268103) | |
| 120-241, gnl|dasNov1|scaffold_178384 (6933-6701) | |
| 120-241, gnl|echTel1|scaffold_317017 (33920-34179) | |
| 120-241, gnl|hg17|chr9 (6240457-6240695) | |
| 120-241, gnl|Hg17|chr9 (6240474-6240598) | |
| 120-241, gnl|mm7|chr19 (29651806-29652088) | |
| 120-241, gnl|Mm7|chr19 (29651820-29651944) | |
| 120-241, gnl|oryCun1|scaffold_202780 (149853-150079) | |
| 120-241, gnl|panTro1|chr11 (6165088-6165326) | |
| 120-241, gnl|rheMac2|chr15 (70886986-70886753) | |
| 120-241, gnl|rn3|chr1 (233841282-233841528) | |
| 375-534, gnl|bosTau2|chr8 (19253309-19253152) | |
| 375-534, gnl|canFam2|chr11 (30269765-30270033) | |
| 375-534, gnl|dasNov1|scaffold_178384 (3764-3517) | |
| 375-534, gnl|echTel1|scaffold_317017 (36065-36336) | |
| 375-534, gnl|hg17|chr9 (6242778-6243038) | |
| 375-534, gnl|Hg17|chr9 (6242869-6243025) | |
| 375-534, gnl|loxAfr1|scaffold_48374 (4556-4834) | |
| 375-534, gnl|mm7|chr19 (29654292-29654555) | |
| 375-534, gnl|Mm7|chr19 (29654390-29654543) | |
| 375-534, gnl|oryCun1|scaffold_202780 (151707-151962) | |
| 375-534, gnl|panTro1|chr11 (6167387-6167647) | |
| 375-534, gnl|rheMac2|chr15 (70884720-70884460) | |
| 375-534, gnl|rn3|chr1 (233843750-233844011) | |
| 874-1056, gnl|bosTau2|chr8 (19248037-19247841) | |
| 874-1056, gnl|Hg17|chr9 (6246606-6246847) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-119, gnl|bosTau2|chr8 (19266590-19266476) | |
| 6-119, gnl|canFam2|chr11 (30261751-30261921) | |
| 6-119, gnl|dasNov1|scaffold_33634 (38598-38421) | |
| 6-119, gnl|echTel1|scaffold_317017 (30546-30715) | |
| 6-119, gnl|hg17|chr9 (6231647-6231816) | |
| 6-119, gnl|Hg17|chr9 (6231677-6231785) | |
| 6-119, gnl|loxAfr1|scaffold_138727 (541-364) | |
| 6-119, gnl|mm7|chr19 (29649467-29649629) | |
| 6-119, gnl|Mm7|chr19 (29649497-29649611) | |
| 6-119, gnl|panTro1|chr11 (6156281-6156449) | |
| 6-119, gnl|rn3|chr1 (233838586-233838756) | |
| 120-241, gnl|bosTau2|chr8 (19255194-19255073) | |
| 120-241, gnl|canFam2|chr11 (30267856-30268103) | |
| 120-241, gnl|dasNov1|scaffold_178384 (6933-6701) | |
| 120-241, gnl|echTel1|scaffold_317017 (33920-34179) | |
| 120-241, gnl|hg17|chr9 (6240457-6240695) | |
| 120-241, gnl|Hg17|chr9 (6240474-6240598) | |
| 120-241, gnl|mm7|chr19 (29651806-29652088) | |
| 120-241, gnl|Mm7|chr19 (29651820-29651944) | |
| 120-241, gnl|oryCun1|scaffold_202780 (149853-150079) | |
| 120-241, gnl|panTro1|chr11 (6165088-6165326) | |
| 120-241, gnl|rheMac2|chr15 (70886986-70886753) | |
| 120-241, gnl|rn3|chr1 (233841282-233841528) | |
| 375-534, gnl|bosTau2|chr8 (19253309-19253152) | |
| 375-534, gnl|canFam2|chr11 (30269765-30270033) | |
| 375-534, gnl|dasNov1|scaffold_178384 (3764-3517) | |
| 375-534, gnl|echTel1|scaffold_317017 (36065-36336) | |
| 375-534, gnl|hg17|chr9 (6242778-6243038) | |
| 375-534, gnl|Hg17|chr9 (6242869-6243025) | |
| 375-534, gnl|loxAfr1|scaffold_48374 (4556-4834) | |
| 375-534, gnl|mm7|chr19 (29654292-29654555) | |
| 375-534, gnl|Mm7|chr19 (29654390-29654543) | |
| 375-534, gnl|oryCun1|scaffold_202780 (151707-151962) | |
| 375-534, gnl|panTro1|chr11 (6167387-6167647) | |
| 375-534, gnl|rheMac2|chr15 (70884720-70884460) | |
| 375-534, gnl|rn3|chr1 (233843750-233844011) | |
| 874-1056, gnl|bosTau2|chr8 (19248037-19247841) | |
| 874-1056, gnl|Hg17|chr9 (6246606-6246847) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) |