Ss1.1-Mixn-0032m09.5
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CTGCCTGGGGCCAGAGCAAGTGCCACAAGTGCCNCCAGCTGCAGTACACAGGGGTGCAGA
AGCCAGGGCCTGTACGTGGGGAGGTGGGCGCTGACTGCCCCCAGGGCTACAAGAGGCTGA
ACAGCACCCACTGCCAGGACATCAACGAGTGCGCGATGCCAGGCATGTGCCGCCATGGTG
ACTGCCTCAACAACCCTGGTTCCTATCGCTGTGTCTGCCCACCTGGCCATAGCTTGGGGC
CCTCCCGCACACAATGCATTGCAGACAAGCCGGAGGAGAAGAGCTTGTGTTTCCGCCTGG
TGAGCCCTGAGCACCAGTGCCAGCACCCGCTGACCACGCGCCTCACCCGCCAGCTCTGCT
GCTGCAGCGTGGGCAAGGCCTGGGGTGCCAGGTGCCAGCGCTGCCCGGCTGATGGCACTG
CTGCCTTCAAGGAGATCTGCCCAGCTGGGAAGGGGTACCACATCCTCACCTCCCACCAGA
CGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCTGATGGGCCACCCA
AGCCCCAGCAGCTCCCTGAGAGCCCCAGCCGGGCACCACCACCTGAGGACACAGAGGAAG
AGAGAGGGGTGAGCACAGACTCACCAGTGGTTGAAGAGCACTCAGCGCAGCAGAGCCACC
CGACTGTCACCACATCTCCTGCCCGGCCCTACCCTGAGCTGATCTCCCGGCCCTCGCCGC
CCCGGTTCCTGCCCGACTTGCCCCCATCCCGCAGTGCGGTAGAGATCGCCCCTACTCAGG
TCACAGAGACAGACGAGTGCCGATTGAACCAGAACATTTGCGGCCATGGAGAGTGCGTCC
CCGGCCCCTCGGACTATTCCTGCCATTGCAACCCAGGTTACCGGTCGCACCCGCAGCACC
GCTACTGTGTGGATGTAAACGAGTGCGAGGCTGAGCCGTGCGGCGCCGGGAGGGGCATCT
GCATGAACACCGGTGGCTCCTACAATTGCCACTGCAACCGCGGTTACCGCCTGCACGTCG
GCGCCGGGGGGCGCTCGTGCGTGGACCTGAACGAGTGCTCCAAGCCCCATCTGTGCGGCG
ACGGCGGCTTCTGCATCAACTTTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCTACC
GGCTCAAAGCCTCCCGACCGCCCGTGTGCGAAGACATCGACGAGTGCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTGCCTGGGGCCAGAGCAAGTGCCACAAGTGCCNCCAGCTGCAGTACACAGGGGTGCAGA
AGCCAGGGCCTGTACGTGGGGAGGTGGGCGCTGACTGCCCCCAGGGCTACAAGAGGCTGA
ACAGCACCCACTGCCAGGACATCAACGAGTGCGCGATGCCAGGCATGTGCCGCCATGGTG
ACTGCCTCAACAACCCTGGTTCCTATCGCTGTGTCTGCCCACCTGGCCATAGCTTGGGGC
CCTCCCGCACACAATGCATTGCAGACAAGCCGGAGGAGAAGAGCTTGTGTTTCCGCCTGG
TGAGCCCTGAGCACCAGTGCCAGCACCCGCTGACCACGCGCCTCACCCGCCAGCTCTGCT
GCTGCAGCGTGGGCAAGGCCTGGGGTGCCAGGTGCCAGCGCTGCCCGGCTGATGGCACTG
CTGCCTTCAAGGAGATCTGCCCAGCTGGGAAGGGGTACCACATCCTCACCTCCCACCAGA
CGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCTGATGGGCCACCCA
AGCCCCAGCAGCTCCCTGAGAGCCCCAGCCGGGCACCACCACCTGAGGACACAGAGGAAG
AGAGAGGGGTGAGCACAGACTCACCAGTGGTTGAAGAGCACTCAGCGCAGCAGAGCCACC
CGACTGTCACCACATCTCCTGCCCGGCCCTACCCTGAGCTGATCTCCCGGCCCTCGCCGC
CCCGGTTCCTGCCCGACTTGCCCCCATCCCGCAGTGCGGTAGAGATCGCCCCTACTCAGG
TCACAGAGACAGACGAGTGCCGATTGAACCAGAACATTTGCGGCCATGGAGAGTGCGTCC
CCGGCCCCTCGGACTATTCCTGCCATTGCAACCCAGGTTACCGGTCGCACCCGCAGCACC
GCTACTGTGTGGATGTAAACGAGTGCGAGGCTGAGCCGTGCGGCGCCGGGAGGGGCATCT
GCATGAACACCGGTGGCTCCTACAATTGCCACTGCAACCGCGGTTACCGCCTGCACGTCG
GCGCCGGGGGGCGCTCGTGCGTGGACCTGAACGAGTGCTCCAAGCCCCATCTGTGCGGCG
ACGGCGGCTTCTGCATCAACTTTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCTACC
GGCTCAAAGCCTCCCGACCGCCCGTGTGCGAAGACATCGACGAGTGCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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261-423, gnl|bosTau2|chr29 (37903446-37903608) |
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261-423, gnl|canFam2|chr18 (54681422-54681246) |
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261-423, gnl|danRer3|chr5 (40136327-40136173) |
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261-423, gnl|dasNov1|scaffold_1341 (119774-119931) |
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261-423, gnl|echTel1|scaffold_177570 (1420-1240) |
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261-423, gnl|fr1|chrUn (4414679-4414857) |
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261-423, gnl|hg17|chr11 (65076288-65076464) |
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261-423, gnl|Hg17|chr11 (65076454-65076292) |
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261-423, gnl|loxAfr1|scaffold_735 (87378-87223) |
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261-423, gnl|mm7|chr19 (5642386-5642208) |
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261-423, gnl|Mm7|chr19 (5642218-5642380) |
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261-423, gnl|monDom2|scaffold_107 (3226060-3225884) |
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261-423, gnl|oryCun1|scaffold_205572 (53610-53767) |
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261-423, gnl|panTro1|chr9 (66321503-66321679) |
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261-423, gnl|rheMac2|chr14 (8871824-8871648) |
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261-423, gnl|rn3|chr1 (208528299-208528121) |
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261-423, gnl|tetNig1|chr7 (4654794-4654622) |
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261-423, gnl|xenTro1|scaffold_145 (524361-524193) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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261-423, gnl|bosTau2|chr29 (37903446-37903608) |
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261-423, gnl|canFam2|chr18 (54681422-54681246) |
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261-423, gnl|danRer3|chr5 (40136327-40136173) |
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261-423, gnl|dasNov1|scaffold_1341 (119774-119931) |
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261-423, gnl|echTel1|scaffold_177570 (1420-1240) |
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261-423, gnl|fr1|chrUn (4414679-4414857) |
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261-423, gnl|hg17|chr11 (65076288-65076464) |
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261-423, gnl|Hg17|chr11 (65076454-65076292) |
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261-423, gnl|loxAfr1|scaffold_735 (87378-87223) |
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261-423, gnl|mm7|chr19 (5642386-5642208) |
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261-423, gnl|Mm7|chr19 (5642218-5642380) |
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261-423, gnl|monDom2|scaffold_107 (3226060-3225884) |
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261-423, gnl|oryCun1|scaffold_205572 (53610-53767) |
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261-423, gnl|panTro1|chr9 (66321503-66321679) |
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261-423, gnl|rheMac2|chr14 (8871824-8871648) |
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261-423, gnl|rn3|chr1 (208528299-208528121) |
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261-423, gnl|tetNig1|chr7 (4654794-4654622) |
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261-423, gnl|xenTro1|scaffold_145 (524361-524193) |
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pla (0.267344) |
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eep (0.122564) |
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pla (0.267344) |
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eep (0.122564) |
