Ss1.1-Mixn-0032o24.5
|
CACCTCCTGGTCTCCCCACTCTGTCACTCCATCAATTCTCAGGAAATTTCTGCGGTTCTC
TCTCCCATTACTTGAAACCCTGGGTGGACAGAGGAAGGGGGAGGGCTGAGGTCGAGGGAG
GAGGTGGCAAATCAGAGACTGTCCCCTCAAGGAGGACAGTCATCACAGAGCGGCCTCACT
CTCCCAAGAGCAGCCTGAGTGCCGAAACCCGATGGAGATCCAAAGACTGGCCCAGGCTTG
GTCAAACCACCCCCATGTCACTGTCAGGACTCTAAAAGCCCCCAGTTGCAGGACTGACCC
ACCAGGGGAGGCTGAATTTAGTTCCTGTCCCAGCCCTGCCAGGCCCACCCCAGGAAACAC
CCCCCTCAGGTCCTACCTCCCTGTGGGGACCTCACAGGGGCCCCTGCTCTGCCAGGACAG
GGCTGCCTTTGCAGGGATCCCTTGTTCCGGCTGTATCTGCTCCCTGGTCCCGGACAAAGA
GCCCCAGCCGGAAGAGGGAGTGAGAGAATTCTGTTTGGCTACCAGATAAGGAAGGGGGTT
GGGTCAGGGGGGTGGGGGGACACAGAAAGAGGACCCTTCCTTTGCAGACTGCTTTTCTCT
GGTGCCAACCTCCCTCTTTCCCCCAGCTCGGAGCCTCCTCTTGTGCCCTTGATCATGCCA
GCCAATGCCACCCCCCCATCCTGGGCACAGTCACACCCTCCCATCAGTGGGAGGGCCACA
TCCTCCTACCCACTGGACCCTGGCCACTTCTCCCTCGCAGTGGGTGGGGGAGTCAAGCCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CACCTCCTGGTCTCCCCACTCTGTCACTCCATCAATTCTCAGGAAATTTCTGCGGTTCTC
TCTCCCATTACTTGAAACCCTGGGTGGACAGAGGAAGGGGGAGGGCTGAGGTCGAGGGAG
GAGGTGGCAAATCAGAGACTGTCCCCTCAAGGAGGACAGTCATCACAGAGCGGCCTCACT
CTCCCAAGAGCAGCCTGAGTGCCGAAACCCGATGGAGATCCAAAGACTGGCCCAGGCTTG
GTCAAACCACCCCCATGTCACTGTCAGGACTCTAAAAGCCCCCAGTTGCAGGACTGACCC
ACCAGGGGAGGCTGAATTTAGTTCCTGTCCCAGCCCTGCCAGGCCCACCCCAGGAAACAC
CCCCCTCAGGTCCTACCTCCCTGTGGGGACCTCACAGGGGCCCCTGCTCTGCCAGGACAG
GGCTGCCTTTGCAGGGATCCCTTGTTCCGGCTGTATCTGCTCCCTGGTCCCGGACAAAGA
GCCCCAGCCGGAAGAGGGAGTGAGAGAATTCTGTTTGGCTACCAGATAAGGAAGGGGGTT
GGGTCAGGGGGGTGGGGGGACACAGAAAGAGGACCCTTCCTTTGCAGACTGCTTTTCTCT
GGTGCCAACCTCCCTCTTTCCCCCAGCTCGGAGCCTCCTCTTGTGCCCTTGATCATGCCA
GCCAATGCCACCCCCCCATCCTGGGCACAGTCACACCCTCCCATCAGTGGGAGGGCCACA
TCCTCCTACCCACTGGACCCTGGCCACTTCTCCCTCGCAGTGGGTGGGGGAGTCAAGCCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
537-631, + strand, RNAmicro p=0.970344 |
|
377-530, + strand, RNAmicro p=0.951304 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
537-631, + strand, RNAmicro p=0.970344 |
|
377-530, + strand, RNAmicro p=0.951304 |
Human gene identifier and UTR site,
human gene reading direction
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6-279, gnl|bosTau2|chr19 (34761595-34761876) |
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6-279, gnl|Hg17|chr17 (34621523-34620918) |
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6-279, gnl|Mm7|chr11 (98146523-98146247) |
| |
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320-780, gnl|bosTau2|chr19 (34761879-34762362) |
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320-780, gnl|canFam2|chr9 (26493528-26493097) |
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320-780, gnl|hg17|chr17 (34620372-34620824) |
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320-780, gnl|Hg17|chr17 (34620915-34620462) |
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320-780, gnl|loxAfr1|scaffold_3686 (13132-12669) |
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320-780, gnl|mm7|chr11 (98145717-98146124) |
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320-780, gnl|monDom2|scaffold_18 (48192483-48192866) |
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320-780, gnl|panTro1|chr19 (37855016-37855465) |
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320-780, gnl|rheMac2|chr16 (49285187-49285633) |
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320-780, gnl|rn3|chr10 (86814329-86814742) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-279, gnl|bosTau2|chr19 (34761595-34761876) |
|
6-279, gnl|Hg17|chr17 (34621523-34620918) |
|
6-279, gnl|Mm7|chr11 (98146523-98146247) |
| |
|
320-780, gnl|bosTau2|chr19 (34761879-34762362) |
|
320-780, gnl|canFam2|chr9 (26493528-26493097) |
|
320-780, gnl|hg17|chr17 (34620372-34620824) |
|
320-780, gnl|Hg17|chr17 (34620915-34620462) |
|
320-780, gnl|loxAfr1|scaffold_3686 (13132-12669) |
|
320-780, gnl|mm7|chr11 (98145717-98146124) |
|
320-780, gnl|monDom2|scaffold_18 (48192483-48192866) |
|
320-780, gnl|panTro1|chr19 (37855016-37855465) |
|
320-780, gnl|rheMac2|chr16 (49285187-49285633) |
|
320-780, gnl|rn3|chr10 (86814329-86814742) |
