Non-Coding RNA Search

Ss1.1-Mixn-0033o23.5

Sequence:


               
               CTTGCTGAGGAGGCGAGTGAGAAGAAGTCCCATGCCCTCAGTGGAAAAGAAGCAGCGGAG
GCCGCCCTGGAGAAGGGGGATGAGAATGCTGAAAGTCACCAGTGGTATGCAGTGCTTTGT
GGTCAGCTGGCTGAGCATGAGAGCATCCAGAAGCGCATCCAGAGTGGCTTTAGCTTCAAG
GAACATGTGGACAAAGCCATTGCTCTCCAGCCAGAAAATCCCATGACTCACTTTCTCCTT
GGCAGGTGGTGCTACCAGGTCTCTCACCTGAGCTGGCTAGAAAAAAAGACTGCTACAGCC
TTGTCTGAAAGCCCTCTCAGTGCCACCGTGCAGGACGCCCTCCAGAGCTTCCTAAAGGCC
GAAGAACTGAAACCAGGATTTTCCAAAGCAGGAAGGATATATATTTCCAAGTGCTACAGA
GAACTAGGGAAAAACCCTGAAGCAAAACAGTGGGTGAAGCTGGCCCTGGAGCTGCCAGAT
GTCACTAAAGAGGGCCGCACCCAAAGCACAAGGAAGTTCCCAAGCTAGAAGTTCAATCAG
AGCTGCAACTGCCAGCCTACACCA------------------------------------
------------------------------------------------------------
------------------------------------------------GAACCAAAATTT
TTTATTTAAAATTGTTGAGGGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGCTGAGGAGGCGAGTGAGAAGAAGTCCCATGCCCTCAGTGGAAAAGAAGCAGCGGAG
GCCGCCCTGGAGAAGGGGGATGAGAATGCTGAAAGTCACCAGTGGTATGCAGTGCTTTGT
GGTCAGCTGGCTGAGCATGAGAGCATCCAGAAGCGCATCCAGAGTGGCTTTAGCTTCAAG
GAACATGTGGACAAAGCCATTGCTCTCCAGCCAGAAAATCCCATGACTCACTTTCTCCTT
GGCAGGTGGTGCTACCAGGTCTCTCACCTGAGCTGGCTAGAAAAAAAGACTGCTACAGCC
TTGTCTGAAAGCCCTCTCAGTGCCACCGTGCAGGACGCCCTCCAGAGCTTCCTAAAGGCC
GAAGAACTGAAACCAGGATTTTCCAAAGCAGGAAGGATATATATTTCCAAGTGCTACAGA
GAACTAGGGAAAAACCCTGAAGCAAAACAGTGGGTGAAGCTGGCCCTGGAGCTGCCAGAT
GTCACTAAAGAGGGCCGCACCCAAAGCACAAGGAAGTTCCCAAGCTAGAAGTTCAATCAG
AGCTGCAACTGCCAGCCTACACCA------------------------------------
------------------------------------------------------------
------------------------------------------------GAACCAAAATTT
TTTATTTAAAATTGTTGAGGGAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|38197096|gb|AAH08970.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38197096|gb|AAH08970.2|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               256-358, gnl|bosTau2|chr10 (26628787-26628685)
               

               
               256-358, gnl|Hg17|chr15 (38817219-38817117)
               

               
               256-358, gnl|Mm7|chr2 (118880302-118880200)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               256-358, gnl|bosTau2|chr10 (26628787-26628685)
               

               
               256-358, gnl|Hg17|chr15 (38817219-38817117)
               

               
               256-358, gnl|Mm7|chr2 (118880302-118880200)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	256-358, gnl\|bosTau2\|chr10 (26628787-26628685)
	256-358, gnl\|Hg17\|chr15 (38817219-38817117)
	256-358, gnl\|Mm7\|chr2 (118880302-118880200)