Non-Coding RNA Search

Ss1.1-Mixn-0034l15.5

Sequence:


               
               GAATGGCGATAGCAGTACCTGTCACATAGGAAGCATCTTTTCCAGCATGAGGAACCAGCC
ACCAACTCTCACAGGTCTCAGCCCTCTTATATGCTTCCCAGGCTTCAACTTCCCCACAGC
TGGCACCATGCTTAATTGGTGCTGTTGAGAGAGCTTGGATGAGGCTCAGACACAGAGGAG
GCTGGTTCCTAGGGTGGCCCTCAGTGGACACTCATAGATATACAGATTCATAGCCTTCCC
TGACCCAACCCTCCCAGCCTGCCTGGAACACTTCTTCCCAGTCACCTGCTGGCAACCCTA
CCTAGAGAGCCCGCATCGTTCATGCCACTGCCAACCTGGAGAGCCAGAGCCCAAAACCAG
CTTCCTTTTCTCAGACTTCCAAAACTCAGACTTCCTTTGGGATGGTCTGAATCTCTAACG
CTTGAAAAACAATAGAAGTGATGCTGAAGAAAATGTCATCTATAATCTAACCATTCAATA
TTTTCATGTGCCCATCAGACCTCGTTCAAACCCTCATGCATTTCGAGTTGTGACAGTTTT
ATAATCTGGTTTTTTTTTTCTTAACATTAGGCCACGAACAATTCTCTGTTTCGATATAGT
TTTTTGTAATGAACATTTTAGAAGACTCTGCTAGGTTGTGCGCTCATTGAAAGCATCTGA
CTCACTGCTGTGTTTCTCACTCCTTGGCAGTCAGTATGTTTGTTTAACAAATGAGAGAAT
GAATAATGTTCCATCAAGATCATGTACTGTAACTCACTCACCATTTCTCTGTTAATAAAC
ATTCACTGTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGGCGATAGCAGTACCTGTCACATAGGAAGCATCTTTTCCAGCATGAGGAACCAGCC
ACCAACTCTCACAGGTCTCAGCCCTCTTATATGCTTCCCAGGCTTCAACTTCCCCACAGC
TGGCACCATGCTTAATTGGTGCTGTTGAGAGAGCTTGGATGAGGCTCAGACACAGAGGAG
GCTGGTTCCTAGGGTGGCCCTCAGTGGACACTCATAGATATACAGATTCATAGCCTTCCC
TGACCCAACCCTCCCAGCCTGCCTGGAACACTTCTTCCCAGTCACCTGCTGGCAACCCTA
CCTAGAGAGCCCGCATCGTTCATGCCACTGCCAACCTGGAGAGCCAGAGCCCAAAACCAG
CTTCCTTTTCTCAGACTTCCAAAACTCAGACTTCCTTTGGGATGGTCTGAATCTCTAACG
CTTGAAAAACAATAGAAGTGATGCTGAAGAAAATGTCATCTATAATCTAACCATTCAATA
TTTTCATGTGCCCATCAGACCTCGTTCAAACCCTCATGCATTTCGAGTTGTGACAGTTTT
ATAATCTGGTTTTTTTTTTCTTAACATTAGGCCACGAACAATTCTCTGTTTCGATATAGT
TTTTTGTAATGAACATTTTAGAAGACTCTGCTAGGTTGTGCGCTCATTGAAAGCATCTGA
CTCACTGCTGTGTTTCTCACTCCTTGGCAGTCAGTATGTTTGTTTAACAAATGAGAGAAT
GAATAATGTTCCATCAAGATCATGTACTGTAACTCACTCACCATTTCTCTGTTAATAAAC
ATTCACTGTTTC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               153-792, gnl|bosTau2|chr22 (11376755-11376112)
               

               
               153-792, gnl|Hg17|chr3 (39280697-39280025)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               153-792, gnl|bosTau2|chr22 (11376755-11376112)
               

               
               153-792, gnl|Hg17|chr3 (39280697-39280025)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               csp (0.161186)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)
               

               
               ret (0.128733)

	153-792, gnl\|bosTau2\|chr22 (11376755-11376112)
	153-792, gnl\|Hg17\|chr3 (39280697-39280025)