Non-Coding RNA Search

Ss1.1-Mixn-0034p02.5

Sequence:


               
               GGTCCAGCCGCGCCTGGCTCTCGGCCAGCCGGAGCTGCAGCAGCGAAAGCGCAGGGGCGG
GTGCCGGCGTCTCCTCCTCACCCCAGGTCTCCCCGGCCGTCTCCCGCTGCACCACGAGCG
GAGGCAGGTCCCTCGGCGCGGCCTTCGGCTCCGGCTCCGTGTCAGAGTCGGTCTCCGCGG
CCTCGCCAGCCACCCGCAGCCCCGTGGGGCGGCCACGCGTCGGGCCCGAGGGGCCCAGGT
ACAGCTCCTCCTCCTCCGAAGACGCAGAGAGCTCCGAGTCGGTCTCGGCCGCCTCCCCCG
GCACCATCGTCTCAGGCCTCCGCAGCGGCCTCCGCCGACGACTCTGGGACGCCATGGAGC
CGAGCGGGTCACCGACGCTCCGAGCCTGCGGGATCCGCTACCCAGCTGAAGTGCGCTCTT
TACCGAGAAAGGAGGAAGGCGGCAGCCCCAACCAATAGGAGGGCAGGTTTTGCAGGTGTT
GACGGCCAATCACCTGGGCTTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCCAGCCGCGCCTGGCTCTCGGCCAGCCGGAGCTGCAGCAGCGAAAGCGCAGGGGCGG
GTGCCGGCGTCTCCTCCTCACCCCAGGTCTCCCCGGCCGTCTCCCGCTGCACCACGAGCG
GAGGCAGGTCCCTCGGCGCGGCCTTCGGCTCCGGCTCCGTGTCAGAGTCGGTCTCCGCGG
CCTCGCCAGCCACCCGCAGCCCCGTGGGGCGGCCACGCGTCGGGCCCGAGGGGCCCAGGT
ACAGCTCCTCCTCCTCCGAAGACGCAGAGAGCTCCGAGTCGGTCTCGGCCGCCTCCCCCG
GCACCATCGTCTCAGGCCTCCGCAGCGGCCTCCGCCGACGACTCTGGGACGCCATGGAGC
CGAGCGGGTCACCGACGCTCCGAGCCTGCGGGATCCGCTACCCAGCTGAAGTGCGCTCTT
TACCGAGAAAGGAGGAAGGCGGCAGCCCCAACCAATAGGAGGGCAGGTTTTGCAGGTGTT
GACGGCCAATCACCTGGGCTTCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6QNY0_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6QNY0_HUMAN

Aligned organism(s): 11 entry(ies)

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Aligned organism(s): 11 entry(ies)

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               1-365, gnl|bosTau2|chr18 (38689845-38690211)
               

               
               1-365, gnl|canFam2|chr1 (113218462-113217746)
               

               
               1-365, gnl|dasNov1|scaffold_100156 (179-967)
               

               
               1-365, gnl|hg17|chr19 (50374313-50375103)
               

               
               1-365, gnl|Hg17|chr19 (50374758-50374385)
               

               
               1-365, gnl|mm7|chr7 (17190025-17189312)
               

               
               1-365, gnl|Mm7|chr7 (17189633-17189985)
               

               
               1-365, gnl|oryCun1|scaffold_97894 (3895-3162)
               

               
               1-365, gnl|panTro1|chr20 (47516047-47516831)
               

               
               1-365, gnl|rheMac2|chr19 (51607545-51608330)
               

               
               1-365, gnl|rn3|chr1 (78939127-78938413)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-365, gnl|bosTau2|chr18 (38689845-38690211)
               

               
               1-365, gnl|canFam2|chr1 (113218462-113217746)
               

               
               1-365, gnl|dasNov1|scaffold_100156 (179-967)
               

               
               1-365, gnl|hg17|chr19 (50374313-50375103)
               

               
               1-365, gnl|Hg17|chr19 (50374758-50374385)
               

               
               1-365, gnl|mm7|chr7 (17190025-17189312)
               

               
               1-365, gnl|Mm7|chr7 (17189633-17189985)
               

               
               1-365, gnl|oryCun1|scaffold_97894 (3895-3162)
               

               
               1-365, gnl|panTro1|chr20 (47516047-47516831)
               

               
               1-365, gnl|rheMac2|chr19 (51607545-51608330)
               

               
               1-365, gnl|rn3|chr1 (78939127-78938413)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-365, gnl\|bosTau2\|chr18 (38689845-38690211)
	1-365, gnl\|canFam2\|chr1 (113218462-113217746)
	1-365, gnl\|dasNov1\|scaffold_100156 (179-967)
	1-365, gnl\|hg17\|chr19 (50374313-50375103)
	1-365, gnl\|Hg17\|chr19 (50374758-50374385)
	1-365, gnl\|mm7\|chr7 (17190025-17189312)
	1-365, gnl\|Mm7\|chr7 (17189633-17189985)
	1-365, gnl\|oryCun1\|scaffold_97894 (3895-3162)
	1-365, gnl\|panTro1\|chr20 (47516047-47516831)
	1-365, gnl\|rheMac2\|chr19 (51607545-51608330)
	1-365, gnl\|rn3\|chr1 (78939127-78938413)