Ss1.1-Mixn-0035j12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGAAGCTAGTTGCAGCTTGGTTGCAAGCTGGGCGGAAGCAGGCCCGGCGGGCGGGAGA GCGGGACGAGTTTTTAAAGCCATGGCCAGACCACCCACCCCGGGCTCAGTGATTGTCCCA GACTGGCACGAGAGCGCTGAGGGCAAGGAGTACCTGGCCTGCATCCTGCGCAAGAACCGC CGGCGTGTATTTGGGCTGCTCGAGCGACCAGTGCTGCCCCCTCCTGTGGCCGTTGACACT GCCAGCTACAAGATCTTTGTGTCTGGGAAGAGTGGCGTGGGCAAGACAGCGCTGGTAGCC AAGCTGGCTGGCTTGGAGGTGCCCGTGGTGCATCATGAAACGACTGGCATCCAGACCACC GTGGTATTTTGGCCAGCCAAGCTGCAGGCCAGCAACCGTGTCGTCATGTTCCGCTTTGAG TTCTGGGACTGCGGGGAGTCTGCGCTCAAAAAGTTCGATCACATGCTGCCGGCCTGCAAG GAGAAAGCAGACGCTTTCCTCTTCCTCTTCTCCTTCACTGACCGAGCCTCCTTTGAAGAC CTCCCTGGACAGCTGGCCCGAGTAGCAGGCGAGGCCCCTGGTGTGGTCAGGATGGTCATC GGCTCCAAATTTGACCAGTATATGCACACGGACGTGCCTGAGTGTGACCTCACAGCCTTC AGGCAGGCCTGGGAGCTGCCCCTCCTGCGAGTGAAGAGTGTGCCAGGGCGGCGACTGGCG GATGGACGCACACTGGATGGGCGGGCTGGGCTGGCCGACGTTGCCCACGTGCTCAATGGC CTGGCAGAGCAGCTGTGGCACCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGAAGCTAGTTGCAGCTTGGTTGCAAGCTGGGCGGAAGCAGGCCCGGCGGGCGGGAGA GCGGGACGAGTTTTTAAAGCCATGGCCAGACCACCCACCCCGGGCTCAGTGATTGTCCCA GACTGGCACGAGAGCGCTGAGGGCAAGGAGTACCTGGCCTGCATCCTGCGCAAGAACCGC CGGCGTGTATTTGGGCTGCTCGAGCGACCAGTGCTGCCCCCTCCTGTGGCCGTTGACACT GCCAGCTACAAGATCTTTGTGTCTGGGAAGAGTGGCGTGGGCAAGACAGCGCTGGTAGCC AAGCTGGCTGGCTTGGAGGTGCCCGTGGTGCATCATGAAACGACTGGCATCCAGACCACC GTGGTATTTTGGCCAGCCAAGCTGCAGGCCAGCAACCGTGTCGTCATGTTCCGCTTTGAG TTCTGGGACTGCGGGGAGTCTGCGCTCAAAAAGTTCGATCACATGCTGCCGGCCTGCAAG GAGAAAGCAGACGCTTTCCTCTTCCTCTTCTCCTTCACTGACCGAGCCTCCTTTGAAGAC CTCCCTGGACAGCTGGCCCGAGTAGCAGGCGAGGCCCCTGGTGTGGTCAGGATGGTCATC GGCTCCAAATTTGACCAGTATATGCACACGGACGTGCCTGAGTGTGACCTCACAGCCTTC AGGCAGGCCTGGGAGCTGCCCCTCCTGCGAGTGAAGAGTGTGCCAGGGCGGCGACTGGCG GATGGACGCACACTGGATGGGCGGGCTGGGCTGGCCGACGTTGCCCACGTGCTCAATGGC CTGGCAGAGCAGCTGTGGCACCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 180-347, gnl|bosTau2|chr2 (83634794-83634961) | |
| 180-347, gnl|Hg17|chr1 (16305579-16305412) | |
| 180-347, gnl|Mm7|chr4 (140595679-140595846) | |
| 600-804, gnl|bosTau2|chr2 (83636666-83636870) | |
| 600-804, gnl|canFam2|chr2 (84369516-84369281) | |
| 600-804, gnl|danRer3|chr6 (23368930-23368749) | |
| 600-804, gnl|dasNov1|scaffold_35092 (15703-15938) | |
| 600-804, gnl|echTel1|scaffold_237499 (2518-2282) | |
| 600-804, gnl|fr1|chrUn (102526203-102526400) | |
| 600-804, gnl|hg17|chr1 (16303884-16304119) | |
| 600-804, gnl|Hg17|chr1 (16304107-16303903) | |
| 600-804, gnl|loxAfr1|scaffold_126982 (4355-4123) | |
| 600-804, gnl|mm7|chr4 (140598494-140598259) | |
| 600-804, gnl|Mm7|chr4 (140598269-140598473) | |
| 600-804, gnl|monDom2|scaffold_109 (2780431-2780193) | |
| 600-804, gnl|oryCun1|scaffold_183886 (4047-3812) | |
| 600-804, gnl|panTro1|chr1 (16468726-16468961) | |
| 600-804, gnl|rheMac2|chr1 (19036677-19036912) | |
| 600-804, gnl|rn3|chr5 (160086633-160086398) | |
| 600-804, gnl|tetNig1|chr11 (4597792-4597596) | |
| 600-804, gnl|xenTro1|scaffold_2297 (18536-18763) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 180-347, gnl|bosTau2|chr2 (83634794-83634961) | |
| 180-347, gnl|Hg17|chr1 (16305579-16305412) | |
| 180-347, gnl|Mm7|chr4 (140595679-140595846) | |
| 600-804, gnl|bosTau2|chr2 (83636666-83636870) | |
| 600-804, gnl|canFam2|chr2 (84369516-84369281) | |
| 600-804, gnl|danRer3|chr6 (23368930-23368749) | |
| 600-804, gnl|dasNov1|scaffold_35092 (15703-15938) | |
| 600-804, gnl|echTel1|scaffold_237499 (2518-2282) | |
| 600-804, gnl|fr1|chrUn (102526203-102526400) | |
| 600-804, gnl|hg17|chr1 (16303884-16304119) | |
| 600-804, gnl|Hg17|chr1 (16304107-16303903) | |
| 600-804, gnl|loxAfr1|scaffold_126982 (4355-4123) | |
| 600-804, gnl|mm7|chr4 (140598494-140598259) | |
| 600-804, gnl|Mm7|chr4 (140598269-140598473) | |
| 600-804, gnl|monDom2|scaffold_109 (2780431-2780193) | |
| 600-804, gnl|oryCun1|scaffold_183886 (4047-3812) | |
| 600-804, gnl|panTro1|chr1 (16468726-16468961) | |
| 600-804, gnl|rheMac2|chr1 (19036677-19036912) | |
| 600-804, gnl|rn3|chr5 (160086633-160086398) | |
| 600-804, gnl|tetNig1|chr11 (4597792-4597596) | |
| 600-804, gnl|xenTro1|scaffold_2297 (18536-18763) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |