Ss1.1-Mixn-0035l03.5
|
CCCCAGCAGGGAGGGACAGGCAAGGAACAGACTGTTGGGCTCTTCCTGCTGCTGAAAATT
CACTGGGCACTGGAGGAGGAAATCTACCTTCACTCTTCTGCCCTGAATGTTTTCCCAAAC
ATGAAGGCAATGAGTTTAGTCTTCTTGGTGGGACTTATAGGAGAGTTCCAAGTTTTTTCA
AGTGCCTCCTCTCCTGTCAATTGTCAGTGGGATTCCTATGCTCCTTGGTCAGAATGCAAT
GGTTGTACCAAGACTCAGACTCGCAGGAGACCCATTGCTGTTTATGGGCAGTATGGCGGG
CATCCCTGTGTCGGAAGTACGTTTGAAACACAATCATGTGAACCTACACGAGGATGTCCA
ACAGAAGAAGGATGTGGAGAGCGTTTCAGATGTTTTTCAGGTCAGTGCATCAGCAAATCT
TTGGTTTGCAACGGGGATTCTGACTGTGAAGAAGACAGTGCTGATGAAGACCGGTGTGAG
GACTCAGAAAGCAGACCTTCCTGTGACCTCAGTAAACCTCCTCCCAACATAGAACTTACT
GGAAATGGTTACAATGCACTCACGGGCCAGTTTAGGAACAGAGTCCTCAACACTAAAAGT
TTTGGTGGTCAATGCAGAAAGGTGTTTAGTGGGGATGGGAGAGATTTCTACAGACTGAGT
GGAAATGTCCTCTCCTACACATTCCAGGTGAAAGTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCCAGCAGGGAGGGACAGGCAAGGAACAGACTGTTGGGCTCTTCCTGCTGCTGAAAATT
CACTGGGCACTGGAGGAGGAAATCTACCTTCACTCTTCTGCCCTGAATGTTTTCCCAAAC
ATGAAGGCAATGAGTTTAGTCTTCTTGGTGGGACTTATAGGAGAGTTCCAAGTTTTTTCA
AGTGCCTCCTCTCCTGTCAATTGTCAGTGGGATTCCTATGCTCCTTGGTCAGAATGCAAT
GGTTGTACCAAGACTCAGACTCGCAGGAGACCCATTGCTGTTTATGGGCAGTATGGCGGG
CATCCCTGTGTCGGAAGTACGTTTGAAACACAATCATGTGAACCTACACGAGGATGTCCA
ACAGAAGAAGGATGTGGAGAGCGTTTCAGATGTTTTTCAGGTCAGTGCATCAGCAAATCT
TTGGTTTGCAACGGGGATTCTGACTGTGAAGAAGACAGTGCTGATGAAGACCGGTGTGAG
GACTCAGAAAGCAGACCTTCCTGTGACCTCAGTAAACCTCCTCCCAACATAGAACTTACT
GGAAATGGTTACAATGCACTCACGGGCCAGTTTAGGAACAGAGTCCTCAACACTAAAAGT
TTTGGTGGTCAATGCAGAAAGGTGTTTAGTGGGGATGGGAGAGATTTCTACAGACTGAGT
GGAAATGTCCTCTCCTACACATTCCAGGTGAAAGTA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
548-689, gnl|bosTau2|chr20 (20094628-20094769) |
|
548-689, gnl|canFam2|chr4 (71687614-71687494) |
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548-689, gnl|danRer3|chr21 (11414186-11414304) |
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548-689, gnl|dasNov1|scaffold_82838 (4148-4030) |
|
548-689, gnl|echTel1|scaffold_315663 (129494-129376) |
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548-689, gnl|galGal2|chrZ (6045461-6045579) |
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548-689, gnl|hg17|chr5 (40973402-40973520) |
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548-689, gnl|Hg17|chr5 (40973410-40973551) |
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548-689, gnl|mm7|chr15 (4870668-4870550) |
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548-689, gnl|Mm7|chr15 (4870658-4870517) |
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548-689, gnl|monDom2|scaffold_20 (30094349-30094231) |
|
548-689, gnl|oryCun1|scaffold_212908 (31894-31775) |
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548-689, gnl|panTro1|chr4 (75576591-75576473) |
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548-689, gnl|rheMac2|chr6 (40784123-40784241) |
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548-689, gnl|rn3|chr2 (54162451-54162333) |
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548-689, gnl|tetNig1|chr12 (8708864-8708775) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
548-689, gnl|bosTau2|chr20 (20094628-20094769) |
|
548-689, gnl|canFam2|chr4 (71687614-71687494) |
|
548-689, gnl|danRer3|chr21 (11414186-11414304) |
|
548-689, gnl|dasNov1|scaffold_82838 (4148-4030) |
|
548-689, gnl|echTel1|scaffold_315663 (129494-129376) |
|
548-689, gnl|galGal2|chrZ (6045461-6045579) |
|
548-689, gnl|hg17|chr5 (40973402-40973520) |
|
548-689, gnl|Hg17|chr5 (40973410-40973551) |
|
548-689, gnl|mm7|chr15 (4870668-4870550) |
|
548-689, gnl|Mm7|chr15 (4870658-4870517) |
|
548-689, gnl|monDom2|scaffold_20 (30094349-30094231) |
|
548-689, gnl|oryCun1|scaffold_212908 (31894-31775) |
|
548-689, gnl|panTro1|chr4 (75576591-75576473) |
|
548-689, gnl|rheMac2|chr6 (40784123-40784241) |
|
548-689, gnl|rn3|chr2 (54162451-54162333) |
|
548-689, gnl|tetNig1|chr12 (8708864-8708775) |
|
cty (0.20816) |
|
nlu (0.191681) |
|
che (0.136314) |
|
cty (0.20816) |
|
nlu (0.191681) |
|
che (0.136314) |
