Ss1.1-Mixn-0035n07.5
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TATGTAGCGAGCTTTGGTCCTAAGAAGCGTCCAAGTCCTGCACTCATTAGTCAGATGAAC
ACTTTTCAGTGCTGATGGGTTTAGTGTCATGTGAGAAGTAAGATACACATGAAACAAAAA
ATTAGAAACAGTAACTAGAAACTCATTATAGAGATATTCATAACCAATTATAGGTTGGTA
CAATGCCAGAATTACTGGAAGCAGATGAGCAGTGGTCTGCAAAAGCTCTATGGTGGGGAC
GCACTTTCAGAGCCAGCTCTGTGTTGTAGGTGCCAAGGAGATCAGGACTGGTGTGGAAAT
GGTCCCCCTTCATGCTTGTACTTGAGGCCTGAATCCCACTTACTCCACTGCAGGCTGAAA
CCTTTCATAGACTGAGGGAAAAAAACCAAATGGTCAGGCACCAAGTTTAGTTCCTCTGCC
AGTGGTGGTTTTCCTAAAAAGAAGTTCAGTGGAGGGACTGGCTGCAGGTACAAGGAGGTC
AGTGGTAGGTGGTTTGTAATGAAAGGACTGTAATCTCCCACACCATGGAGACTGATGGCG
TCTTCATTGTGAGGCATCACAATTAAAAGCAACAGATGAGAGAGAGCAAAATGTTAGATC
TTGTGACAAGCTTTTTCTTTCTTTTCCTTTTTATAAAAAGTGTATTTGGTTCCTAAGTTA
TCTGGTCTTTTTTCAGGTTACCTAAGAAGAGGGGTTGCCAGCTGGGTCCATTTCAATTGG
GAAACTCTTGTGTCCTTTCCATTTTGAGTATTTTGGGAAAATGGATATGATTCTTAAAAA
GATGTGTGTTTTACTTCCTACATGAGCTCAGACTCTCCGGTGGCCCTGGGCCTTTTCTGG
GCTCCGTCGTCTCCTGCAGGGTGAATTACAGAATGCTGTGCATGTCTGTCTGCACCAATA
CCATGTGTATGTGGTAGGAGTTGTAACCAGTTTCTGGATCTGTATGGTACTATGAGACAC
TTATTTTATAATTCTGTAACTGTATGGCAGTGTTATGCCAAAAAATGTACAAAGAGCAAT
AGTTTCTGTTGTTTACTGCTGTATTTAAAAATATTGTTTCTGAAATAATATATGTAGAGT
TCCTTTAAAGTAATTATTTTTAATAACTATTGCCAAATACACATCCTGTAAAGTGAATAA
AAGCCACTTCACCTTAGTTAACATTCTAGCATTATGTTAGAGTCCATAATGTTGATTTTG
CATGATTAAAATATTTTTAAAGAG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TATGTAGCGAGCTTTGGTCCTAAGAAGCGTCCAAGTCCTGCACTCATTAGTCAGATGAAC
ACTTTTCAGTGCTGATGGGTTTAGTGTCATGTGAGAAGTAAGATACACATGAAACAAAAA
ATTAGAAACAGTAACTAGAAACTCATTATAGAGATATTCATAACCAATTATAGGTTGGTA
CAATGCCAGAATTACTGGAAGCAGATGAGCAGTGGTCTGCAAAAGCTCTATGGTGGGGAC
GCACTTTCAGAGCCAGCTCTGTGTTGTAGGTGCCAAGGAGATCAGGACTGGTGTGGAAAT
GGTCCCCCTTCATGCTTGTACTTGAGGCCTGAATCCCACTTACTCCACTGCAGGCTGAAA
CCTTTCATAGACTGAGGGAAAAAAACCAAATGGTCAGGCACCAAGTTTAGTTCCTCTGCC
AGTGGTGGTTTTCCTAAAAAGAAGTTCAGTGGAGGGACTGGCTGCAGGTACAAGGAGGTC
AGTGGTAGGTGGTTTGTAATGAAAGGACTGTAATCTCCCACACCATGGAGACTGATGGCG
TCTTCATTGTGAGGCATCACAATTAAAAGCAACAGATGAGAGAGAGCAAAATGTTAGATC
TTGTGACAAGCTTTTTCTTTCTTTTCCTTTTTATAAAAAGTGTATTTGGTTCCTAAGTTA
TCTGGTCTTTTTTCAGGTTACCTAAGAAGAGGGGTTGCCAGCTGGGTCCATTTCAATTGG
GAAACTCTTGTGTCCTTTCCATTTTGAGTATTTTGGGAAAATGGATATGATTCTTAAAAA
GATGTGTGTTTTACTTCCTACATGAGCTCAGACTCTCCGGTGGCCCTGGGCCTTTTCTGG
GCTCCGTCGTCTCCTGCAGGGTGAATTACAGAATGCTGTGCATGTCTGTCTGCACCAATA
CCATGTGTATGTGGTAGGAGTTGTAACCAGTTTCTGGATCTGTATGGTACTATGAGACAC
TTATTTTATAATTCTGTAACTGTATGGCAGTGTTATGCCAAAAAATGTACAAAGAGCAAT
AGTTTCTGTTGTTTACTGCTGTATTTAAAAATATTGTTTCTGAAATAATATATGTAGAGT
TCCTTTAAAGTAATTATTTTTAATAACTATTGCCAAATACACATCCTGTAAAGTGAATAA
AAGCCACTTCACCTTAGTTAACATTCTAGCATTATGTTAGAGTCCATAATGTTGATTTTG
CATGATTAAAATATTTTTAAAGAG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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3-478, gnl|bosTau2|chr9 (1583390-1582933) |
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3-478, gnl|canFam2|chr12 (36695478-36696049) |
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3-478, gnl|dasNov1|scaffold_30046 (12707-13199) |
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3-478, gnl|echTel1|scaffold_295987 (72655-73217) |
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3-478, gnl|hg17|chr6 (72074094-72074659) |
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3-478, gnl|Hg17|chr6 (72074147-72074630) |
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3-478, gnl|loxAfr1|scaffold_90957 (4856-4235) |
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3-478, gnl|mm7|chr1 (23572562-23572156) |
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3-478, gnl|oryCun1|scaffold_207619 (4540-3999) |
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3-478, gnl|panTro1|chr5 (73207027-73207592) |
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3-478, gnl|rheMac2|chr4 (67606219-67606781) |
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3-478, gnl|rn3|chr9 (22229456-22229049) |
| |
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550-1224, gnl|bosTau2|chr9 (1582889-1582218) |
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550-1224, gnl|Hg17|chr6 (72074701-72075364) |
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550-1224, gnl|Mm7|chr1 (23571783-23571206) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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3-478, gnl|bosTau2|chr9 (1583390-1582933) |
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3-478, gnl|canFam2|chr12 (36695478-36696049) |
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3-478, gnl|dasNov1|scaffold_30046 (12707-13199) |
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3-478, gnl|echTel1|scaffold_295987 (72655-73217) |
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3-478, gnl|hg17|chr6 (72074094-72074659) |
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3-478, gnl|Hg17|chr6 (72074147-72074630) |
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3-478, gnl|loxAfr1|scaffold_90957 (4856-4235) |
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3-478, gnl|mm7|chr1 (23572562-23572156) |
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3-478, gnl|oryCun1|scaffold_207619 (4540-3999) |
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3-478, gnl|panTro1|chr5 (73207027-73207592) |
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3-478, gnl|rheMac2|chr4 (67606219-67606781) |
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3-478, gnl|rn3|chr9 (22229456-22229049) |
| |
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550-1224, gnl|bosTau2|chr9 (1582889-1582218) |
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550-1224, gnl|Hg17|chr6 (72074701-72075364) |
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550-1224, gnl|Mm7|chr1 (23571783-23571206) |
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fce (0.271592) |
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cty (0.20816) |
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sto (0.179824) |
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gul (0.177588) |
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fat (0.147427) |
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ski (0.146735) |
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clu (0.119646) |
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eje (0.0988338) |
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fce (0.271592) |
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cty (0.20816) |
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sto (0.179824) |
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gul (0.177588) |
|
fat (0.147427) |
|
ski (0.146735) |
|
clu (0.119646) |
|
eje (0.0988338) |
