Ss1.1-Mixn-0036g12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTATCTGCTGGGACGTGCCTGAACACGCTGACCGGGCACACAGAGTGGGTCACCAAGGT GGTTTTGCAGAAGTGCAAAGTCAAGTCTCTCTTGCACAGCCCTGGAGACTATATCCTTTT AAGTGCAGACAAATATGAGATCAAGATTTGGCCAATTGGGAGAGAAATTAACTGTAAGTG CTTAAAGACGTTGTCTGTCTCTGAGGATAGAAGTATCTGCCTGCAGCCAAGACTTCATTT TGATGGCAAATACATTGTCTGTAGTTCAGCACTGGGTCTCTACCAGTGGGACTTTGCCAG TTATGATATTCTCAGGGTCATCAAGACTCCTGAGATAGCAAACTTGGCCTTGCTTGGCTT TGGAGATATCTTTGCCCTGCTGTTTGACAACCGCTACCTGTATATCATGGACTTGCGGAC AGAGAGCCTGATTAGCCGCTGGCCTCTGCCAGAGTATAGGAAATCCAAGAGAGGCTCCAG TTTCCTGGCGGGCGAAGCGTCCTGGCTCAATGGACTGGATGGGCACAATGACACGGGCTT GGTCTTTGCCACCAGCATGCCTGACCACAGTATTCACCTGGTGTTGTGGAAGGAGCACAG CTGAGGCCACGAGCCGCACCGCTGACTGACTTTGGGCCCAGGGCTGCGGGTTTTGAGTGC AACCTCTGTGGCAGCCGACTGCATGAACCAAAGTTCTCACCTAATGGTATCATCACGCAG TGCACAATCATTTATCTCTGTTTGCCAGGGGGCCAGGGCTCGGGTTGGGGAGGGCTTGTT TTATGGACATATACTGCAGCATGCTGATGGGGTGCACCATTGACTTCATTTGTACTTAGT TATGTTGGTCAGGATAAGAGGGTGCATTTGGGGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTATCTGCTGGGACGTGCCTGAACACGCTGACCGGGCACACAGAGTGGGTCACCAAGGT GGTTTTGCAGAAGTGCAAAGTCAAGTCTCTCTTGCACAGCCCTGGAGACTATATCCTTTT AAGTGCAGACAAATATGAGATCAAGATTTGGCCAATTGGGAGAGAAATTAACTGTAAGTG CTTAAAGACGTTGTCTGTCTCTGAGGATAGAAGTATCTGCCTGCAGCCAAGACTTCATTT TGATGGCAAATACATTGTCTGTAGTTCAGCACTGGGTCTCTACCAGTGGGACTTTGCCAG TTATGATATTCTCAGGGTCATCAAGACTCCTGAGATAGCAAACTTGGCCTTGCTTGGCTT TGGAGATATCTTTGCCCTGCTGTTTGACAACCGCTACCTGTATATCATGGACTTGCGGAC AGAGAGCCTGATTAGCCGCTGGCCTCTGCCAGAGTATAGGAAATCCAAGAGAGGCTCCAG TTTCCTGGCGGGCGAAGCGTCCTGGCTCAATGGACTGGATGGGCACAATGACACGGGCTT GGTCTTTGCCACCAGCATGCCTGACCACAGTATTCACCTGGTGTTGTGGAAGGAGCACAG CTGAGGCCACGAGCCGCACCGCTGACTGACTTTGGGCCCAGGGCTGCGGGTTTTGAGTGC AACCTCTGTGGCAGCCGACTGCATGAACCAAAGTTCTCACCTAATGGTATCATCACGCAG TGCACAATCATTTATCTCTGTTTGCCAGGGGGCCAGGGCTCGGGTTGGGGAGGGCTTGTT TTATGGACATATACTGCAGCATGCTGATGGGGTGCACCATTGACTTCATTTGTACTTAGT TATGTTGGTCAGGATAAGAGGGTGCATTTGGGGCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 313-510, gnl|bosTau2|chr8 (61529844-61530041) | |
| 313-510, gnl|canFam2|chr11 (76854197-76854403) | |
| 313-510, gnl|canFam2|chr11 (76854197-76854390) | |
| 313-510, gnl|danRer3|chr5 (27557333-27557126) | |
| 313-510, gnl|danRer3|chr5 (27557333-27557137) | |
| 313-510, gnl|dasNov1|scaffold_8366 (106661-106454) | |
| 313-510, gnl|dasNov1|scaffold_8366 (106661-106467) | |
| 313-510, gnl|echTel1|scaffold_314059 (40178-40384) | |
| 313-510, gnl|echTel1|scaffold_314059 (40178-40371) | |
| 313-510, gnl|fr1|chrUn (219577026-219577232) | |
| 313-510, gnl|fr1|chrUn (219577026-219577219) | |
| 313-510, gnl|galGal2|chr17 (74620-74415) | |
| 313-510, gnl|galGal2|chr17 (74620-74427) | |
| 313-510, gnl|hg17|chr5 (178357658-178357851) | |
| 313-510, gnl|hg17|chr9 (120606486-120606692) | |
| 313-510, gnl|Hg17|chr9 (120606682-120606485) | |
| 313-510, gnl|loxAfr1|scaffold_14439 (28785-28982) | |
| 313-510, gnl|loxAfr1|scaffold_14439 (28785-28978) | |
| 313-510, gnl|mm7|chr2 (34813117-34813323) | |
| 313-510, gnl|mm7|chr2 (34813117-34813310) | |
| 313-510, gnl|Mm7|chr2 (34813313-34813116) | |
| 313-510, gnl|monDom2|scaffold_38 (12998485-12998691) | |
| 313-510, gnl|monDom2|scaffold_38 (12998485-12998678) | |
| 313-510, gnl|oryCun1|scaffold_201334 (115543-115750) | |
| 313-510, gnl|oryCun1|scaffold_201334 (115543-115737) | |
| 313-510, gnl|panTro1|chr11 (105342951-105343157) | |
| 313-510, gnl|panTro1|chr4 (185866664-185866857) | |
| 313-510, gnl|rheMac2|chr15 (15247526-15247320) | |
| 313-510, gnl|rheMac2|chr6 (175618683-175618876) | |
| 313-510, gnl|rn3|chr3 (13713842-13714048) | |
| 313-510, gnl|rn3|chr3 (13713842-13714035) | |
| 313-510, gnl|tetNig1|chrUn_random (90109487-90109287) | |
| 313-510, gnl|tetNig1|chrUn_random (90109487-90109294) | |
| 313-510, gnl|xenTro1|scaffold_95 (2333644-2333850) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 313-510, gnl|bosTau2|chr8 (61529844-61530041) | |
| 313-510, gnl|canFam2|chr11 (76854197-76854403) | |
| 313-510, gnl|canFam2|chr11 (76854197-76854390) | |
| 313-510, gnl|danRer3|chr5 (27557333-27557126) | |
| 313-510, gnl|danRer3|chr5 (27557333-27557137) | |
| 313-510, gnl|dasNov1|scaffold_8366 (106661-106454) | |
| 313-510, gnl|dasNov1|scaffold_8366 (106661-106467) | |
| 313-510, gnl|echTel1|scaffold_314059 (40178-40384) | |
| 313-510, gnl|echTel1|scaffold_314059 (40178-40371) | |
| 313-510, gnl|fr1|chrUn (219577026-219577232) | |
| 313-510, gnl|fr1|chrUn (219577026-219577219) | |
| 313-510, gnl|galGal2|chr17 (74620-74415) | |
| 313-510, gnl|galGal2|chr17 (74620-74427) | |
| 313-510, gnl|hg17|chr5 (178357658-178357851) | |
| 313-510, gnl|hg17|chr9 (120606486-120606692) | |
| 313-510, gnl|Hg17|chr9 (120606682-120606485) | |
| 313-510, gnl|loxAfr1|scaffold_14439 (28785-28982) | |
| 313-510, gnl|loxAfr1|scaffold_14439 (28785-28978) | |
| 313-510, gnl|mm7|chr2 (34813117-34813323) | |
| 313-510, gnl|mm7|chr2 (34813117-34813310) | |
| 313-510, gnl|Mm7|chr2 (34813313-34813116) | |
| 313-510, gnl|monDom2|scaffold_38 (12998485-12998691) | |
| 313-510, gnl|monDom2|scaffold_38 (12998485-12998678) | |
| 313-510, gnl|oryCun1|scaffold_201334 (115543-115750) | |
| 313-510, gnl|oryCun1|scaffold_201334 (115543-115737) | |
| 313-510, gnl|panTro1|chr11 (105342951-105343157) | |
| 313-510, gnl|panTro1|chr4 (185866664-185866857) | |
| 313-510, gnl|rheMac2|chr15 (15247526-15247320) | |
| 313-510, gnl|rheMac2|chr6 (175618683-175618876) | |
| 313-510, gnl|rn3|chr3 (13713842-13714048) | |
| 313-510, gnl|rn3|chr3 (13713842-13714035) | |
| 313-510, gnl|tetNig1|chrUn_random (90109487-90109287) | |
| 313-510, gnl|tetNig1|chrUn_random (90109487-90109294) | |
| 313-510, gnl|xenTro1|scaffold_95 (2333644-2333850) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cut (0.339847) | |
| aor (0.195274) | |
| lun (0.150489) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cut (0.339847) | |
| aor (0.195274) | |
| lun (0.150489) | |
| spc (0.113366) |