Ss1.1-Mixn-0037f14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCGCTCGGCTCCTGACGGAAGCGACCTGGCTCTCTGCTTGGTGGTGCAGAAGAAGTTG GGTCCCTAGATTCCCCCCCCCCACAACTCTCCATTGATGCGTTGAGCTTCCGAGGGAATC ATACCTTCCCGTAAAGCATGTTGCCTTCTCAAGGAGTCCTCCTGCATCCCTATGGCGTGC CTATGATTGTTCCAGCAGCCCCCTACTTCCCCGGACTGATCCAGGGTAATCAGGAAGCTG CCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCTCAGTTTGCCCCCCCTCAGA ACGGCATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACGGGCC AGACCACGGTCCCCGAGCACACGTTAAACCTGTATCCTCCAGCCCAGTCGCACTCGGAGC AGAGTGCCGCGGACACGAGCGCGCACACCGTCTCGGGCACCGCCACACAGACAGATGACG CGGCGCCCACGGATGGCCAGCCCCAGACACAACCTTCCGAAAACACGGAAAACAAGTCCC AGCCCAAGAGGCTGCATGTCTCCAACATCCCCTTCCGGTTCCGGGATCCCGACCTCCGAC AAATGTTTGGCCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCT CAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGA AATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG TAATGACAAATAAAAAGACGGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTG TGGGTGCAGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCGCTCGGCTCCTGACGGAAGCGACCTGGCTCTCTGCTTGGTGGTGCAGAAGAAGTTG GGTCCCTAGATTCCCCCCCCCCACAACTCTCCATTGATGCGTTGAGCTTCCGAGGGAATC ATACCTTCCCGTAAAGCATGTTGCCTTCTCAAGGAGTCCTCCTGCATCCCTATGGCGTGC CTATGATTGTTCCAGCAGCCCCCTACTTCCCCGGACTGATCCAGGGTAATCAGGAAGCTG CCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCTCAGTTTGCCCCCCCTCAGA ACGGCATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACGGGCC AGACCACGGTCCCCGAGCACACGTTAAACCTGTATCCTCCAGCCCAGTCGCACTCGGAGC AGAGTGCCGCGGACACGAGCGCGCACACCGTCTCGGGCACCGCCACACAGACAGATGACG CGGCGCCCACGGATGGCCAGCCCCAGACACAACCTTCCGAAAACACGGAAAACAAGTCCC AGCCCAAGAGGCTGCATGTCTCCAACATCCCCTTCCGGTTCCGGGATCCCGACCTCCGAC AAATGTTTGGCCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCT CAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGA AATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG TAATGACAAATAAAAAGACGGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTG TGGGTGCAGTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 222-457, gnl|bosTau2|chr19 (46343398-46343157) | |
| 222-457, gnl|canFam2|chr6 (37436096-37436321) | |
| 222-457, gnl|danRer3|chr12 (30749423-30749200) | |
| 222-457, gnl|dasNov1|scaffold_117 (135791-136012) | |
| 222-457, gnl|echTel1|scaffold_111434 (519-733) | |
| 222-457, gnl|fr1|chrUn (194792570-194792342) | |
| 222-457, gnl|hg17|chr17 (74623160-74623391) | |
| 222-457, gnl|Hg17|chr17 (74623428-74623187) | |
| 222-457, gnl|loxAfr1|scaffold_72904 (1597-1368) | |
| 222-457, gnl|mm7|chr11 (118622184-118622415) | |
| 222-457, gnl|Mm7|chr11 (118622452-118622211) | |
| 222-457, gnl|monDom2|scaffold_18 (8679856-8680084) | |
| 222-457, gnl|oryCun1|scaffold_76274 (920-711) | |
| 222-457, gnl|panTro1|chr19 (78187439-78187670) | |
| 222-457, gnl|rheMac2|chr16 (74370506-74370737) | |
| 222-457, gnl|rn3|chr10 (108531279-108531510) | |
| 222-457, gnl|tetNig1|chr3 (14257809-14258037) | |
| 222-457, gnl|xenTro1|scaffold_92 (1165472-1165693) | |
| 463-610, gnl|bosTau2|chr19 (46336769-46336627) | |
| 463-610, gnl|canFam2|chr9 (5355254-5355077) | |
| 463-610, gnl|danRer3|chr12 (30767380-30767223) | |
| 463-610, gnl|dasNov1|scaffold_132866 (1986-1809) | |
| 463-610, gnl|echTel1|scaffold_309948 (80871-80717) | |
| 463-610, gnl|fr1|chrUn (194798820-194798641) | |
| 463-610, gnl|hg17|chr17 (74614299-74614477) | |
| 463-610, gnl|Hg17|chr17 (74614471-74614329) | |
| 463-610, gnl|loxAfr1|scaffold_72904 (7788-7625) | |
| 463-610, gnl|mm7|chr11 (118614649-118614817) | |
| 463-610, gnl|Mm7|chr11 (118614811-118614669) | |
| 463-610, gnl|monDom2|scaffold_18 (8662614-8662792) | |
| 463-610, gnl|oryCun1|scaffold_192352 (7801-7979) | |
| 463-610, gnl|panTro1|chr19 (78178480-78178658) | |
| 463-610, gnl|rheMac2|chr16 (74361685-74361863) | |
| 463-610, gnl|rn3|chr10 (108523913-108524081) | |
| 463-610, gnl|tetNig1|chr3 (14251326-14251490) | |
| 463-610, gnl|xenTro1|scaffold_92 (1160309-1160468) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 222-457, gnl|bosTau2|chr19 (46343398-46343157) | |
| 222-457, gnl|canFam2|chr6 (37436096-37436321) | |
| 222-457, gnl|danRer3|chr12 (30749423-30749200) | |
| 222-457, gnl|dasNov1|scaffold_117 (135791-136012) | |
| 222-457, gnl|echTel1|scaffold_111434 (519-733) | |
| 222-457, gnl|fr1|chrUn (194792570-194792342) | |
| 222-457, gnl|hg17|chr17 (74623160-74623391) | |
| 222-457, gnl|Hg17|chr17 (74623428-74623187) | |
| 222-457, gnl|loxAfr1|scaffold_72904 (1597-1368) | |
| 222-457, gnl|mm7|chr11 (118622184-118622415) | |
| 222-457, gnl|Mm7|chr11 (118622452-118622211) | |
| 222-457, gnl|monDom2|scaffold_18 (8679856-8680084) | |
| 222-457, gnl|oryCun1|scaffold_76274 (920-711) | |
| 222-457, gnl|panTro1|chr19 (78187439-78187670) | |
| 222-457, gnl|rheMac2|chr16 (74370506-74370737) | |
| 222-457, gnl|rn3|chr10 (108531279-108531510) | |
| 222-457, gnl|tetNig1|chr3 (14257809-14258037) | |
| 222-457, gnl|xenTro1|scaffold_92 (1165472-1165693) | |
| 463-610, gnl|bosTau2|chr19 (46336769-46336627) | |
| 463-610, gnl|canFam2|chr9 (5355254-5355077) | |
| 463-610, gnl|danRer3|chr12 (30767380-30767223) | |
| 463-610, gnl|dasNov1|scaffold_132866 (1986-1809) | |
| 463-610, gnl|echTel1|scaffold_309948 (80871-80717) | |
| 463-610, gnl|fr1|chrUn (194798820-194798641) | |
| 463-610, gnl|hg17|chr17 (74614299-74614477) | |
| 463-610, gnl|Hg17|chr17 (74614471-74614329) | |
| 463-610, gnl|loxAfr1|scaffold_72904 (7788-7625) | |
| 463-610, gnl|mm7|chr11 (118614649-118614817) | |
| 463-610, gnl|Mm7|chr11 (118614811-118614669) | |
| 463-610, gnl|monDom2|scaffold_18 (8662614-8662792) | |
| 463-610, gnl|oryCun1|scaffold_192352 (7801-7979) | |
| 463-610, gnl|panTro1|chr19 (78178480-78178658) | |
| 463-610, gnl|rheMac2|chr16 (74361685-74361863) | |
| 463-610, gnl|rn3|chr10 (108523913-108524081) | |
| 463-610, gnl|tetNig1|chr3 (14251326-14251490) | |
| 463-610, gnl|xenTro1|scaffold_92 (1160309-1160468) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| mas (0.210305) | |
| hyp (0.142837) | |
| ste (0.135208) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| hyp (0.142837) | |
| ste (0.135208) | |
| ecc (0.115035) |