Non-Coding RNA Search

Ss1.1-Mixn-0037i20.5

Sequence:


               
               TGTTTGAGGAGCCCGCGTGGGCCGAGGAGGCCCCGGCCGTCCCGGACCCCCGGCCGGTGC
CCTTACGGCCGCGGCCCCCGGCAGCCTCGCACACCAAGGGATCCAAGCGCCGCCGGCTCT
TGGCGACATTAAGGGTCCTGGAGGCAGCAGCTCTGCCCCGGCAGCCCCCCAGCCTGCCCG
GTAGTGACTCTGAGGAGGAGGAAGTGGTGGAGAGGAAGAGGAAACACCCGAAAAAGGCCT
TATGTGCCAGTGCTTCTCCCGAAGGAGAGAAGAAAAGAAAGAAGAAATGTCAAAATCGGG
GCCCGCCTGGCAGTGACTCTGAGGTAGAGGAAGCGGCAAGGAACAGGTGCCACGAAGGGG
CTCTTCGTGGCAGAGACTCTGCTAACAAAGAGACAGGAAAGAGGAAACACCAGAAACGGG
CCCCTTCAGATCCTGCCCAGCACCTGGGCAGTGTTGCCCAAACAGGTCCTAAAGCTTGGA
ATTCTAGTGCTGCAAATGACCCCACCAAGCCAAGCCCTGAGACCCCTTCCTCTGAACCCC
CCCGCACCTTGAGTCGCAAGCAGTGGCGGAACCGGCAGAAGAATAAGCGAAGACAGAAGA
ACAAGTTTCGCCCCCCTCAGCCCCCGGGCCAGCCTCCGGAGCCGGCCCCTGCCCCCACCC
AGGAGACAGAGGTGCCTCCTGCCGCCGGGCCAGATGGCCCCGGGGCCCGGGCCGAGGCCC
TAAGGGCCCGCATGGCCCAGCGGCTGGACGGCGCCCGCTTCCGCTACCTCAACGAACAGC
TGTACTCGCAGCCCAGCCATGCCGCGCAGCGCCTCTTCCAGGAAGACCCCGAGGCCTTCC
TCCTGTACCACCGTGGGTTCCAGAGCCAGGTCAGGAAGTGGCCGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTGAGGAGCCCGCGTGGGCCGAGGAGGCCCCGGCCGTCCCGGACCCCCGGCCGGTGC
CCTTACGGCCGCGGCCCCCGGCAGCCTCGCACACCAAGGGATCCAAGCGCCGCCGGCTCT
TGGCGACATTAAGGGTCCTGGAGGCAGCAGCTCTGCCCCGGCAGCCCCCCAGCCTGCCCG
GTAGTGACTCTGAGGAGGAGGAAGTGGTGGAGAGGAAGAGGAAACACCCGAAAAAGGCCT
TATGTGCCAGTGCTTCTCCCGAAGGAGAGAAGAAAAGAAAGAAGAAATGTCAAAATCGGG
GCCCGCCTGGCAGTGACTCTGAGGTAGAGGAAGCGGCAAGGAACAGGTGCCACGAAGGGG
CTCTTCGTGGCAGAGACTCTGCTAACAAAGAGACAGGAAAGAGGAAACACCAGAAACGGG
CCCCTTCAGATCCTGCCCAGCACCTGGGCAGTGTTGCCCAAACAGGTCCTAAAGCTTGGA
ATTCTAGTGCTGCAAATGACCCCACCAAGCCAAGCCCTGAGACCCCTTCCTCTGAACCCC
CCCGCACCTTGAGTCGCAAGCAGTGGCGGAACCGGCAGAAGAATAAGCGAAGACAGAAGA
ACAAGTTTCGCCCCCCTCAGCCCCCGGGCCAGCCTCCGGAGCCGGCCCCTGCCCCCACCC
AGGAGACAGAGGTGCCTCCTGCCGCCGGGCCAGATGGCCCCGGGGCCCGGGCCGAGGCCC
TAAGGGCCCGCATGGCCCAGCGGCTGGACGGCGCCCGCTTCCGCTACCTCAACGAACAGC
TGTACTCGCAGCCCAGCCATGCCGCGCAGCGCCTCTTCCAGGAAGACCCCGAGGCCTTCC
TCCTGTACCACCGTGGGTTCCAGAGCCAGGTCAGGAAGTGGCCGCTGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               HUCE1_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               HUCE1_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               463-888, gnl|bosTau2|chr15 (32770164-32769739)
               

               
               463-888, gnl|Hg17|chr11 (6579411-6578992)
               

               
               463-888, gnl|Mm7|chr7 (101790877-101790458)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               463-888, gnl|bosTau2|chr15 (32770164-32769739)
               

               
               463-888, gnl|Hg17|chr11 (6579411-6578992)
               

               
               463-888, gnl|Mm7|chr7 (101790877-101790458)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	463-888, gnl\|bosTau2\|chr15 (32770164-32769739)
	463-888, gnl\|Hg17\|chr11 (6579411-6578992)
	463-888, gnl\|Mm7\|chr7 (101790877-101790458)