Ss1.1-Mixn-0037k20.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGTTCAGTGCCTTCTCTCCTCCCCTGGCTCTGAACATCCTTCAGAACAGAAACATCGGG AAACCCACGCAGCCAGCCCTGTGCCGGGAGGAGCTGGAAGCGCTCTTCCTCCCCTATGAC CTGAAGCGGCTGGAGATGTACTCACAGAACATGGTGGACTATCACCTCATCATGGACCTG ATCCCGGCCATCTCCCGGCTGTACTTCCTGAACCAGCTGGGGGACCTGGCCCTCTCTGCT GCCCAGTCGGCTCTTCTCTTGGGGATTGGCCTGCAGCACAAGTCTGTGGACCAGCTGGAA AAGGAGATCGAGCTGCCCTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAA GTTGTGAAGCTGTTTAACGAAGTGCAGGAGAAGGCCATCGAGGAGCAGATGGTGGCAGTG AAGGACGTGGTTATGGAGCCCACGATGAAGACGCTGAGTGACGACCTGGATGAAGCAGCA AAGGAATTCCGGGAGAAACACAAGAAAGAAGTGGGGAAGCTGAGGAACATGGACCTCTCT CAGTACATAATCCGTGGGGACGATGAAGAGTGGAATGAGGTTTTGAACAAAGCCGGGCAG AATGCCTCCATCGTCAGCCTAAAAAGTGACAAGAAAAGGAAGTTGGAAGGCAAGCAAGAA CCCAAACAGAACAAGAAGTTGAAGAAAAACAGAGAGATGAAGAACAAAAAGGATGCAAAA CTGAAGCGGAAGAAATAGTGGCGAGAAACTTGGGCATAGGCGGCGGACTTGTTAGGAGAC ACCCTGACTTTCTGAACTCCCTCTGGCTGGACAGGGCGCCCGCCGACTGGACTGTTAAAG GCCGGAGGCCAGCGGCGAGTTCAGCCTGTGGGCCGAGCTTGGCTTAAGGCAGAGTCACCT CCAAGTGGGTCTGCTGAGAACCCGAGGCTTGGCAAGCCCCCACCACCGGCTCTCCTGCCC GAGTCCAGGCCTGCCTTCCCTGCGTTCATCTTTCACTCGGCCCAGCTTTTTTGGTTCCTT CCCACACGTGTGGAAGCCGCATTGGCTCTCGTTCCTTCTCAGGTGCCAAGTACACCGCCT CCTGGGGTGCCCGGGAGGCCGCTGGGGCAGTACTGGGGCCTCTTGTCGAAGACATGACCA AACTCCCTGAGGCGGGAGCTGCAGGCACCCTTGGTCCAGCCAGGCGGCTGTGGCTGTGCG CTGGGGTCCACACGGCCGTGCTGCTGCCTGCTGGCCCAGAAAACCCTGAACTCCTAATAT AGGAAAAGGTATATCATCTGAGTCCCCAAAACCTGTCATTTCATCCATTTGGGACGAAAT GTTGGGAAAGACCTTTTTGCTAGCAGGGGTGAGGGGGGATAGAGAGTCTATTTTTAATAA ATGACATCTTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGTTCAGTGCCTTCTCTCCTCCCCTGGCTCTGAACATCCTTCAGAACAGAAACATCGGG AAACCCACGCAGCCAGCCCTGTGCCGGGAGGAGCTGGAAGCGCTCTTCCTCCCCTATGAC CTGAAGCGGCTGGAGATGTACTCACAGAACATGGTGGACTATCACCTCATCATGGACCTG ATCCCGGCCATCTCCCGGCTGTACTTCCTGAACCAGCTGGGGGACCTGGCCCTCTCTGCT GCCCAGTCGGCTCTTCTCTTGGGGATTGGCCTGCAGCACAAGTCTGTGGACCAGCTGGAA AAGGAGATCGAGCTGCCCTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAA GTTGTGAAGCTGTTTAACGAAGTGCAGGAGAAGGCCATCGAGGAGCAGATGGTGGCAGTG AAGGACGTGGTTATGGAGCCCACGATGAAGACGCTGAGTGACGACCTGGATGAAGCAGCA AAGGAATTCCGGGAGAAACACAAGAAAGAAGTGGGGAAGCTGAGGAACATGGACCTCTCT CAGTACATAATCCGTGGGGACGATGAAGAGTGGAATGAGGTTTTGAACAAAGCCGGGCAG AATGCCTCCATCGTCAGCCTAAAAAGTGACAAGAAAAGGAAGTTGGAAGGCAAGCAAGAA CCCAAACAGAACAAGAAGTTGAAGAAAAACAGAGAGATGAAGAACAAAAAGGATGCAAAA CTGAAGCGGAAGAAATAGTGGCGAGAAACTTGGGCATAGGCGGCGGACTTGTTAGGAGAC ACCCTGACTTTCTGAACTCCCTCTGGCTGGACAGGGCGCCCGCCGACTGGACTGTTAAAG GCCGGAGGCCAGCGGCGAGTTCAGCCTGTGGGCCGAGCTTGGCTTAAGGCAGAGTCACCT CCAAGTGGGTCTGCTGAGAACCCGAGGCTTGGCAAGCCCCCACCACCGGCTCTCCTGCCC GAGTCCAGGCCTGCCTTCCCTGCGTTCATCTTTCACTCGGCCCAGCTTTTTTGGTTCCTT CCCACACGTGTGGAAGCCGCATTGGCTCTCGTTCCTTCTCAGGTGCCAAGTACACCGCCT CCTGGGGTGCCCGGGAGGCCGCTGGGGCAGTACTGGGGCCTCTTGTCGAAGACATGACCA AACTCCCTGAGGCGGGAGCTGCAGGCACCCTTGGTCCAGCCAGGCGGCTGTGGCTGTGCG CTGGGGTCCACACGGCCGTGCTGCTGCCTGCTGGCCCAGAAAACCCTGAACTCCTAATAT AGGAAAAGGTATATCATCTGAGTCCCCAAAACCTGTCATTTCATCCATTTGGGACGAAAT GTTGGGAAAGACCTTTTTGCTAGCAGGGGTGAGGGGGGATAGAGAGTCTATTTTTAATAA ATGACATCTTAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 73-250, gnl|bosTau2|chr15 (39079106-39079283) | |
| 73-250, gnl|Hg17|chr11 (34118519-34118696) | |
| 73-250, gnl|Mm7|chr2 (103577679-103577502) | |
| 362-482, gnl|bosTau2|chr15 (39080222-39080342) | |
| 362-482, gnl|canFam2|chr18 (36678648-36678520) | |
| 362-482, gnl|dasNov1|scaffold_114654 (3165-3308) | |
| 362-482, gnl|echTel1|scaffold_291872 (33559-33672) | |
| 362-482, gnl|fr1|chrUn (37952854-37952986) | |
| 362-482, gnl|galGal2|chrUn (14250712-14250569) | |
| 362-482, gnl|hg17|chr11 (34119829-34119972) | |
| 362-482, gnl|Hg17|chr11 (34119834-34120009) | |
| 362-482, gnl|loxAfr1|scaffold_1652 (139973-140115) | |
| 362-482, gnl|mm7|chr2 (103576563-103576428) | |
| 362-482, gnl|Mm7|chr2 (103576561-103576447) | |
| 362-482, gnl|monDom2|scaffold_10 (80367456-80367598) | |
| 362-482, gnl|oryCun1|scaffold_198377 (93704-93845) | |
| 362-482, gnl|panTro1|chr9 (34505984-34506127) | |
| 362-482, gnl|rheMac2|chr14 (37678902-37678759) | |
| 362-482, gnl|rn3|chr3 (88916467-88916341) | |
| 362-482, gnl|tetNig1|chr13 (10495733-10495849) | |
| 625-1392, gnl|bosTau2|chr15 (39085624-39086422) | |
| 625-1392, gnl|Hg17|chr11 (34124205-34125026) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 73-250, gnl|bosTau2|chr15 (39079106-39079283) | |
| 73-250, gnl|Hg17|chr11 (34118519-34118696) | |
| 73-250, gnl|Mm7|chr2 (103577679-103577502) | |
| 362-482, gnl|bosTau2|chr15 (39080222-39080342) | |
| 362-482, gnl|canFam2|chr18 (36678648-36678520) | |
| 362-482, gnl|dasNov1|scaffold_114654 (3165-3308) | |
| 362-482, gnl|echTel1|scaffold_291872 (33559-33672) | |
| 362-482, gnl|fr1|chrUn (37952854-37952986) | |
| 362-482, gnl|galGal2|chrUn (14250712-14250569) | |
| 362-482, gnl|hg17|chr11 (34119829-34119972) | |
| 362-482, gnl|Hg17|chr11 (34119834-34120009) | |
| 362-482, gnl|loxAfr1|scaffold_1652 (139973-140115) | |
| 362-482, gnl|mm7|chr2 (103576563-103576428) | |
| 362-482, gnl|Mm7|chr2 (103576561-103576447) | |
| 362-482, gnl|monDom2|scaffold_10 (80367456-80367598) | |
| 362-482, gnl|oryCun1|scaffold_198377 (93704-93845) | |
| 362-482, gnl|panTro1|chr9 (34505984-34506127) | |
| 362-482, gnl|rheMac2|chr14 (37678902-37678759) | |
| 362-482, gnl|rn3|chr3 (88916467-88916341) | |
| 362-482, gnl|tetNig1|chr13 (10495733-10495849) | |
| 625-1392, gnl|bosTau2|chr15 (39085624-39086422) | |
| 625-1392, gnl|Hg17|chr11 (34124205-34125026) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| pla (0.133672) | |
| ese (0.126502) |