Non-Coding RNA Search

Ss1.1-Mixn-0037n13.5

Sequence:


               
               CGGAACTGTGGCCTCCTGCCTTGCTTCAGTGACTCACCGGGGTCCCCCTTTCCCCACCGC
CCTCGGAGGACCCCCGCGCACCCCAGGACCCTCTCCTTCACCATGTCGGAGCCCACGCTC
CCACCCGGGGCCCTGGGCCGGCCTCGGAGCTCTGCGGTGGAAGGATGGGAGAGGGCCCCG
ACACATGATTCTCCTACGGCTGGAAGCAGAGGCGCTCTGGACTTGGCACTGCCACCCCCC
GAGGGGCCCTGGCGCTCGGGCTCCGTGGCGCCTGCAGCAGGAGCCAGGAGGACCCGGCAG
ACAGGCCCTCTCCCCCAAGTGTCTGGATCCTGCCTCTCGCCAAAGCAGAGTCGGCCATCC
ACTGCCCACCACCTGCCCCTCGGCTGCATGTCCACCGACCACGCCTGCCTGAGGACAAAG
GCTTGCGCTGCCTGCACCCCCCTCGCCTGGCCCCTCACCTCCTCCCCGGCCCGTCTGCTG
CCTGAGGAAGGAAGGACCCGCTTCCTGTTGTTGGTGCTAACTCCTTTGTGATTCCAGCCC
CCTGTGGCCTGTCCGTGGCCTGTGGAGAAGCCCCCCTGGCGTAAAGCCTGGGGAGGGGAT
GGAGGGCTGGCCGGTCATCCCGCGGGCAGGGCCGCGCAGTCCGGACCTCTGCCCGCAGGG
CCTGACCAGGGAGCACGTTTCCACTGCCACCCTCTGTCCAGTCTGTGACCTGAAGGGAGT
GAAAAGGGCACCAATAGCCACACACACACACACACTCTCTCTCTCACACACACACACACA
CACACACACACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGAACTGTGGCCTCCTGCCTTGCTTCAGTGACTCACCGGGGTCCCCCTTTCCCCACCGC
CCTCGGAGGACCCCCGCGCACCCCAGGACCCTCTCCTTCACCATGTCGGAGCCCACGCTC
CCACCCGGGGCCCTGGGCCGGCCTCGGAGCTCTGCGGTGGAAGGATGGGAGAGGGCCCCG
ACACATGATTCTCCTACGGCTGGAAGCAGAGGCGCTCTGGACTTGGCACTGCCACCCCCC
GAGGGGCCCTGGCGCTCGGGCTCCGTGGCGCCTGCAGCAGGAGCCAGGAGGACCCGGCAG
ACAGGCCCTCTCCCCCAAGTGTCTGGATCCTGCCTCTCGCCAAAGCAGAGTCGGCCATCC
ACTGCCCACCACCTGCCCCTCGGCTGCATGTCCACCGACCACGCCTGCCTGAGGACAAAG
GCTTGCGCTGCCTGCACCCCCCTCGCCTGGCCCCTCACCTCCTCCCCGGCCCGTCTGCTG
CCTGAGGAAGGAAGGACCCGCTTCCTGTTGTTGGTGCTAACTCCTTTGTGATTCCAGCCC
CCTGTGGCCTGTCCGTGGCCTGTGGAGAAGCCCCCCTGGCGTAAAGCCTGGGGAGGGGAT
GGAGGGCTGGCCGGTCATCCCGCGGGCAGGGCCGCGCAGTCCGGACCTCTGCCCGCAGGG
CCTGACCAGGGAGCACGTTTCCACTGCCACCCTCTGTCCAGTCTGTGACCTGAAGGGAGT
GAAAAGGGCACCAATAGCCACACACACACACACACTCTCTCTCTCACACACACACACACA
CACACACACACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-576, gnl|bosTau2|chr19 (17233222-17232607)
               

               
               1-576, gnl|Hg17|chr17 (1425635-1425061)
               

               
               1-576, gnl|Mm7|chr11 (75654067-75654678)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr19 (17233222-17232607)
               

               
               1-576, gnl|Hg17|chr17 (1425635-1425061)
               

               
               1-576, gnl|Mm7|chr11 (75654067-75654678)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-576, gnl\|bosTau2\|chr19 (17233222-17232607)
	1-576, gnl\|Hg17\|chr17 (1425635-1425061)
	1-576, gnl\|Mm7\|chr11 (75654067-75654678)