Ss1.1-Mixn-0037p14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGGGTGCCGAGACTCGGGACGCGGCAGAAGCCGAAGCCTCGCAGCCTCAGAAGCGCTA CTATCGACAGCGGGCTCACTCCAACCCCATGGCAGACCATACACTGTGCTACCCTGTGAA GCCAGAGGACATGGACTGGTCTGAGCTATATCCAGAGTTCTTCACTCCACCGACTCAAAA TCAGAGCCACGATGACCCAAAAGATGAGAAAGAAAAGAGAGCTCAGGCCCAAGTGGAGTT TGCAGACATAGGCTGTGGTTATGGTGGCCTGTTAGTGGCACTGTCACCGCTGTTCCCAGA CACACTGATGCTGGGTCTGGAGATCCGGGTGAAAGTCTCAGACTATGTACAAGATCGGAT TCGGGCCCTACGAGCAGCTCCTGGAGGTGGCTTCCAGAACATCGCCTGTCTCCGTAGCAA TGCCATGAAACATCTTCCTAACTTCTTCCGCAAAGGCCAGCTGACAAAGATGTTCTTCCT CTTCCCTGACCCACATTTCAAGCGGACAAAGCACAAGTGGCGAATCATCAGCCCCACACT GCTGGCAGAATATGCCTATGTGCTGAGTGTTGGGGGGCTGGTATATACCATAACTGACGT GCTGGAGCTACATGACTGGATGTGCACCCATTTTGAAGGGCACCCCCTGTTTGAGCGTGT GCCTTTGGAGGAGCTGAGTGAAGACCCCATTGTGGGACATCTGGGCACCTCAACCGAGGA GGGAAAGAAAGTTCTACGCAATGGAGGGAAGAATTTCCCAGCCATCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGGGTGCCGAGACTCGGGACGCGGCAGAAGCCGAAGCCTCGCAGCCTCAGAAGCGCTA CTATCGACAGCGGGCTCACTCCAACCCCATGGCAGACCATACACTGTGCTACCCTGTGAA GCCAGAGGACATGGACTGGTCTGAGCTATATCCAGAGTTCTTCACTCCACCGACTCAAAA TCAGAGCCACGATGACCCAAAAGATGAGAAAGAAAAGAGAGCTCAGGCCCAAGTGGAGTT TGCAGACATAGGCTGTGGTTATGGTGGCCTGTTAGTGGCACTGTCACCGCTGTTCCCAGA CACACTGATGCTGGGTCTGGAGATCCGGGTGAAAGTCTCAGACTATGTACAAGATCGGAT TCGGGCCCTACGAGCAGCTCCTGGAGGTGGCTTCCAGAACATCGCCTGTCTCCGTAGCAA TGCCATGAAACATCTTCCTAACTTCTTCCGCAAAGGCCAGCTGACAAAGATGTTCTTCCT CTTCCCTGACCCACATTTCAAGCGGACAAAGCACAAGTGGCGAATCATCAGCCCCACACT GCTGGCAGAATATGCCTATGTGCTGAGTGTTGGGGGGCTGGTATATACCATAACTGACGT GCTGGAGCTACATGACTGGATGTGCACCCATTTTGAAGGGCACCCCCTGTTTGAGCGTGT GCCTTTGGAGGAGCTGAGTGAAGACCCCATTGTGGGACATCTGGGCACCTCAACCGAGGA GGGAAAGAAAGTTCTACGCAATGGAGGGAAGAATTTCCCAGCCATCTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 1-111, gnl|bosTau2|chr5 (34348189-34348079) | |
| 1-111, gnl|dasNov1|scaffold_56305 (3714-3788) | |
| 1-111, gnl|echTel1|scaffold_123180 (190-122) | |
| 1-111, gnl|fr1|chrUn (124200078-124200004) | |
| 1-111, gnl|hg17|chr12 (56452020-56452094) | |
| 1-111, gnl|Hg17|chr12 (56452131-56452024) | |
| 1-111, gnl|mm7|chr10 (126539554-126539480) | |
| 1-111, gnl|monDom2|scaffold_283 (157672-157746) | |
| 1-111, gnl|oryCun1|scaffold_178366 (46309-46235) | |
| 1-111, gnl|panTro1|chr10 (57696777-57696851) | |
| 1-111, gnl|rheMac2|chr11 (54861202-54861276) | |
| 1-111, gnl|tetNig1|chr11 (7089697-7089627) | |
| 1-111, gnl|xenTro1|scaffold_34 (1990731-1990660) | |
| 274-463, gnl|bosTau2|chr5 (34346021-34345832) | |
| 274-463, gnl|canFam2|chr10 (4815172-4815351) | |
| 274-463, gnl|danRer3|chr11 (1354652-1354827) | |
| 274-463, gnl|dasNov1|scaffold_913 (150902-150723) | |
| 274-463, gnl|echTel1|scaffold_123180 (535-356) | |
| 274-463, gnl|fr1|chrUn (124200821-124200641) | |
| 274-463, gnl|Hg17|chr12 (56450008-56449819) | |
| 274-463, gnl|hg17|chrX (24972532-24972708) | |
| 274-463, gnl|loxAfr1|scaffold_119799 (5519-5698) | |
| 274-463, gnl|mm7|chr10 (126542125-126541946) | |
| 274-463, gnl|Mm7|chr10 (126541943-126542132) | |
| 274-463, gnl|monDom2|scaffold_283 (154844-155023) | |
| 274-463, gnl|oryCun1|scaffold_178366 (48220-48041) | |
| 274-463, gnl|panTro1|chrX (25796553-25796729) | |
| 274-463, gnl|rheMac2|chrX (23035522-23035698) | |
| 274-463, gnl|tetNig1|chr11 (7090376-7090196) | |
| 274-463, gnl|xenTro1|scaffold_34 (1994404-1994225) | |
| 574-676, gnl|bosTau2|chr5 (34345471-34345369) | |
| 574-676, gnl|canFam2|chr10 (4814719-4814838) | |
| 574-676, gnl|canFam2|chr10 (4814735-4814833) | |
| 574-676, gnl|echTel1|scaffold_123180 (753-655) | |
| 574-676, gnl|echTel1|scaffold_321104 (212940-212821) | |
| 574-676, gnl|fr1|chrUn (124203301-124203179) | |
| 574-676, gnl|fr1|chrUn (124202232-124202139) | |
| 574-676, gnl|hg17|chr12 (56449342-56449461) | |
| 574-676, gnl|Hg17|chr12 (56449455-56449353) | |
| 574-676, gnl|hg17|chrX (24972316-24972414) | |
| 574-676, gnl|loxAfr1|scaffold_119799 (5062-5181) | |
| 574-676, gnl|loxAfr1|scaffold_119799 (5078-5176) | |
| 574-676, gnl|mm7|chr10 (126542618-126542499) | |
| 574-676, gnl|mm7|chr10 (126542602-126542508) | |
| 574-676, gnl|Mm7|chr10 (126542503-126542605) | |
| 574-676, gnl|monDom2|scaffold_283 (154323-154442) | |
| 574-676, gnl|monDom2|scaffold_283 (154339-154435) | |
| 574-676, gnl|oryCun1|scaffold_178366 (48673-48550) | |
| 574-676, gnl|oryCun1|scaffold_178366 (48655-48557) | |
| 574-676, gnl|panTro1|chr10 (57694100-57694219) | |
| 574-676, gnl|panTro1|chrX (25796337-25796435) | |
| 574-676, gnl|rheMac2|chr11 (54858568-54858687) | |
| 574-676, gnl|rheMac2|chrX (23035306-23035403) | |
| 574-676, gnl|tetNig1|chr11 (7092762-7092646) | |
| 574-676, gnl|tetNig1|chr11 (7092746-7092649) | |
| 574-676, gnl|xenTro1|scaffold_34 (1997680-1997561) | |
| 574-676, gnl|xenTro1|scaffold_34 (1997664-1997568) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-111, gnl|bosTau2|chr5 (34348189-34348079) | |
| 1-111, gnl|dasNov1|scaffold_56305 (3714-3788) | |
| 1-111, gnl|echTel1|scaffold_123180 (190-122) | |
| 1-111, gnl|fr1|chrUn (124200078-124200004) | |
| 1-111, gnl|hg17|chr12 (56452020-56452094) | |
| 1-111, gnl|Hg17|chr12 (56452131-56452024) | |
| 1-111, gnl|mm7|chr10 (126539554-126539480) | |
| 1-111, gnl|monDom2|scaffold_283 (157672-157746) | |
| 1-111, gnl|oryCun1|scaffold_178366 (46309-46235) | |
| 1-111, gnl|panTro1|chr10 (57696777-57696851) | |
| 1-111, gnl|rheMac2|chr11 (54861202-54861276) | |
| 1-111, gnl|tetNig1|chr11 (7089697-7089627) | |
| 1-111, gnl|xenTro1|scaffold_34 (1990731-1990660) | |
| 274-463, gnl|bosTau2|chr5 (34346021-34345832) | |
| 274-463, gnl|canFam2|chr10 (4815172-4815351) | |
| 274-463, gnl|danRer3|chr11 (1354652-1354827) | |
| 274-463, gnl|dasNov1|scaffold_913 (150902-150723) | |
| 274-463, gnl|echTel1|scaffold_123180 (535-356) | |
| 274-463, gnl|fr1|chrUn (124200821-124200641) | |
| 274-463, gnl|Hg17|chr12 (56450008-56449819) | |
| 274-463, gnl|hg17|chrX (24972532-24972708) | |
| 274-463, gnl|loxAfr1|scaffold_119799 (5519-5698) | |
| 274-463, gnl|mm7|chr10 (126542125-126541946) | |
| 274-463, gnl|Mm7|chr10 (126541943-126542132) | |
| 274-463, gnl|monDom2|scaffold_283 (154844-155023) | |
| 274-463, gnl|oryCun1|scaffold_178366 (48220-48041) | |
| 274-463, gnl|panTro1|chrX (25796553-25796729) | |
| 274-463, gnl|rheMac2|chrX (23035522-23035698) | |
| 274-463, gnl|tetNig1|chr11 (7090376-7090196) | |
| 274-463, gnl|xenTro1|scaffold_34 (1994404-1994225) | |
| 574-676, gnl|bosTau2|chr5 (34345471-34345369) | |
| 574-676, gnl|canFam2|chr10 (4814719-4814838) | |
| 574-676, gnl|canFam2|chr10 (4814735-4814833) | |
| 574-676, gnl|echTel1|scaffold_123180 (753-655) | |
| 574-676, gnl|echTel1|scaffold_321104 (212940-212821) | |
| 574-676, gnl|fr1|chrUn (124203301-124203179) | |
| 574-676, gnl|fr1|chrUn (124202232-124202139) | |
| 574-676, gnl|hg17|chr12 (56449342-56449461) | |
| 574-676, gnl|Hg17|chr12 (56449455-56449353) | |
| 574-676, gnl|hg17|chrX (24972316-24972414) | |
| 574-676, gnl|loxAfr1|scaffold_119799 (5062-5181) | |
| 574-676, gnl|loxAfr1|scaffold_119799 (5078-5176) | |
| 574-676, gnl|mm7|chr10 (126542618-126542499) | |
| 574-676, gnl|mm7|chr10 (126542602-126542508) | |
| 574-676, gnl|Mm7|chr10 (126542503-126542605) | |
| 574-676, gnl|monDom2|scaffold_283 (154323-154442) | |
| 574-676, gnl|monDom2|scaffold_283 (154339-154435) | |
| 574-676, gnl|oryCun1|scaffold_178366 (48673-48550) | |
| 574-676, gnl|oryCun1|scaffold_178366 (48655-48557) | |
| 574-676, gnl|panTro1|chr10 (57694100-57694219) | |
| 574-676, gnl|panTro1|chrX (25796337-25796435) | |
| 574-676, gnl|rheMac2|chr11 (54858568-54858687) | |
| 574-676, gnl|rheMac2|chrX (23035306-23035403) | |
| 574-676, gnl|tetNig1|chr11 (7092762-7092646) | |
| 574-676, gnl|tetNig1|chr11 (7092746-7092649) | |
| 574-676, gnl|xenTro1|scaffold_34 (1997680-1997561) | |
| 574-676, gnl|xenTro1|scaffold_34 (1997664-1997568) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| eep (0.122564) | |
| cty (0.10408) |