Ss1.1-Mixn-0038b09.5
|
GGGGACAGAGAGTGCACGGGTGGCAGCCGGAGGACCCTGCGTGATGGCCAAGTTTCTTTC
CCAGGACCAAATTAATGAGTACAAGGAATGCTTCTCCCTGTACGACAAGCAGCAGCGAGG
GAAGATTAAGGCCACTGACCTCCTGACTGTGATGAGGTGCCTGGGGGCCAGCCCGACGCC
GGTGGAGGCACAGAGGCACCTGCAGACTCACAAGATAGACAAAAATGGAGAGCTGGATTT
CTCTACTTTCCTGACCATCATGCACATGCAAATGAAACAAGAGGATCCAAAGAAGGAAAT
TCTTTTGGCCATGCTGATGGCAGACAAGGAGAAGAAAGGATACATCATGGCATCTGAACT
GCGGTCCAAACTCATGAAACTGGGGGAGAAGCTCACCCACAAGGAAGTGGATGATCTTTT
CAAGGAAGCAGATATTGAACCTAATGGCAAAGTGAAGTATGACGAATTCATCCACAAGGT
CACCATTCCCGTGCAGGACTACTGAATCAAGAGAAGGAGAGAGCCTCCCCTGGGCCTGAG
AACTCAAACTGATGCATTTTTAAAAAGAAATGTGTTCCTTTCACTGGAGGGAGATGGCAA
ACCCAGCAAGCACACAGAGCTGACCACAGCGGAGAATAGCTTAGTAAGGAAACTAAATGA
CTTCGGCTATGGTATTAGCTAAAACAGCATGTATTTTAATAAAAGACTTTTTTGACTTTA
AAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGGGACAGAGAGTGCACGGGTGGCAGCCGGAGGACCCTGCGTGATGGCCAAGTTTCTTTC
CCAGGACCAAATTAATGAGTACAAGGAATGCTTCTCCCTGTACGACAAGCAGCAGCGAGG
GAAGATTAAGGCCACTGACCTCCTGACTGTGATGAGGTGCCTGGGGGCCAGCCCGACGCC
GGTGGAGGCACAGAGGCACCTGCAGACTCACAAGATAGACAAAAATGGAGAGCTGGATTT
CTCTACTTTCCTGACCATCATGCACATGCAAATGAAACAAGAGGATCCAAAGAAGGAAAT
TCTTTTGGCCATGCTGATGGCAGACAAGGAGAAGAAAGGATACATCATGGCATCTGAACT
GCGGTCCAAACTCATGAAACTGGGGGAGAAGCTCACCCACAAGGAAGTGGATGATCTTTT
CAAGGAAGCAGATATTGAACCTAATGGCAAAGTGAAGTATGACGAATTCATCCACAAGGT
CACCATTCCCGTGCAGGACTACTGAATCAAGAGAAGGAGAGAGCCTCCCCTGGGCCTGAG
AACTCAAACTGATGCATTTTTAAAAAGAAATGTGTTCCTTTCACTGGAGGGAGATGGCAA
ACCCAGCAAGCACACAGAGCTGACCACAGCGGAGAATAGCTTAGTAAGGAAACTAAATGA
CTTCGGCTATGGTATTAGCTAAAACAGCATGTATTTTAATAAAAGACTTTTTTGACTTTA
AAAAAAAAAAAA
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gi|15488820|gb|AAH13541.1| |
Protein identifier
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gi|15488820|gb|AAH13541.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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216-407, gnl|bosTau2|chr10 (9916327-9916518) |
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216-407, gnl|canFam2|chr30 (35230861-35231040) |
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216-407, gnl|danRer3|chrUn (78786492-78786319) |
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216-407, gnl|fr1|chrUn (151071278-151071099) |
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216-407, gnl|galGal2|chr10 (19820429-19820610) |
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216-407, gnl|hg17|chr15 (66276824-66277003) |
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216-407, gnl|Hg17|chr15 (66277023-66276832) |
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216-407, gnl|mm7|chr9 (62899819-62899640) |
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216-407, gnl|Mm7|chr9 (62899618-62899809) |
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216-407, gnl|monDom2|scaffold_12 (43925728-43925549) |
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216-407, gnl|oryCun1|scaffold_204136 (245-66) |
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216-407, gnl|panTro1|chr16 (66786569-66786748) |
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216-407, gnl|rheMac2|chr7 (46796867-46797046) |
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216-407, gnl|rn3|chr8 (67033449-67033270) |
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216-407, gnl|tetNig1|chr13 (11096592-11096766) |
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216-407, gnl|xenTro1|scaffold_5 (294046-294221) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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216-407, gnl|bosTau2|chr10 (9916327-9916518) |
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216-407, gnl|canFam2|chr30 (35230861-35231040) |
|
216-407, gnl|danRer3|chrUn (78786492-78786319) |
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216-407, gnl|fr1|chrUn (151071278-151071099) |
|
216-407, gnl|galGal2|chr10 (19820429-19820610) |
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216-407, gnl|hg17|chr15 (66276824-66277003) |
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216-407, gnl|Hg17|chr15 (66277023-66276832) |
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216-407, gnl|mm7|chr9 (62899819-62899640) |
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216-407, gnl|Mm7|chr9 (62899618-62899809) |
|
216-407, gnl|monDom2|scaffold_12 (43925728-43925549) |
|
216-407, gnl|oryCun1|scaffold_204136 (245-66) |
|
216-407, gnl|panTro1|chr16 (66786569-66786748) |
|
216-407, gnl|rheMac2|chr7 (46796867-46797046) |
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216-407, gnl|rn3|chr8 (67033449-67033270) |
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216-407, gnl|tetNig1|chr13 (11096592-11096766) |
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216-407, gnl|xenTro1|scaffold_5 (294046-294221) |
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pro (1.5361) |
|
duo (1.03681) |
|
lin (0.873617) |
|
cje (0.826173) |
|
aor (0.781097) |
|
gul (0.710353) |
|
ill (0.702371) |
|
rec (0.692281) |
|
bla (0.497389) |
|
nco (0.485201) |
|
csk (0.422238) |
|
col (0.390016) |
|
sin (0.349895) |
|
cki (0.330469) |
|
fat (0.294855) |
|
ski (0.29347) |
|
cte (0.29274) |
|
lyg (0.266205) |
|
kid (0.259471) |
|
mgp (0.230681) |
|
nbm (0.198649) |
|
jej (0.197844) |
|
eje (0.197668) |
|
sto (0.179824) |
|
nje (0.16592) |
|
isp (0.150376) |
|
liv (0.146284) |
|
cst (0.140036) |
|
ste (0.135208) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ldo (0.0970026) |
|
pro (1.5361) |
|
duo (1.03681) |
|
lin (0.873617) |
|
cje (0.826173) |
|
aor (0.781097) |
|
gul (0.710353) |
|
ill (0.702371) |
|
rec (0.692281) |
|
bla (0.497389) |
|
nco (0.485201) |
|
csk (0.422238) |
|
col (0.390016) |
|
sin (0.349895) |
|
cki (0.330469) |
|
fat (0.294855) |
|
ski (0.29347) |
|
cte (0.29274) |
|
lyg (0.266205) |
|
kid (0.259471) |
|
mgp (0.230681) |
|
nbm (0.198649) |
|
jej (0.197844) |
|
eje (0.197668) |
|
sto (0.179824) |
|
nje (0.16592) |
|
isp (0.150376) |
|
liv (0.146284) |
|
cst (0.140036) |
|
ste (0.135208) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ldo (0.0970026) |