Non-Coding RNA Search

Ss1.1-Mixn-0038n18.5

Sequence:


               
               GCCATGTGCAGATTGGGGTTTTGCTGCCACAAGCCAGGGAACCATATGAAGCGTGGAGAG
GGACCTGCAGGGTGGGAGAGGAGGGGCACAGCCCCGCCTGCTGCTTTAGCCTGGACTTCT
AGCTCCAGAACCACAAGATAATAAATTTCTGTCGTGGGACCATCGATGTGTGGTGCCCTG
TTATGGCAGCCCCGGCACACCGGGCGTCTGTCTGTGCCGCTCCCGAGGCTGTCCACAGTC
CTTGGTCTGTGCCCTTTCCTCCATCTGCAAAACCAGAGATGTCGCATCTCTCTGATCCTC
TGTTCGTAGTCACCCACCTCTACCCACGGCCGGGAAAGTCTCTCCAGTCCAAAGGGATCA
CGCCATTACCTGGGGCCCACCTGGATGAGCCAGGAGAAGCGCCCCGTCTCAAGGTCCTCA
CCTCCACCCTGGTTGCAAAGACCCTTTGCCATAGTTCCTACGGGATCAGTGGGCTCAGCC
TTTGCAGACAGATAAATCTCTCCACAACACAAAGAACGCTGTGTGAAACATTTGCTGAAA
CTGAAACAACTTTCAAGGATAATGGGGATCGTCTGATGAACACTTCTTTTTCCCATTCCT
TTCATAATTAAAAGGAAAATTTTAAGCTCAGGCAAGGCAGTGGAAATGTACCTAATGAAA
ATTCTGTTGGACCCATTCCATTTTCTTGGTTTGTTGCCAGACTAAGTATTAAATGTTAGT
GCAAACAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG
GGGGGGGCTTAATCAGGAATCAGACCTAGTAGGAGTGGGGGGGGGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATGTGCAGATTGGGGTTTTGCTGCCACAAGCCAGGGAACCATATGAAGCGTGGAGAG
GGACCTGCAGGGTGGGAGAGGAGGGGCACAGCCCCGCCTGCTGCTTTAGCCTGGACTTCT
AGCTCCAGAACCACAAGATAATAAATTTCTGTCGTGGGACCATCGATGTGTGGTGCCCTG
TTATGGCAGCCCCGGCACACCGGGCGTCTGTCTGTGCCGCTCCCGAGGCTGTCCACAGTC
CTTGGTCTGTGCCCTTTCCTCCATCTGCAAAACCAGAGATGTCGCATCTCTCTGATCCTC
TGTTCGTAGTCACCCACCTCTACCCACGGCCGGGAAAGTCTCTCCAGTCCAAAGGGATCA
CGCCATTACCTGGGGCCCACCTGGATGAGCCAGGAGAAGCGCCCCGTCTCAAGGTCCTCA
CCTCCACCCTGGTTGCAAAGACCCTTTGCCATAGTTCCTACGGGATCAGTGGGCTCAGCC
TTTGCAGACAGATAAATCTCTCCACAACACAAAGAACGCTGTGTGAAACATTTGCTGAAA
CTGAAACAACTTTCAAGGATAATGGGGATCGTCTGATGAACACTTCTTTTTCCCATTCCT
TTCATAATTAAAAGGAAAATTTTAAGCTCAGGCAAGGCAGTGGAAATGTACCTAATGAAA
ATTCTGTTGGACCCATTCCATTTTCTTGGTTTGTTGCCAGACTAAGTATTAAATGTTAGT
GCAAACAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG
GGGGGGGCTTAATCAGGAATCAGACCTAGTAGGAGTGGGGGGGGGGAC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               225-453, gnl|bosTau2|chr2 (66868593-66868821)
               

               
               225-453, gnl|Hg17|chr2 (221875187-221874960)
               


               
               454-732, gnl|bosTau2|chr14 (11128029-11127754)
               

               
               454-732, gnl|Hg17|chr8 (57932871-57933462)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               225-453, gnl|bosTau2|chr2 (66868593-66868821)
               

               
               225-453, gnl|Hg17|chr2 (221875187-221874960)
               


               
               454-732, gnl|bosTau2|chr14 (11128029-11127754)
               

               
               454-732, gnl|Hg17|chr8 (57932871-57933462)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	225-453, gnl\|bosTau2\|chr2 (66868593-66868821)
	225-453, gnl\|Hg17\|chr2 (221875187-221874960)

	454-732, gnl\|bosTau2\|chr14 (11128029-11127754)
	454-732, gnl\|Hg17\|chr8 (57932871-57933462)