Non-Coding RNA Search

Ss1.1-Mixn-0039b11.5

Sequence:


               
               GGGTTAAGAATCTGACTTCAGCAGCTTTGGTTTGCTGAGGAGGCATGGGTCCAATACCCA
ACCTGGCACAGTAGCTGCAACTCGGATTTAGTCCCTGGCGTAGGAACTTCCATATGCTGT
GAGTATAGCCATTAAGGGGAAAAAAAATTTTTTTCAAAGATCTTGCATAGGTCTTTAAAT
AGACTGGACGCTGAATGAAGGCTTTGACTTAATAGACTTCCTGCCCCTCTGCCTTTGCCC
CTTAGGAATGCACAGTCTCATTGCCACAGGCCATCTATTGTCAGTGGATCCAGACAGAAT
GGTCATCAAGAGAGTTGTTCTGAGTGGTCATCCTTTTAAAATTTTTACTAAGATGGCCGT
GGTGCGTTACATGTTCTTCAGCAGAGGTAGGTGTGAAGGACGGGGTCTAGCTGCCTCTGT
GGGGTGAGGTTGGGTTTAATTTTGTGGGTAAATGTTTCATCTTGGTCTTCTGTGTGTGTT
TCATTCTAAGAGGATGTGCTGTGGTTTAAACCAGTGGAACTGAGAACAAAGTGGGGACGT
AGGGGATACATCAAGGAGCCTTTAGGTAAGAGAATGTGGGATTTGGGATCTTGTTTAGAT
TTCCCCAGTGCTACTAAATGATGATTGGGTTAAAAGGCCACTGCTTTAAAATTGTTCTGT
TTCAATTTGACCAACTAGCTCTGTTTTCTTTCTAGGTACTCATGGCCACATGAAGTGCAG
TTTTGATGGGAAGCTAAAATCTCAGGACACAGTACTGATGAACCTCTATAAACGAGCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTTAAGAATCTGACTTCAGCAGCTTTGGTTTGCTGAGGAGGCATGGGTCCAATACCCA
ACCTGGCACAGTAGCTGCAACTCGGATTTAGTCCCTGGCGTAGGAACTTCCATATGCTGT
GAGTATAGCCATTAAGGGGAAAAAAAATTTTTTTCAAAGATCTTGCATAGGTCTTTAAAT
AGACTGGACGCTGAATGAAGGCTTTGACTTAATAGACTTCCTGCCCCTCTGCCTTTGCCC
CTTAGGAATGCACAGTCTCATTGCCACAGGCCATCTATTGTCAGTGGATCCAGACAGAAT
GGTCATCAAGAGAGTTGTTCTGAGTGGTCATCCTTTTAAAATTTTTACTAAGATGGCCGT
GGTGCGTTACATGTTCTTCAGCAGAGGTAGGTGTGAAGGACGGGGTCTAGCTGCCTCTGT
GGGGTGAGGTTGGGTTTAATTTTGTGGGTAAATGTTTCATCTTGGTCTTCTGTGTGTGTT
TCATTCTAAGAGGATGTGCTGTGGTTTAAACCAGTGGAACTGAGAACAAAGTGGGGACGT
AGGGGATACATCAAGGAGCCTTTAGGTAAGAGAATGTGGGATTTGGGATCTTGTTTAGAT
TTCCCCAGTGCTACTAAATGATGATTGGGTTAAAAGGCCACTGCTTTAAAATTGTTCTGT
TTCAATTTGACCAACTAGCTCTGTTTTCTTTCTAGGTACTCATGGCCACATGAAGTGCAG
TTTTGATGGGAAGCTAAAATCTCAGGACACAGTACTGATGAACCTCTATAAACGAGCCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               151-776, gnl|bosTau2|chr19 (17834016-17833396)
               

               
               151-776, gnl|Hg17|chr17 (2174968-2174338)
               

               
               151-776, gnl|Mm7|chr11 (74989330-74989882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               151-776, gnl|bosTau2|chr19 (17834016-17833396)
               

               
               151-776, gnl|Hg17|chr17 (2174968-2174338)
               

               
               151-776, gnl|Mm7|chr11 (74989330-74989882)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ecc (0.115035)

	151-776, gnl\|bosTau2\|chr19 (17834016-17833396)
	151-776, gnl\|Hg17\|chr17 (2174968-2174338)
	151-776, gnl\|Mm7\|chr11 (74989330-74989882)