Ss1.1-Mixn-0039j06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGCCGAGCCGCAGGCTTCCTGGCGCAGCGGGGCGGCCCCGAACCCCAGCGGGAAGATG TTCAACGTGGAGTCCTTGGAGCGGGTGGAGCTGTGCGAGAGCCTCCTCACTTGGATCCAG ACATTTAATGTGGATGCGCCATGCCAGACCGTGGAAGATTTAACGAATGGGGTTGTGATG GCCCAGGCTCTTCAGAAGATAGATCCTGCATACTTTGATGAAAATTGGCTAAACAGAATC AAAACTGAAGTAGGAGATAATTGGAGGCTAAAGATAAGCAATTTAAAGAAAATTTTGAAG GGAATCCTGGATTACAATCATGAGATTTTAGGGCAGCAGATTAATGACTTTACCCTTCCT GATGTGAACCTCATTGGAGAACATTCTGATGCCGCGGAGCTGGGAAGGATGCTGCAACTC ATCTTGGGCTGTGCAGTGAACTGTGAACAGAAGCAAGAGTACATCCAAGCCATTATGATG ATGGAGGAGTCTGTTCAGCATGTTGTCATGACAGCCATTCAGGAGCTGATGAGTAAAGAG TCTCCTGTCTCTGCTGGAAATGATGCCTACGTTGACCTTGATCGCCAGCTGAAGAAAACG TCAGAGGAACTAAATGAAGCTTTGTCAGCCAAGGAAGAAATCGCTCAAAGGTGCCATGAG TTGGATCTGCAGGTCGCAGCGTTGCAGGAGGAGAAGAGTAGCCTGTTGGCTGAGAATCAG GTGTTAATGGAAAGACTTAATCAGTCTGATTCCATAGAAGATCCTAACAGCCCAGCAGGA AGAAGGCACCTGCAACTCCAGACTCAGTTAGAACAGCTCCAGGAAGAGACATTCAGACTT GAAGCAGCCAAAGATGATTATCGAATACGCTGTGAAGAGTTAGAGAAGGAGATCTCTGAA CTCCGGCAGCAGAATGATGAGCTTACCACTTTGGCAGATGATGCCCAGTCTCTCAAAGAT GAAATAGATGTTCTCAGGCATTCTTCTGATAAGGTGTCTAAACTGGAAGGCCAAGTGGAA TCATATAAAAAGAAGCTAGAGGATCTTGGTGATCTGCGGAGGCAGGTTAAACTCTTAGAA GAGAAGAATACTATGTATATGCAGAACACTGTCAGTCTAGAGGAAGAGCTTAGAAAAGCC AATGCAGCTCGAAGTCAACTGGAGACATATAAGAGACAGGTAGTAGAACTGCAAAATAGA TTATCTGAAGAATCAAAGAAAGCAGATAAATTAGATTTTGAATATAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGCCGAGCCGCAGGCTTCCTGGCGCAGCGGGGCGGCCCCGAACCCCAGCGGGAAGATG TTCAACGTGGAGTCCTTGGAGCGGGTGGAGCTGTGCGAGAGCCTCCTCACTTGGATCCAG ACATTTAATGTGGATGCGCCATGCCAGACCGTGGAAGATTTAACGAATGGGGTTGTGATG GCCCAGGCTCTTCAGAAGATAGATCCTGCATACTTTGATGAAAATTGGCTAAACAGAATC AAAACTGAAGTAGGAGATAATTGGAGGCTAAAGATAAGCAATTTAAAGAAAATTTTGAAG GGAATCCTGGATTACAATCATGAGATTTTAGGGCAGCAGATTAATGACTTTACCCTTCCT GATGTGAACCTCATTGGAGAACATTCTGATGCCGCGGAGCTGGGAAGGATGCTGCAACTC ATCTTGGGCTGTGCAGTGAACTGTGAACAGAAGCAAGAGTACATCCAAGCCATTATGATG ATGGAGGAGTCTGTTCAGCATGTTGTCATGACAGCCATTCAGGAGCTGATGAGTAAAGAG TCTCCTGTCTCTGCTGGAAATGATGCCTACGTTGACCTTGATCGCCAGCTGAAGAAAACG TCAGAGGAACTAAATGAAGCTTTGTCAGCCAAGGAAGAAATCGCTCAAAGGTGCCATGAG TTGGATCTGCAGGTCGCAGCGTTGCAGGAGGAGAAGAGTAGCCTGTTGGCTGAGAATCAG GTGTTAATGGAAAGACTTAATCAGTCTGATTCCATAGAAGATCCTAACAGCCCAGCAGGA AGAAGGCACCTGCAACTCCAGACTCAGTTAGAACAGCTCCAGGAAGAGACATTCAGACTT GAAGCAGCCAAAGATGATTATCGAATACGCTGTGAAGAGTTAGAGAAGGAGATCTCTGAA CTCCGGCAGCAGAATGATGAGCTTACCACTTTGGCAGATGATGCCCAGTCTCTCAAAGAT GAAATAGATGTTCTCAGGCATTCTTCTGATAAGGTGTCTAAACTGGAAGGCCAAGTGGAA TCATATAAAAAGAAGCTAGAGGATCTTGGTGATCTGCGGAGGCAGGTTAAACTCTTAGAA GAGAAGAATACTATGTATATGCAGAACACTGTCAGTCTAGAGGAAGAGCTTAGAAAAGCC AATGCAGCTCGAAGTCAACTGGAGACATATAAGAGACAGGTAGTAGAACTGCAAAATAGA TTATCTGAAGAATCAAAGAAAGCAGATAAATTAGATTTTGAATATAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 6-114, gnl|bosTau2|chr27 (24076965-24077072) | |
| 6-114, gnl|canFam2|chr16 (25855674-25855537) | |
| 6-114, gnl|echTel1|scaffold_297439 (4623-4473) | |
| 6-114, gnl|galGal2|chrUn (70390323-70390220) | |
| 6-114, gnl|hg17|chr8 (42871387-42871531) | |
| 6-114, gnl|Hg17|chr8 (42871397-42871488) | |
| 6-114, gnl|loxAfr1|scaffold_8415 (66273-66420) | |
| 6-114, gnl|mm7|chr8 (24875550-24875413) | |
| 6-114, gnl|Mm7|chr8 (24875553-24875447) | |
| 6-114, gnl|monDom2|scaffold_1 (79064033-79063885) | |
| 6-114, gnl|oryCun1|scaffold_172629 (3091-2944) | |
| 6-114, gnl|panTro1|chr7 (44351132-44351276) | |
| 6-114, gnl|rheMac2|chr8 (43501384-43501528) | |
| 323-464, gnl|bosTau2|chr27 (24432181-24432040) | |
| 323-464, gnl|canFam2|chr16 (25817532-25817393) | |
| 323-464, gnl|danRer3|chrUn (43600782-43600643) | |
| 323-464, gnl|dasNov1|scaffold_133234 (1986-1866) | |
| 323-464, gnl|echTel1|scaffold_305411 (50132-50011) | |
| 323-464, gnl|fr1|chrUn (71456128-71455989) | |
| 323-464, gnl|galGal2|chrZ (25592146-25592285) | |
| 323-464, gnl|hg17|chr8 (42917610-42917749) | |
| 323-464, gnl|Hg17|chr8 (42917611-42917752) | |
| 323-464, gnl|loxAfr1|scaffold_29714 (3933-4072) | |
| 323-464, gnl|mm7|chr8 (24844686-24844547) | |
| 323-464, gnl|Mm7|chr8 (24844683-24844540) | |
| 323-464, gnl|monDom2|scaffold_1 (79013649-79013510) | |
| 323-464, gnl|oryCun1|scaffold_85970 (2042-1903) | |
| 323-464, gnl|panTro1|chr7 (44402183-44402322) | |
| 323-464, gnl|rheMac2|chr8 (43547432-43547571) | |
| 323-464, gnl|rn3|chr16 (70369614-70369753) | |
| 323-464, gnl|tetNig1|chrUn_random (90803683-90803819) | |
| 323-464, gnl|xenTro1|scaffold_788 (545112-545234) | |
| 670-836, gnl|bosTau2|chr27 (24102367-24102533) | |
| 670-836, gnl|Hg17|chr8 (42938608-42938774) | |
| 670-836, gnl|Mm7|chr8 (24828912-24828746) | |
| 970-1182, gnl|bosTau2|chr27 (24107002-24107213) | |
| 970-1182, gnl|Hg17|chr8 (42942306-42942517) | |
| 970-1182, gnl|Mm7|chr8 (24826771-24826560) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-114, gnl|bosTau2|chr27 (24076965-24077072) | |
| 6-114, gnl|canFam2|chr16 (25855674-25855537) | |
| 6-114, gnl|echTel1|scaffold_297439 (4623-4473) | |
| 6-114, gnl|galGal2|chrUn (70390323-70390220) | |
| 6-114, gnl|hg17|chr8 (42871387-42871531) | |
| 6-114, gnl|Hg17|chr8 (42871397-42871488) | |
| 6-114, gnl|loxAfr1|scaffold_8415 (66273-66420) | |
| 6-114, gnl|mm7|chr8 (24875550-24875413) | |
| 6-114, gnl|Mm7|chr8 (24875553-24875447) | |
| 6-114, gnl|monDom2|scaffold_1 (79064033-79063885) | |
| 6-114, gnl|oryCun1|scaffold_172629 (3091-2944) | |
| 6-114, gnl|panTro1|chr7 (44351132-44351276) | |
| 6-114, gnl|rheMac2|chr8 (43501384-43501528) | |
| 323-464, gnl|bosTau2|chr27 (24432181-24432040) | |
| 323-464, gnl|canFam2|chr16 (25817532-25817393) | |
| 323-464, gnl|danRer3|chrUn (43600782-43600643) | |
| 323-464, gnl|dasNov1|scaffold_133234 (1986-1866) | |
| 323-464, gnl|echTel1|scaffold_305411 (50132-50011) | |
| 323-464, gnl|fr1|chrUn (71456128-71455989) | |
| 323-464, gnl|galGal2|chrZ (25592146-25592285) | |
| 323-464, gnl|hg17|chr8 (42917610-42917749) | |
| 323-464, gnl|Hg17|chr8 (42917611-42917752) | |
| 323-464, gnl|loxAfr1|scaffold_29714 (3933-4072) | |
| 323-464, gnl|mm7|chr8 (24844686-24844547) | |
| 323-464, gnl|Mm7|chr8 (24844683-24844540) | |
| 323-464, gnl|monDom2|scaffold_1 (79013649-79013510) | |
| 323-464, gnl|oryCun1|scaffold_85970 (2042-1903) | |
| 323-464, gnl|panTro1|chr7 (44402183-44402322) | |
| 323-464, gnl|rheMac2|chr8 (43547432-43547571) | |
| 323-464, gnl|rn3|chr16 (70369614-70369753) | |
| 323-464, gnl|tetNig1|chrUn_random (90803683-90803819) | |
| 323-464, gnl|xenTro1|scaffold_788 (545112-545234) | |
| 670-836, gnl|bosTau2|chr27 (24102367-24102533) | |
| 670-836, gnl|Hg17|chr8 (42938608-42938774) | |
| 670-836, gnl|Mm7|chr8 (24828912-24828746) | |
| 970-1182, gnl|bosTau2|chr27 (24107002-24107213) | |
| 970-1182, gnl|Hg17|chr8 (42942306-42942517) | |
| 970-1182, gnl|Mm7|chr8 (24826771-24826560) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) |