Non-Coding RNA Search

Ss1.1-Mus1-POSM0100008_H04.3

Sequence:


               
               ATATATTTTGAAGTAGGCCTGCTAATTTTCAGGCCAAAGAGATTTAAGGGCTAGATCATC
CTTGTAAATGCTCTTTTAGGCTAGCCTTTTTTTCTTGTGCCAGAATCTTCTAAAAATCAT
CACACAGACCTGTGGTCAGAGTAATGAAACAGGAGCCTTAAACTAAATGAATTTCTAAAA
TGAAACTTTGGCCTAGAGTTGGAAGCCATATTAAGTATGTTATAATGTAGATTTTTCTGG
AGATAAACTTTGTTGGTGGCTCTATCCCCAAAGGAGTTTGCTCAGGCTTTTAAATGAGGA
CTGCCACTTTATCAACATCAGTTATTTTCCTAGAATGAGGATTAAGTGTTAAGTCCCATT
GTTTTTTACCTAATGCTTCCTTTTGGATCTATTTTATAAAACTCAAGAGTTTCTTTGCCC
CAGTCTGGAAAATGACTAGAATATTAGATGTATAGGGATTTTGAGTTTACCCTATGTAAT
TGACATGATTAATACAAATAATACTGGAAACTGTCAATTTTGGAAGCAACATTTAAATTA
TTTCAATTTTGTGAATAAAGAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATATTTTGAAGTAGGCCTGCTAATTTTCAGGCCAAAGAGATTTAAGGGCTAGATCATC
CTTGTAAATGCTCTTTTAGGCTAGCCTTTTTTTCTTGTGCCAGAATCTTCTAAAAATCAT
CACACAGACCTGTGGTCAGAGTAATGAAACAGGAGCCTTAAACTAAATGAATTTCTAAAA
TGAAACTTTGGCCTAGAGTTGGAAGCCATATTAAGTATGTTATAATGTAGATTTTTCTGG
AGATAAACTTTGTTGGTGGCTCTATCCCCAAAGGAGTTTGCTCAGGCTTTTAAATGAGGA
CTGCCACTTTATCAACATCAGTTATTTTCCTAGAATGAGGATTAAGTGTTAAGTCCCATT
GTTTTTTACCTAATGCTTCCTTTTGGATCTATTTTATAAAACTCAAGAGTTTCTTTGCCC
CAGTCTGGAAAATGACTAGAATATTAGATGTATAGGGATTTTGAGTTTACCCTATGTAAT
TGACATGATTAATACAAATAATACTGGAAACTGTCAATTTTGGAAGCAACATTTAAATTA
TTTCAATTTTGTGAATAAAGAAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               32-564, gnl|bosTau2|chr9 (66174-66688)
               

               
               32-564, gnl|Hg17|chr6 (64455287-64455843)
               

               
               32-564, gnl|Mm7|chr1 (31051785-31051173)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-564, gnl|bosTau2|chr9 (66174-66688)
               

               
               32-564, gnl|Hg17|chr6 (64455287-64455843)
               

               
               32-564, gnl|Mm7|chr1 (31051785-31051173)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	32-564, gnl\|bosTau2\|chr9 (66174-66688)
	32-564, gnl\|Hg17\|chr6 (64455287-64455843)
	32-564, gnl\|Mm7\|chr1 (31051785-31051173)