Non-Coding RNA Search

Ss1.1-Mus1-POSM0100009_E01F.5

Sequence:


               
               ATTCAGGCTTGCTTTAGGATGGGGAAAAAGTCTTTGATTTATTGGGAACAGTGTCCCAAA
TATCTTTCCCCGTGCAATTTCTCAAAAAACCACGGATGGTTTTACACAGTTGAAGACAAG
GACGGTTTAACCCCCGGCACCGCAAAGACCGGATAGGCGATGACAGCCAGGAGTTTCCCT
CTTCCGGATCACCAGAGCCATGTGATCAGCGCAGCAGGGCCCTGCTACCTCGGTTTCTCG
TCCACCAAAGTCTCAACATCAGAAGCTTTTCACTTAAAAAGCTTGATAAAGCAATTGATG
AAACCGTCAAGGAAGAAAACACAGGATACCCCTAAGTACAGCAATGTCTTCTTTACAACC
ACCAGACTTAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCAGGCTTGCTTTAGGATGGGGAAAAAGTCTTTGATTTATTGGGAACAGTGTCCCAAA
TATCTTTCCCCGTGCAATTTCTCAAAAAACCACGGATGGTTTTACACAGTTGAAGACAAG
GACGGTTTAACCCCCGGCACCGCAAAGACCGGATAGGCGATGACAGCCAGGAGTTTCCCT
CTTCCGGATCACCAGAGCCATGTGATCAGCGCAGCAGGGCCCTGCTACCTCGGTTTCTCG
TCCACCAAAGTCTCAACATCAGAAGCTTTTCACTTAAAAAGCTTGATAAAGCAATTGATG
AAACCGTCAAGGAAGAAAACACAGGATACCCCTAAGTACAGCAATGTCTTCTTTACAACC
ACCAGACTTAGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-372, gnl|bosTau2|chr26 (21853538-21853864)
               

               
               53-372, gnl|Hg17|chr10 (116045181-116045578)
               

               
               53-372, gnl|Mm7|chr19 (56828838-56829139)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-372, gnl|bosTau2|chr26 (21853538-21853864)
               

               
               53-372, gnl|Hg17|chr10 (116045181-116045578)
               

               
               53-372, gnl|Mm7|chr19 (56828838-56829139)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	53-372, gnl\|bosTau2\|chr26 (21853538-21853864)
	53-372, gnl\|Hg17\|chr10 (116045181-116045578)
	53-372, gnl\|Mm7\|chr19 (56828838-56829139)