Non-Coding RNA Search

Ss1.1-Mus1-POSM0100013_E09F.5

Sequence:


               
               CCACGCGTCCGCTTCCAGTGCCTGGAGTGAAATGGTATCGAAATAAATCTTTGCTAGAGC
CAGATGAAAGAATCAAAATGGAAAGGGTGGGTAACGTGTGTTCTTTGGAAATTGCCAACA
TCCAAAAAGGAGAGGGAGGAGAGTACATGTGCCATGCTGTCAACATCATAGGGGAGGCAA
AGAGCTTTGCAAATGTAGACGTAGTGCCCCAAAAAGAGAGAGCAGTGGCCCTCCCGCCTC
CAGTAACACATCAGCATGTCATGGAGTTCGATTTGGAAAACACTGCATCATCAAGGACAC
CTTCCCCTCAAGAAATTGTCCTGGAAGTTGAATTAAGTGAGAAAGATGTTAAAGAATTTG
AGAAGCAAGTGAAAATAGTCACAGTTCCTGAATTTACTCCTGATCACAAAAGCATGGTTG
TGAGTCTGGATGTTCTTCCACTGAATTTAGCAGATCCAAATATGGCTTCAAGGGAGGAAG
AAGACAAAGATTTAACAATTGATTTAGAAGTATTTGAAATGCCTCCTCGTTTTATAATGC
CTATTTGTGATTTTAAAATTCCAGAAAACTCAGATGCCATGTTCAAATGTTCAGTTATAG
GCATCCCAACTCCCGAAGTGAAATGGTATAAAGAATATATGTGCATTGAGCCTGATGATG
TCAAATATGTGATTAGTGAGGAGAATGGAAGTCATACCCTNTAAATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACGCGTCCGCTTCCAGTGCCTGGAGTGAAATGGTATCGAAATAAATCTTTGCTAGAGC
CAGATGAAAGAATCAAAATGGAAAGGGTGGGTAACGTGTGTTCTTTGGAAATTGCCAACA
TCCAAAAAGGAGAGGGAGGAGAGTACATGTGCCATGCTGTCAACATCATAGGGGAGGCAA
AGAGCTTTGCAAATGTAGACGTAGTGCCCCAAAAAGAGAGAGCAGTGGCCCTCCCGCCTC
CAGTAACACATCAGCATGTCATGGAGTTCGATTTGGAAAACACTGCATCATCAAGGACAC
CTTCCCCTCAAGAAATTGTCCTGGAAGTTGAATTAAGTGAGAAAGATGTTAAAGAATTTG
AGAAGCAAGTGAAAATAGTCACAGTTCCTGAATTTACTCCTGATCACAAAAGCATGGTTG
TGAGTCTGGATGTTCTTCCACTGAATTTAGCAGATCCAAATATGGCTTCAAGGGAGGAAG
AAGACAAAGATTTAACAATTGATTTAGAAGTATTTGAAATGCCTCCTCGTTTTATAATGC
CTATTTGTGATTTTAAAATTCCAGAAAACTCAGATGCCATGTTCAAATGTTCAGTTATAG
GCATCCCAACTCCCGAAGTGAAATGGTATAAAGAATATATGTGCATTGAGCCTGATGATG
TCAAATATGTGATTAGTGAGGAGAATGGAAGTCATACCCTNTAAATCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-706, gnl|bosTau2|chr2 (7665205-7665896)
               

               
               12-706, gnl|Hg17|chr2 (179437008-179436314)
               

               
               12-706, gnl|Mm7|chr2 (76759083-76758389)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-706, gnl|bosTau2|chr2 (7665205-7665896)
               

               
               12-706, gnl|Hg17|chr2 (179437008-179436314)
               

               
               12-706, gnl|Mm7|chr2 (76759083-76758389)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nms (0.213858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)

	12-706, gnl\|bosTau2\|chr2 (7665205-7665896)
	12-706, gnl\|Hg17\|chr2 (179437008-179436314)
	12-706, gnl\|Mm7\|chr2 (76759083-76758389)