Ss1.1-OvF2-UMC-p2mm4-009-b03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATGACTGAGTTTTAATGGAGTGGAATACTTCTTTTTAGAGACTATTCCCTGGACTTGCC ACAGAACTCATTTAAAAAAAAAAAAAACAAGTTTTGAAGCAGCACTCAGAATATTGTTTA CTTAAATTCTTAATGGCCTTAATTCTCAAATTCCTGTCCCATCGCTTACAGAATCAGTCC ACTTTGGCCTGGTGAAAAGGAAGGGGTAGCACTTTCTAAGGCTGCAGGCTGTCCCTCAGT TAAGGAGGTGAAGAATGTAGTGGGTGTACCTTGAACTGTGCAAAGCATAGTGAAATTCAG TTCGCAGCATAACAACTGCTTGGGATATCCATGCCAGGAAAAGGAAATTTCTGGCAAATA TTTTGTCACTGCTGTAAAGCAAAATATTTGTTAAAGTGCCAAAATAAAGTCTGTCATGCT GAAAGTAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATGACTGAGTTTTAATGGAGTGGAATACTTCTTTTTAGAGACTATTCCCTGGACTTGCC ACAGAACTCATTTAAAAAAAAAAAAAACAAGTTTTGAAGCAGCACTCAGAATATTGTTTA CTTAAATTCTTAATGGCCTTAATTCTCAAATTCCTGTCCCATCGCTTACAGAATCAGTCC ACTTTGGCCTGGTGAAAAGGAAGGGGTAGCACTTTCTAAGGCTGCAGGCTGTCCCTCAGT TAAGGAGGTGAAGAATGTAGTGGGTGTACCTTGAACTGTGCAAAGCATAGTGAAATTCAG TTCGCAGCATAACAACTGCTTGGGATATCCATGCCAGGAAAAGGAAATTTCTGGCAAATA TTTTGTCACTGCTGTAAAGCAAAATATTTGTTAAAGTGCCAAAATAAAGTCTGTCATGCT GAAAGTAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 238-432, + strand, RNAz p=0.988127 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 238-432, + strand, RNAz p=0.988127 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_002998, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 11-432, gnl|bosTau2|chr14 (41825457-41825046) | |
| 11-432, gnl|Hg17|chr8 (97692764-97693176) | |
| 11-432, gnl|Mm7|chr15 (33142964-33143354) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 11-432, gnl|bosTau2|chr14 (41825457-41825046) | |
| 11-432, gnl|Hg17|chr8 (97692764-97693176) | |
| 11-432, gnl|Mm7|chr15 (33142964-33143354) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fbs (0.175346) | |
| rec (0.17307) | |
| ute (0.132784) | |
| ova (0.129132) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| rec (0.17307) | |
| ute (0.132784) | |
| ova (0.129132) |