Non-Coding RNA Search

Ss1.1-OvF4-UMC-p4mm3-013-d12.3

Sequence:


               
               GGTATTTTACAATTCTGCCTCCCACAGGCAGTAACTCTGCCCATCACACTATGGGTGGAA
TTTTCTCCTGAAAAGGTGGGCCCTAGAAGCCTCATTTGTTTTCTCCATGGAAAAGAACAG
CCCTCAGCTGCAGCATTCAACTTGTGTGTTTACTGAATGGACTACAGAAATAGCTTTTCT
TCCTAAAGGGGATTATTCTGTATTTTAAGTTATTTTTTAATAAAATTTAATTATGTTGTG
TATTGTGCTTCTTAACAGAAAATGCATTATTGGACTCTTTTTGTAATGTCCTGTTTACTG
CACATGAAACGTGATATAGCTGGTATTGTTCAAAAACTGTAGAAAATACTTTTGTACATG
TTGGTAATGTCTAATTTGTATACACTTCATTTAAATTTCCCTAAAACTTGAAAGGGGGAC
CTTGTAGAAATTAAAATATATACTTAGTCTTAAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTATTTTACAATTCTGCCTCCCACAGGCAGTAACTCTGCCCATCACACTATGGGTGGAA
TTTTCTCCTGAAAAGGTGGGCCCTAGAAGCCTCATTTGTTTTCTCCATGGAAAAGAACAG
CCCTCAGCTGCAGCATTCAACTTGTGTGTTTACTGAATGGACTACAGAAATAGCTTTTCT
TCCTAAAGGGGATTATTCTGTATTTTAAGTTATTTTTTAATAAAATTTAATTATGTTGTG
TATTGTGCTTCTTAACAGAAAATGCATTATTGGACTCTTTTTGTAATGTCCTGTTTACTG
CACATGAAACGTGATATAGCTGGTATTGTTCAAAAACTGTAGAAAATACTTTTGTACATG
TTGGTAATGTCTAATTTGTATACACTTCATTTAAATTTCCCTAAAACTTGAAAGGGGGAC
CTTGTAGAAATTAAAATATATACTTAGTCTTAAGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-456, gnl|bosTau2|chr22 (14309452-14309005)
               

               
               5-456, gnl|Hg17|chr3 (42664792-42665234)
               

               
               5-456, gnl|Mm7|chr9 (121458562-121458937)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-456, gnl|bosTau2|chr22 (14309452-14309005)
               

               
               5-456, gnl|Hg17|chr3 (42664792-42665234)
               

               
               5-456, gnl|Mm7|chr9 (121458562-121458937)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               pro (0.512033)
               

               
               fhi (0.169578)
               

               
               lnt (0.142308)
               

               
               ova (0.129132)
               

               
               eru (0.120048)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               fhi (0.169578)
               

               
               lnt (0.142308)
               

               
               ova (0.129132)
               

               
               eru (0.120048)

	5-456, gnl\|bosTau2\|chr22 (14309452-14309005)
	5-456, gnl\|Hg17\|chr3 (42664792-42665234)
	5-456, gnl\|Mm7\|chr9 (121458562-121458937)

	pro (0.512033)
	fhi (0.169578)
	lnt (0.142308)
	ova (0.129132)
	eru (0.120048)