Non-Coding RNA Search

Ss1.1-OvF4-UMC-p4mm3-020-d09.3

Sequence:


               
               GGGGACGCCCGCGCGCGCGCCTTCGACGCCCAGTCTGGAGCCCTGCGGAGGGTGTTCCGC
GGCCACGCCTTCATCATCAACTGCATCCAGGTGCACGGCCAGGTGCTCTACACCGCCTCG
CACGACGGCGCGCTGCGCCTCTGGGACGTGCGGGGGCTTCCGCCGCCGCGCCGCGCCGCC
CCCAAGCGCAGCCTCTCGCGCCTCTTCAGCAACAAGGTGGGCTGCGCCGCCGCAGCGCCC
CTGCAGCCGGCCTGAGGCCCCCGGATCCGCCGAGGGAGCGCGGCCCGCCCGCCCGAGGGC
CCCCAGCGGGCGAAGGCGACACATGGGGCCTTGCCTCCGCGTCGGAGGACCTCCGAAGCC
GTCTCCCGTGGGGAGACTGTGCTTGGCCCGGACCGCGTCCCCAACCTGCCCGCCTGTCTG
TCCCCACCCTCTTCAGCCCAGCCCTCAGCCTGCGCTCCGGCCCACCCGGGACCCTCCCAA
TTCTCAGGGTCTCCAGCCCCACGACCTGGGGCGCCTGCTGAGCGAAACGGACGCTTCAAA
ATGCCGCTGAGCCACAAACTGTCGTTATTCTGGCCAATTGTACAACTTGTGCAGAAGCGA
AATACAGGTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGACGCCCGCGCGCGCGCCTTCGACGCCCAGTCTGGAGCCCTGCGGAGGGTGTTCCGC
GGCCACGCCTTCATCATCAACTGCATCCAGGTGCACGGCCAGGTGCTCTACACCGCCTCG
CACGACGGCGCGCTGCGCCTCTGGGACGTGCGGGGGCTTCCGCCGCCGCGCCGCGCCGCC
CCCAAGCGCAGCCTCTCGCGCCTCTTCAGCAACAAGGTGGGCTGCGCCGCCGCAGCGCCC
CTGCAGCCGGCCTGAGGCCCCCGGATCCGCCGAGGGAGCGCGGCCCGCCCGCCCGAGGGC
CCCCAGCGGGCGAAGGCGACACATGGGGCCTTGCCTCCGCGTCGGAGGACCTCCGAAGCC
GTCTCCCGTGGGGAGACTGTGCTTGGCCCGGACCGCGTCCCCAACCTGCCCGCCTGTCTG
TCCCCACCCTCTTCAGCCCAGCCCTCAGCCTGCGCTCCGGCCCACCCGGGACCCTCCCAA
TTCTCAGGGTCTCCAGCCCCACGACCTGGGGCGCCTGCTGAGCGAAACGGACGCTTCAAA
ATGCCGCTGAGCCACAAACTGTCGTTATTCTGGCCAATTGTACAACTTGTGCAGAAGCGA
AATACAGGTCCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               88-265, gnl|bosTau2|chr4 (64213743-64213923)
               

               
               88-265, gnl|Hg17|chr7 (150516483-150516268)
               

               
               88-265, gnl|Mm7|chr5 (23753247-23753067)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               88-265, gnl|bosTau2|chr4 (64213743-64213923)
               

               
               88-265, gnl|Hg17|chr7 (150516483-150516268)
               

               
               88-265, gnl|Mm7|chr5 (23753247-23753067)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               nmm (0.132802)

	88-265, gnl\|bosTau2\|chr4 (64213743-64213923)
	88-265, gnl\|Hg17\|chr7 (150516483-150516268)
	88-265, gnl\|Mm7\|chr5 (23753247-23753067)