Non-Coding RNA Search

Ss1.1-OvF8-UMC-p8mm4-005-f12.3

Sequence:


               
               GATTATATTATATAGTTTAAAATGATGGGTATATTTAATTTGGGCATCAAGGGACGGTGA
ACACCTTGGATTATGAGCCTTTAAATATTATGGAGTTATGAATTTTGGAGTAGCAGTGAT
ACTATTCCTCTATTCCACAAAATAGTTATTCCTTTCCGTTCCCATATTTCCCCACTGGTA
TCTGAGGATTGTAAGCAACTGACACAGCCTCTGAAGCTGCCTTTTCTTAATCACAGGAAC
CATTAAAGAGATCCTGGGGACTGCTCAGTCTGTGGGATGCAATGTTGATGGCCGCCACCC
TCATGACATCATAGATGACATCAACAGTGGTGCAGTGGAATGCCCAGCTGTAAGTGACTT
CTGCATTGGTTTCACTTGCTTAAAACCAGGGGAGTTGGAGGGGGAAGCTAAAATTGTCTG
GAGGTAAGGTAGAAAATTGTAGCAATGCTTGATAATGGGGTTGAGTGATACTTATTTTGT
CCTATTACTGAGAGGTTTTCTTTTTCTCTTTCCACAGAGCTAAGAACTGCAAAGAAAAAT
AAAGATTATTTGACAACTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTATATTATATAGTTTAAAATGATGGGTATATTTAATTTGGGCATCAAGGGACGGTGA
ACACCTTGGATTATGAGCCTTTAAATATTATGGAGTTATGAATTTTGGAGTAGCAGTGAT
ACTATTCCTCTATTCCACAAAATAGTTATTCCTTTCCGTTCCCATATTTCCCCACTGGTA
TCTGAGGATTGTAAGCAACTGACACAGCCTCTGAAGCTGCCTTTTCTTAATCACAGGAAC
CATTAAAGAGATCCTGGGGACTGCTCAGTCTGTGGGATGCAATGTTGATGGCCGCCACCC
TCATGACATCATAGATGACATCAACAGTGGTGCAGTGGAATGCCCAGCTGTAAGTGACTT
CTGCATTGGTTTCACTTGCTTAAAACCAGGGGAGTTGGAGGGGGAAGCTAAAATTGTCTG
GAGGTAAGGTAGAAAATTGTAGCAATGCTTGATAATGGGGTTGAGTGATACTTATTTTGT
CCTATTACTGAGAGGTTTTCTTTTTCTCTTTCCACAGAGCTAAGAACTGCAAAGAAAAAT
AAAGATTATTTGACAACTAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               34-539, gnl|bosTau2|chr11 (74551705-74552212)
               

               
               34-539, gnl|Hg17|chr9 (127290021-127289541)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-539, gnl|bosTau2|chr11 (74551705-74552212)
               

               
               34-539, gnl|Hg17|chr9 (127290021-127289541)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               nlu (0.191681)
               

               
               cmu (0.186393)
               

               
               gul (0.177588)
               

               
               csk (0.140746)
               

               
               thg (0.126791)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               cmu (0.186393)
               

               
               gul (0.177588)
               

               
               csk (0.140746)
               

               
               thg (0.126791)

	34-539, gnl\|bosTau2\|chr11 (74551705-74552212)
	34-539, gnl\|Hg17\|chr9 (127290021-127289541)

	nlu (0.191681)
	cmu (0.186393)
	gul (0.177588)
	csk (0.140746)
	thg (0.126791)