Ss1.1-Ova1-OVR010001F07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATGAGTGCAGCTGGGGGACCAACAGCCATCAGGACTTCTGTGATGTGTCAGCTGCCTC TGCAGATTTAACACCTGTCTCCCACCCCTCACGGGCAGCACACCTCTTTGATCCGATCGG CTGGGCCAGCCACGTCCGTACCGGTTCGACTTTGGTGCCACGGGGAAAACCTAGAGTGTG TAGCGGTGTTTCTGGCGCCATGGCGTCGCCCTTCAGCGGGGCCGTGCAGCTGACGGACCT AGCACGTTGGTTGTCAGTGCTGTGAGCCAGAGGATAAGGGTTTCCTGTGGGTCCCATCAC CCTGAGAGCTCCGGCCAAGATCTACATCGAAGATGATGGGAATTACTTCCAAGTCAGTGC GGACGGAGGGACGAGGAAGCTGGAGAAGGCCAAGATCTCACTGGATGACTGCCTGGCGTG CAGCGGCTGTGTCACCTCGGCAGAGACCGTGCTCATCACTCAGCAGAGCCACGAGGAGCT GCGGAAGGTTCTAGACGCCAATAAGACAGCAGCGCCTGGTCAGCAGAGGCTGGTTGTCAT CTCAGTCTCACCCCAGTCCCAAGCGTCACTGGCTGTGAGGTTCCAGCTGAACCCCACAGA CACTGCCAGGAAGCTCACTGCGTTCTTTAAAAGAATAGGGGCACACTACGTGTTCGACAC CGCCTTCTCGAGGAACTTCAGCCTCCTTGAGAGCCAGCGAGAGTTCGTGCGGCGATTCCG AGGACAGGCCGGCTCCCAGCAGGCCCTGCCTGTGCTCACGTCCGCCTGCCCAGGCTGGAT CTGCTACGCCGAGAAGACCCACGGGCGCGCCCTCCTCCCACACATCAGCACCGCCCGGTC CCCACAGCAGGTCATGGGCGCCCTGGTCAAGGACTTCTTTGCGCAGCAGCAGCATCTGAC CCCCGATAAGATCTACCACGTGGCGGTGATGCCCTGTCACGACAAGAAGCTGGAAGCCTC CGGACCCGACTTCTTCAGCCAGGAGCACCAGACACGCGACGTGGATTGTGTCATCACAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATGAGTGCAGCTGGGGGACCAACAGCCATCAGGACTTCTGTGATGTGTCAGCTGCCTC TGCAGATTTAACACCTGTCTCCCACCCCTCACGGGCAGCACACCTCTTTGATCCGATCGG CTGGGCCAGCCACGTCCGTACCGGTTCGACTTTGGTGCCACGGGGAAAACCTAGAGTGTG TAGCGGTGTTTCTGGCGCCATGGCGTCGCCCTTCAGCGGGGCCGTGCAGCTGACGGACCT AGCACGTTGGTTGTCAGTGCTGTGAGCCAGAGGATAAGGGTTTCCTGTGGGTCCCATCAC CCTGAGAGCTCCGGCCAAGATCTACATCGAAGATGATGGGAATTACTTCCAAGTCAGTGC GGACGGAGGGACGAGGAAGCTGGAGAAGGCCAAGATCTCACTGGATGACTGCCTGGCGTG CAGCGGCTGTGTCACCTCGGCAGAGACCGTGCTCATCACTCAGCAGAGCCACGAGGAGCT GCGGAAGGTTCTAGACGCCAATAAGACAGCAGCGCCTGGTCAGCAGAGGCTGGTTGTCAT CTCAGTCTCACCCCAGTCCCAAGCGTCACTGGCTGTGAGGTTCCAGCTGAACCCCACAGA CACTGCCAGGAAGCTCACTGCGTTCTTTAAAAGAATAGGGGCACACTACGTGTTCGACAC CGCCTTCTCGAGGAACTTCAGCCTCCTTGAGAGCCAGCGAGAGTTCGTGCGGCGATTCCG AGGACAGGCCGGCTCCCAGCAGGCCCTGCCTGTGCTCACGTCCGCCTGCCCAGGCTGGAT CTGCTACGCCGAGAAGACCCACGGGCGCGCCCTCCTCCCACACATCAGCACCGCCCGGTC CCCACAGCAGGTCATGGGCGCCCTGGTCAAGGACTTCTTTGCGCAGCAGCAGCATCTGAC CCCCGATAAGATCTACCACGTGGCGGTGATGCCCTGTCACGACAAGAAGCTGGAAGCCTC CGGACCCGACTTCTTCAGCCAGGAGCACCAGACACGCGACGTGGATTGTGTCATCACAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 42-505, gnl|bosTau2|chr25 (1169588-1170053) | |
| 42-505, gnl|Hg17|chr16 (727622-727187) | |
| 637-774, gnl|bosTau2|chr25 (1171146-1171283) | |
| 637-774, gnl|canFam2|chr6 (42891235-42891063) | |
| 637-774, gnl|danRer3|chr3 (9461898-9461738) | |
| 637-774, gnl|dasNov1|scaffold_32310 (12417-12281) | |
| 637-774, gnl|echTel1|scaffold_323419 (39614-39778) | |
| 637-774, gnl|fr1|chrUn (144223729-144223875) | |
| 637-774, gnl|galGal2|chr14 (8068523-8068378) | |
| 637-774, gnl|hg17|chr16 (724719-724897) | |
| 637-774, gnl|Hg17|chr16 (724874-724737) | |
| 637-774, gnl|loxAfr1|scaffold_27620 (5516-5664) | |
| 637-774, gnl|mm7|chr17 (23962344-23962167) | |
| 637-774, gnl|Mm7|chr17 (23962188-23962325) | |
| 637-774, gnl|monDom2|scaffold_49 (9975929-9976083) | |
| 637-774, gnl|oryCun1|scaffold_196544 (6473-6628) | |
| 637-774, gnl|rheMac2|chr20 (728272-728447) | |
| 637-774, gnl|rn3|chr10 (15046715-15046540) | |
| 637-774, gnl|tetNig1|chr3 (9078728-9078870) | |
| 637-774, gnl|xenTro1|scaffold_142 (1745635-1745475) | |
| 890-1020, gnl|bosTau2|chr25 (1171720-1171850) | |
| 890-1020, gnl|Hg17|chr16 (723430-723301) | |
| 890-1020, gnl|Mm7|chr17 (23963544-23963674) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-505, gnl|bosTau2|chr25 (1169588-1170053) | |
| 42-505, gnl|Hg17|chr16 (727622-727187) | |
| 637-774, gnl|bosTau2|chr25 (1171146-1171283) | |
| 637-774, gnl|canFam2|chr6 (42891235-42891063) | |
| 637-774, gnl|danRer3|chr3 (9461898-9461738) | |
| 637-774, gnl|dasNov1|scaffold_32310 (12417-12281) | |
| 637-774, gnl|echTel1|scaffold_323419 (39614-39778) | |
| 637-774, gnl|fr1|chrUn (144223729-144223875) | |
| 637-774, gnl|galGal2|chr14 (8068523-8068378) | |
| 637-774, gnl|hg17|chr16 (724719-724897) | |
| 637-774, gnl|Hg17|chr16 (724874-724737) | |
| 637-774, gnl|loxAfr1|scaffold_27620 (5516-5664) | |
| 637-774, gnl|mm7|chr17 (23962344-23962167) | |
| 637-774, gnl|Mm7|chr17 (23962188-23962325) | |
| 637-774, gnl|monDom2|scaffold_49 (9975929-9976083) | |
| 637-774, gnl|oryCun1|scaffold_196544 (6473-6628) | |
| 637-774, gnl|rheMac2|chr20 (728272-728447) | |
| 637-774, gnl|rn3|chr10 (15046715-15046540) | |
| 637-774, gnl|tetNig1|chr3 (9078728-9078870) | |
| 637-774, gnl|xenTro1|scaffold_142 (1745635-1745475) | |
| 890-1020, gnl|bosTau2|chr25 (1171720-1171850) | |
| 890-1020, gnl|Hg17|chr16 (723430-723301) | |
| 890-1020, gnl|Mm7|chr17 (23963544-23963674) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |