Ss1.1-Ova1-OVR010003B08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGGCCGGTGTGTCTGCGTGTCTGCGGGAACAGTGTGGCTCCAGCATCCTCACTCGCTC GTGGTGGAAGCTGGGAAGGCAGCAGTTTACCAGCTGGGTGTGTCTGCGTGTCTGCGGGAA CAGGTTCCATAAGGTTATTTTCAAGATGCATTCAACCCTGACAGCAAGTGAAATCCGGCA GCGATTTATAGATTTCTTCAAGAGAAATGAACATACCTACGTTCACTCGTCTGCCACCAT CCCATTGGATGATCCCACTTTGCTCTTTGCCAATGCAGGCATGAACCAGTTCAAACCCAT CTTTCTGAATACCATCGACCCATCTCATCCTATGGCAAAGCTGAGCAGAGCTGCCAATAC GCAGAAGTGTATCCGGGCTGGGGGCAAACACAACGACCTGGACGACGTGGGCAAGGATGT CTATCATCACACCTTCTTTGAGATGCTGGGCTCTTGGTCTTTCGGAGATTACTTCAAGGA ATTGGCCTGTAAGATGGCTCTGGAACTTCTCACCCAAGAGTTTGGCATTCCAGTTGAAAG ACTCTATGTCACTTACTTTGGTGGGGATGAAGCAGCTGGCTTAGAACCAGACTTGGAGTG CAAACAGATCTGGCAAAACTTGGGGCTGGATGACAGCAAGATCCTCCCAGGCAACATGAA GGATAACTTCTGGGAGATGGGTGACACGGGCCCGTGTGGTCCCTGCAGTGAAATCCACTA TGACCGGATAGGTGGTCGGGATGCCGCCCACCTCGTCAACCAGGATGACCCCAATGTGCT GGAGATCTGGAACCTCGTGTTCATCCAGTATAACAGAGAAACCGATGGTGTTCTGAAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGGCCGGTGTGTCTGCGTGTCTGCGGGAACAGTGTGGCTCCAGCATCCTCACTCGCTC GTGGTGGAAGCTGGGAAGGCAGCAGTTTACCAGCTGGGTGTGTCTGCGTGTCTGCGGGAA CAGGTTCCATAAGGTTATTTTCAAGATGCATTCAACCCTGACAGCAAGTGAAATCCGGCA GCGATTTATAGATTTCTTCAAGAGAAATGAACATACCTACGTTCACTCGTCTGCCACCAT CCCATTGGATGATCCCACTTTGCTCTTTGCCAATGCAGGCATGAACCAGTTCAAACCCAT CTTTCTGAATACCATCGACCCATCTCATCCTATGGCAAAGCTGAGCAGAGCTGCCAATAC GCAGAAGTGTATCCGGGCTGGGGGCAAACACAACGACCTGGACGACGTGGGCAAGGATGT CTATCATCACACCTTCTTTGAGATGCTGGGCTCTTGGTCTTTCGGAGATTACTTCAAGGA ATTGGCCTGTAAGATGGCTCTGGAACTTCTCACCCAAGAGTTTGGCATTCCAGTTGAAAG ACTCTATGTCACTTACTTTGGTGGGGATGAAGCAGCTGGCTTAGAACCAGACTTGGAGTG CAAACAGATCTGGCAAAACTTGGGGCTGGATGACAGCAAGATCCTCCCAGGCAACATGAA GGATAACTTCTGGGAGATGGGTGACACGGGCCCGTGTGGTCCCTGCAGTGAAATCCACTA TGACCGGATAGGTGGTCGGGATGCCGCCCACCTCGTCAACCAGGATGACCCCAATGTGCT GGAGATCTGGAACCTCGTGTTCATCCAGTATAACAGAGAAACCGATGGTGTTCTGAAACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 288-479, gnl|bosTau2|chr18 (645579-645770) | |
| 288-479, gnl|canFam2|chr5 (79308860-79309077) | |
| 288-479, gnl|danRer3|chr18 (22804368-22804583) | |
| 288-479, gnl|dasNov1|scaffold_90060 (7092-7307) | |
| 288-479, gnl|echTel1|scaffold_287597 (49088-48874) | |
| 288-479, gnl|fr1|chrUn (299258100-299257889) | |
| 288-479, gnl|galGal2|chr11 (1140992-1140775) | |
| 288-479, gnl|hg17|chr16 (68868349-68868566) | |
| 288-479, gnl|Hg17|chr16 (68868560-68868369) | |
| 288-479, gnl|loxAfr1|scaffold_93579 (5263-5477) | |
| 288-479, gnl|mm7|chr8 (109640519-109640304) | |
| 288-479, gnl|Mm7|chr8 (109640306-109640497) | |
| 288-479, gnl|monDom2|scaffold_63 (9785367-9785163) | |
| 288-479, gnl|oryCun1|scaffold_198239 (48114-47896) | |
| 288-479, gnl|panTro1|chr18 (63217047-63217264) | |
| 288-479, gnl|rheMac2|chr20 (72391915-72391699) | |
| 288-479, gnl|rn3|chr19 (40963480-40963262) | |
| 288-479, gnl|tetNig1|chrUn_random (98892455-98892655) | |
| 288-479, gnl|xenTro1|scaffold_387 (91192-90992) | |
| 624-816, gnl|bosTau2|chr18 (646774-646966) | |
| 624-816, gnl|canFam2|chr5 (79306826-79307060) | |
| 624-816, gnl|danRer3|chr18 (22802987-22803219) | |
| 624-816, gnl|echTel1|scaffold_287597 (52157-51923) | |
| 624-816, gnl|fr1|chrUn (299258524-299258325) | |
| 624-816, gnl|galGal2|chr11 (1142819-1142608) | |
| 624-816, gnl|hg17|chr16 (68863178-68863411) | |
| 624-816, gnl|Hg17|chr16 (68863377-68863185) | |
| 624-816, gnl|loxAfr1|scaffold_27562 (13952-14186) | |
| 624-816, gnl|mm7|chr8 (109641853-109641620) | |
| 624-816, gnl|Mm7|chr8 (109641653-109641845) | |
| 624-816, gnl|monDom2|scaffold_63 (9795323-9795112) | |
| 624-816, gnl|oryCun1|scaffold_198239 (51959-51721) | |
| 624-816, gnl|panTro1|chr18 (63211851-63212084) | |
| 624-816, gnl|rheMac2|chr20 (72395003-72394770) | |
| 624-816, gnl|rn3|chr19 (40964822-40964590) | |
| 624-816, gnl|tetNig1|chrUn_random (98891925-98892132) | |
| 624-816, gnl|xenTro1|scaffold_387 (91832-91611) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 288-479, gnl|bosTau2|chr18 (645579-645770) | |
| 288-479, gnl|canFam2|chr5 (79308860-79309077) | |
| 288-479, gnl|danRer3|chr18 (22804368-22804583) | |
| 288-479, gnl|dasNov1|scaffold_90060 (7092-7307) | |
| 288-479, gnl|echTel1|scaffold_287597 (49088-48874) | |
| 288-479, gnl|fr1|chrUn (299258100-299257889) | |
| 288-479, gnl|galGal2|chr11 (1140992-1140775) | |
| 288-479, gnl|hg17|chr16 (68868349-68868566) | |
| 288-479, gnl|Hg17|chr16 (68868560-68868369) | |
| 288-479, gnl|loxAfr1|scaffold_93579 (5263-5477) | |
| 288-479, gnl|mm7|chr8 (109640519-109640304) | |
| 288-479, gnl|Mm7|chr8 (109640306-109640497) | |
| 288-479, gnl|monDom2|scaffold_63 (9785367-9785163) | |
| 288-479, gnl|oryCun1|scaffold_198239 (48114-47896) | |
| 288-479, gnl|panTro1|chr18 (63217047-63217264) | |
| 288-479, gnl|rheMac2|chr20 (72391915-72391699) | |
| 288-479, gnl|rn3|chr19 (40963480-40963262) | |
| 288-479, gnl|tetNig1|chrUn_random (98892455-98892655) | |
| 288-479, gnl|xenTro1|scaffold_387 (91192-90992) | |
| 624-816, gnl|bosTau2|chr18 (646774-646966) | |
| 624-816, gnl|canFam2|chr5 (79306826-79307060) | |
| 624-816, gnl|danRer3|chr18 (22802987-22803219) | |
| 624-816, gnl|echTel1|scaffold_287597 (52157-51923) | |
| 624-816, gnl|fr1|chrUn (299258524-299258325) | |
| 624-816, gnl|galGal2|chr11 (1142819-1142608) | |
| 624-816, gnl|hg17|chr16 (68863178-68863411) | |
| 624-816, gnl|Hg17|chr16 (68863377-68863185) | |
| 624-816, gnl|loxAfr1|scaffold_27562 (13952-14186) | |
| 624-816, gnl|mm7|chr8 (109641853-109641620) | |
| 624-816, gnl|Mm7|chr8 (109641653-109641845) | |
| 624-816, gnl|monDom2|scaffold_63 (9795323-9795112) | |
| 624-816, gnl|oryCun1|scaffold_198239 (51959-51721) | |
| 624-816, gnl|panTro1|chr18 (63211851-63212084) | |
| 624-816, gnl|rheMac2|chr20 (72395003-72394770) | |
| 624-816, gnl|rn3|chr19 (40964822-40964590) | |
| 624-816, gnl|tetNig1|chrUn_random (98891925-98892132) | |
| 624-816, gnl|xenTro1|scaffold_387 (91832-91611) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) | |
| clu (0.119646) |