Ss1.1-Ova1-OVR010004A12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTCTTCCTGGTTGGGCCCTGTCCTGAGCTGCCGCCCGGGAAGCCGGCTGCAGGGACCGC AGCGACACCCCCCCCAAACACTCCTCCCCCAGGATGGCCGAGGAGGTCATCACTCCGGTG TACTGCACTGGGGTGTCTGCACAAGTGCAGAAGCTGCGGGCCAAGGAGCTGGGCCTGGGC CGCCATGAAAATGCCATCAAGTACCTGGGCCAGGATTACGAGCAGCTCCGGGCTCACTGC CTGCAGAGTGGGAGCCTCTTCCGTGATGAGGCTTTCCCTCCAGTGCCGCAGAGCCTGGGC TTCAAGGAACTGGGCCCCAACTCCTCCAAAACCTATGGCGTCAAGTGGAAGCGTCCCACG GAGCTGTTCTCAAACCCCCAGTTCATCGTGGATGGAGCCACCCGCACAGACATCTGCCAG GGAGCACTGGGGGACTGCTGGCTCCTGGCTGCCATCGCCTCCCTTACCCTCAACGACACC CTCCTGCACCGAGTAGTTCCACACGGCCAAAGCTTCCAGAATGGCTATGCTGGCATCTTC CATTTCCAGCTGTGGCAGTTTGGGGAGTGGGTGGACGTGGTGGTGGATGACCTGCTGCCC ACCAAAGACGGGAAGCTGGTGTTCGTGCACTCTGCCCAAGGCAACGAGTTCTGGAGCGCC CTGCTCGAGAAGGCTTATGCCAAGGTGAATGGCAGCTACGAGGCCCTGTCCGGGGGCAGC ACCTCCGAGGGCTTTGAGGACTTCACGGGCGGGGTCACCGAGTGGTACGAGCTGCGGAAG GCACCCAGCGACCTCTACAGCATCATCCTCAAGGCGCTGGAGCGAGGCTCCCTGCTGGGC TGCTCCATTGACGTGAGTGCGCCCCGTCATGGGACCCGCGTCTCCTCTTGGGGTGCTGCC CTCTCCTATATGAGCCCCACCTCACCCCCGCCCAGGCTTGGCTCCAGACTCCGTCCTTCA GCTGGCACCAGTCCCGGATCCTCTCCCAGTCCCATCCCCTCACCCCCATCCCCAGGACCT CAGACCTCAGTTGGTTTTCCCAACCTCAGCTCCTCGTTCTGGTCGTCGGAAGCCATGACA TCAGACCTCAAGTCGTCACAGCCTCAGACCTCAGCTCTGCCCTCCCAGCTCCCCTGGCTG CTGATGGGCTCTTCCCGGACTCACTCCCTTCACTCCCTCAGTCGCTCTTCTCAGCTCCTC CTCAGGCCTCCCTCACCCTTGATCTCAGGCTCCATCCCCACCCCCACGGCATCCTCCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTCTTCCTGGTTGGGCCCTGTCCTGAGCTGCCGCCCGGGAAGCCGGCTGCAGGGACCGC AGCGACACCCCCCCCAAACACTCCTCCCCCAGGATGGCCGAGGAGGTCATCACTCCGGTG TACTGCACTGGGGTGTCTGCACAAGTGCAGAAGCTGCGGGCCAAGGAGCTGGGCCTGGGC CGCCATGAAAATGCCATCAAGTACCTGGGCCAGGATTACGAGCAGCTCCGGGCTCACTGC CTGCAGAGTGGGAGCCTCTTCCGTGATGAGGCTTTCCCTCCAGTGCCGCAGAGCCTGGGC TTCAAGGAACTGGGCCCCAACTCCTCCAAAACCTATGGCGTCAAGTGGAAGCGTCCCACG GAGCTGTTCTCAAACCCCCAGTTCATCGTGGATGGAGCCACCCGCACAGACATCTGCCAG GGAGCACTGGGGGACTGCTGGCTCCTGGCTGCCATCGCCTCCCTTACCCTCAACGACACC CTCCTGCACCGAGTAGTTCCACACGGCCAAAGCTTCCAGAATGGCTATGCTGGCATCTTC CATTTCCAGCTGTGGCAGTTTGGGGAGTGGGTGGACGTGGTGGTGGATGACCTGCTGCCC ACCAAAGACGGGAAGCTGGTGTTCGTGCACTCTGCCCAAGGCAACGAGTTCTGGAGCGCC CTGCTCGAGAAGGCTTATGCCAAGGTGAATGGCAGCTACGAGGCCCTGTCCGGGGGCAGC ACCTCCGAGGGCTTTGAGGACTTCACGGGCGGGGTCACCGAGTGGTACGAGCTGCGGAAG GCACCCAGCGACCTCTACAGCATCATCCTCAAGGCGCTGGAGCGAGGCTCCCTGCTGGGC TGCTCCATTGACGTGAGTGCGCCCCGTCATGGGACCCGCGTCTCCTCTTGGGGTGCTGCC CTCTCCTATATGAGCCCCACCTCACCCCCGCCCAGGCTTGGCTCCAGACTCCGTCCTTCA GCTGGCACCAGTCCCGGATCCTCTCCCAGTCCCATCCCCTCACCCCCATCCCCAGGACCT CAGACCTCAGTTGGTTTTCCCAACCTCAGCTCCTCGTTCTGGTCGTCGGAAGCCATGACA TCAGACCTCAAGTCGTCACAGCCTCAGACCTCAGCTCTGCCCTCCCAGCTCCCCTGGCTG CTGATGGGCTCTTCCCGGACTCACTCCCTTCACTCCCTCAGTCGCTCTTCTCAGCTCCTC CTCAGGCCTCCCTCACCCTTGATCTCAGGCTCCATCCCCACCCCCACGGCATCCTCCCTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 171-361, gnl|bosTau2|chr16 (13899919-13900109) | |
| 171-361, gnl|Hg17|chr1 (220207125-220207315) | |
| 171-361, gnl|Mm7|chr1 (182502102-182501912) | |
| 520-684, gnl|bosTau2|chr15 (35554953-35555117) | |
| 520-684, gnl|canFam2|chr21 (24644280-24644121) | |
| 520-684, gnl|danRer3|chr21 (14796611-14796763) | |
| 520-684, gnl|dasNov1|scaffold_206650 (4277-4118) | |
| 520-684, gnl|fr1|chrUn (102817541-102817693) | |
| 520-684, gnl|galGal2|chr1_random (213945-213786) | |
| 520-684, gnl|hg17|chr11 (76501275-76501434) | |
| 520-684, gnl|Hg17|chr11 (76501328-76501492) | |
| 520-684, gnl|loxAfr1|scaffold_32479 (11017-10860) | |
| 520-684, gnl|mm7|chr7 (94167880-94167721) | |
| 520-684, gnl|Mm7|chr7 (94167825-94167661) | |
| 520-684, gnl|monDom2|scaffold_46 (13339406-13339249) | |
| 520-684, gnl|oryCun1|scaffold_199253 (150252-150411) | |
| 520-684, gnl|panTro1|chr9 (77797116-77797275) | |
| 520-684, gnl|rheMac2|chr14 (75292561-75292720) | |
| 520-684, gnl|rn3|chr1 (155458075-155457916) | |
| 520-684, gnl|tetNig1|chrUn_random (29627015-29627167) | |
| 520-684, gnl|xenTro1|scaffold_694 (650125-650284) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 171-361, gnl|bosTau2|chr16 (13899919-13900109) | |
| 171-361, gnl|Hg17|chr1 (220207125-220207315) | |
| 171-361, gnl|Mm7|chr1 (182502102-182501912) | |
| 520-684, gnl|bosTau2|chr15 (35554953-35555117) | |
| 520-684, gnl|canFam2|chr21 (24644280-24644121) | |
| 520-684, gnl|danRer3|chr21 (14796611-14796763) | |
| 520-684, gnl|dasNov1|scaffold_206650 (4277-4118) | |
| 520-684, gnl|fr1|chrUn (102817541-102817693) | |
| 520-684, gnl|galGal2|chr1_random (213945-213786) | |
| 520-684, gnl|hg17|chr11 (76501275-76501434) | |
| 520-684, gnl|Hg17|chr11 (76501328-76501492) | |
| 520-684, gnl|loxAfr1|scaffold_32479 (11017-10860) | |
| 520-684, gnl|mm7|chr7 (94167880-94167721) | |
| 520-684, gnl|Mm7|chr7 (94167825-94167661) | |
| 520-684, gnl|monDom2|scaffold_46 (13339406-13339249) | |
| 520-684, gnl|oryCun1|scaffold_199253 (150252-150411) | |
| 520-684, gnl|panTro1|chr9 (77797116-77797275) | |
| 520-684, gnl|rheMac2|chr14 (75292561-75292720) | |
| 520-684, gnl|rn3|chr1 (155458075-155457916) | |
| 520-684, gnl|tetNig1|chrUn_random (29627015-29627167) | |
| 520-684, gnl|xenTro1|scaffold_694 (650125-650284) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |