Ss1.1-Ova1-OVR010006B10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATGGCGGCCCATCACCGGCAGAACACGGCAGGGCGGAGGAAAGTGCAGGTTTCCTAT GTTATTCGAGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAATGCCCTACAGCTGGAC CCAGCACTAAACAGACTTTTCACGGCTGGTCGAGACTCCATTATAAGAATATGGAGTGTC AATCAGCACAAGCAAGATCCATATATAGCATCTATGGAACACCATACTGATTGGGTAAAT GACATCGTACTCTGTTGTAATGGAAAAACATTAATATCTGCTTCTTCTGACACAACAGTA AAAGTATGGAATGCACATAAAGGATTCTGCATGTCAACATTAAGGACACATAAGGATTAC GTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTGGTAGCATCGGCTGGGTTGGACAGA CAAATATTCCTTTGGGATGTGAATACTCTAACAGCGTTGACTGCCTCAAATAACACTGTC ACAACTTCTTCTTTAAGTGGGAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTG GGAACAATCATTGTATCAGGGTCCACTGAGAAGGTTTTAAGAGTATGGGATCCAAGAACA TGTGCAAAACTAATGAAGCTTAAAGGGCACACAGATAATGTTAAAGCATTGCTGTTGAAC AGAGATGGCACACAGTGCCTTTCCGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTT GGCCAGCAGAGATGTATAGCAACATACCGAGTGCATGATGAAGGCGTTTGGGCTCTGCAG GTCAATGATGCCTTCACACACGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATGGCGGCCCATCACCGGCAGAACACGGCAGGGCGGAGGAAAGTGCAGGTTTCCTAT GTTATTCGAGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAATGCCCTACAGCTGGAC CCAGCACTAAACAGACTTTTCACGGCTGGTCGAGACTCCATTATAAGAATATGGAGTGTC AATCAGCACAAGCAAGATCCATATATAGCATCTATGGAACACCATACTGATTGGGTAAAT GACATCGTACTCTGTTGTAATGGAAAAACATTAATATCTGCTTCTTCTGACACAACAGTA AAAGTATGGAATGCACATAAAGGATTCTGCATGTCAACATTAAGGACACATAAGGATTAC GTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTGGTAGCATCGGCTGGGTTGGACAGA CAAATATTCCTTTGGGATGTGAATACTCTAACAGCGTTGACTGCCTCAAATAACACTGTC ACAACTTCTTCTTTAAGTGGGAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTG GGAACAATCATTGTATCAGGGTCCACTGAGAAGGTTTTAAGAGTATGGGATCCAAGAACA TGTGCAAAACTAATGAAGCTTAAAGGGCACACAGATAATGTTAAAGCATTGCTGTTGAAC AGAGATGGCACACAGTGCCTTTCCGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTT GGCCAGCAGAGATGTATAGCAACATACCGAGTGCATGATGAAGGCGTTTGGGCTCTGCAG GTCAATGATGCCTTCACACACGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 353-484, gnl|bosTau2|chr22 (11325114-11324983) | |
| 353-484, gnl|canFam2|chr23 (11745879-11746034) | |
| 353-484, gnl|danRer3|chr2 (44314001-44314157) | |
| 353-484, gnl|dasNov1|scaffold_66275 (2169-2012) | |
| 353-484, gnl|echTel1|scaffold_309630 (127880-127729) | |
| 353-484, gnl|fr1|chrUn (68198129-68198272) | |
| 353-484, gnl|galGal2|chr2 (4764326-4764190) | |
| 353-484, gnl|hg17|chr3 (39083240-39083396) | |
| 353-484, gnl|Hg17|chr3 (39083239-39083370) | |
| 353-484, gnl|loxAfr1|scaffold_14393 (5964-5808) | |
| 353-484, gnl|mm7|chr9 (119601262-119601415) | |
| 353-484, gnl|Mm7|chr9 (119601261-119601392) | |
| 353-484, gnl|monDom2|scaffold_128 (2687079-2687235) | |
| 353-484, gnl|oryCun1|scaffold_195389 (72024-71873) | |
| 353-484, gnl|panTro1|chr2 (40191465-40191621) | |
| 353-484, gnl|rheMac2|chr2 (97454515-97454359) | |
| 353-484, gnl|rn3|chr8 (124881725-124881878) | |
| 353-484, gnl|tetNig1|chr15 (2314942-2314809) | |
| 353-484, gnl|xenTro1|scaffold_647 (607130-606979) | |
| 673-804, gnl|bosTau2|chr22 (11316354-11316223) | |
| 673-804, gnl|canFam2|chr23 (11753411-11753655) | |
| 673-804, gnl|danRer3|chr24 (32935938-32935691) | |
| 673-804, gnl|dasNov1|scaffold_145553 (1930-1701) | |
| 673-804, gnl|echTel1|scaffold_309630 (118502-118258) | |
| 673-804, gnl|fr1|chrUn (68198704-68198949) | |
| 673-804, gnl|galGal2|chr2 (4760697-4760453) | |
| 673-804, gnl|hg17|chr3 (39091207-39091451) | |
| 673-804, gnl|Hg17|chr3 (39091218-39091349) | |
| 673-804, gnl|mm7|chr9 (119605232-119605476) | |
| 673-804, gnl|Mm7|chr9 (119605243-119605374) | |
| 673-804, gnl|monDom2|scaffold_128 (2692142-2692386) | |
| 673-804, gnl|oryCun1|scaffold_195389 (65832-65592) | |
| 673-804, gnl|panTro1|chr2 (40202339-40202583) | |
| 673-804, gnl|rheMac2|chr2 (97445379-97445135) | |
| 673-804, gnl|rn3|chr8 (124886463-124886706) | |
| 673-804, gnl|tetNig1|chr15 (2314380-2314143) | |
| 673-804, gnl|xenTro1|scaffold_647 (605956-605714) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 353-484, gnl|bosTau2|chr22 (11325114-11324983) | |
| 353-484, gnl|canFam2|chr23 (11745879-11746034) | |
| 353-484, gnl|danRer3|chr2 (44314001-44314157) | |
| 353-484, gnl|dasNov1|scaffold_66275 (2169-2012) | |
| 353-484, gnl|echTel1|scaffold_309630 (127880-127729) | |
| 353-484, gnl|fr1|chrUn (68198129-68198272) | |
| 353-484, gnl|galGal2|chr2 (4764326-4764190) | |
| 353-484, gnl|hg17|chr3 (39083240-39083396) | |
| 353-484, gnl|Hg17|chr3 (39083239-39083370) | |
| 353-484, gnl|loxAfr1|scaffold_14393 (5964-5808) | |
| 353-484, gnl|mm7|chr9 (119601262-119601415) | |
| 353-484, gnl|Mm7|chr9 (119601261-119601392) | |
| 353-484, gnl|monDom2|scaffold_128 (2687079-2687235) | |
| 353-484, gnl|oryCun1|scaffold_195389 (72024-71873) | |
| 353-484, gnl|panTro1|chr2 (40191465-40191621) | |
| 353-484, gnl|rheMac2|chr2 (97454515-97454359) | |
| 353-484, gnl|rn3|chr8 (124881725-124881878) | |
| 353-484, gnl|tetNig1|chr15 (2314942-2314809) | |
| 353-484, gnl|xenTro1|scaffold_647 (607130-606979) | |
| 673-804, gnl|bosTau2|chr22 (11316354-11316223) | |
| 673-804, gnl|canFam2|chr23 (11753411-11753655) | |
| 673-804, gnl|danRer3|chr24 (32935938-32935691) | |
| 673-804, gnl|dasNov1|scaffold_145553 (1930-1701) | |
| 673-804, gnl|echTel1|scaffold_309630 (118502-118258) | |
| 673-804, gnl|fr1|chrUn (68198704-68198949) | |
| 673-804, gnl|galGal2|chr2 (4760697-4760453) | |
| 673-804, gnl|hg17|chr3 (39091207-39091451) | |
| 673-804, gnl|Hg17|chr3 (39091218-39091349) | |
| 673-804, gnl|mm7|chr9 (119605232-119605476) | |
| 673-804, gnl|Mm7|chr9 (119605243-119605374) | |
| 673-804, gnl|monDom2|scaffold_128 (2692142-2692386) | |
| 673-804, gnl|oryCun1|scaffold_195389 (65832-65592) | |
| 673-804, gnl|panTro1|chr2 (40202339-40202583) | |
| 673-804, gnl|rheMac2|chr2 (97445379-97445135) | |
| 673-804, gnl|rn3|chr8 (124886463-124886706) | |
| 673-804, gnl|tetNig1|chr15 (2314380-2314143) | |
| 673-804, gnl|xenTro1|scaffold_647 (605956-605714) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |