Ss1.1-Ova1-OVR010007F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGAGACATGGCGGGAGACCATGGGGATCCCCAGTATGATCCTCCTGGGGCACAGCCTGG GAGGATTCCTGGCCACCTCCTACTCAATCAAGTACCCTGACAGAGTTAAACACCTCATTC TGGTGGACCCGTGGGGCTTTCCCCTCCGACCAACTGACCCCAGCGAGATCCGTGCACCCC CAACTTGGGTCAAGGCTGTGGCCTCTGTCCTAGGGCGTTCCAATCCACTGGCTGTTCTTC GAGTAGCTGGGCCCTGGGGGCCCGGCCTGGTCCAGCGATTCCGACCGGACTTCAAGCGCA AGTTTGCAGACTTCTTTGAAGATGATACTATATCGGAGTATATCTACCACTGCAATGCAC AGAATCCCAGTGGGGAGACAGCATTCAAAGCCATGATGGAGTCCTTCGGCTGGGCCCGGC GCCCCATGTTAGAGCGAATTCACTTGATTCGAAAAGATGTGCCCATCACCATGATCTATG GGGCCAACACCTGGATAGACACTAGCACGGGAAAAAAGGTGAAGCTGCAGCGGCCAGATT CCTATGTCCGAGACCTGGAGATCGAGGGTGCCTCGCACCATGTGTACGCAGACCAGCCTC ACATCTTCAACGCGGTGGTGGAGGAGATCTGCGACTCGGTTGATTGAGCTGCTCTCCCTA CAGGCCGAGGAGAAAGCCAGCGAGTCGCTCTCCCCTCCCTGTCTCCTTACTCACCCCTCT GTCCTTTCCTCACCCACTAACACGTGCCAGCCAGGCAGAGTCTTGGGCTGTCCCCAGGGC AGGGCCACAGAAGAAAAGCACTCCTGACCCCAGGCACAGGGCTGGAGGCAAAAGCCACAA GAGGCCTTGAGCTCCCCACTCTGGGAAGAACATAAAGGGTTGCAGAGTGCCACCCCATTC TCTCCAAGCCAAGTGTTACCCAGGTGGTGGTCATGAAGGGATCATCCCAAGCCACTGCCC CCGCTTCCTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGAGACATGGCGGGAGACCATGGGGATCCCCAGTATGATCCTCCTGGGGCACAGCCTGG GAGGATTCCTGGCCACCTCCTACTCAATCAAGTACCCTGACAGAGTTAAACACCTCATTC TGGTGGACCCGTGGGGCTTTCCCCTCCGACCAACTGACCCCAGCGAGATCCGTGCACCCC CAACTTGGGTCAAGGCTGTGGCCTCTGTCCTAGGGCGTTCCAATCCACTGGCTGTTCTTC GAGTAGCTGGGCCCTGGGGGCCCGGCCTGGTCCAGCGATTCCGACCGGACTTCAAGCGCA AGTTTGCAGACTTCTTTGAAGATGATACTATATCGGAGTATATCTACCACTGCAATGCAC AGAATCCCAGTGGGGAGACAGCATTCAAAGCCATGATGGAGTCCTTCGGCTGGGCCCGGC GCCCCATGTTAGAGCGAATTCACTTGATTCGAAAAGATGTGCCCATCACCATGATCTATG GGGCCAACACCTGGATAGACACTAGCACGGGAAAAAAGGTGAAGCTGCAGCGGCCAGATT CCTATGTCCGAGACCTGGAGATCGAGGGTGCCTCGCACCATGTGTACGCAGACCAGCCTC ACATCTTCAACGCGGTGGTGGAGGAGATCTGCGACTCGGTTGATTGAGCTGCTCTCCCTA CAGGCCGAGGAGAAAGCCAGCGAGTCGCTCTCCCCTCCCTGTCTCCTTACTCACCCCTCT GTCCTTTCCTCACCCACTAACACGTGCCAGCCAGGCAGAGTCTTGGGCTGTCCCCAGGGC AGGGCCACAGAAGAAAAGCACTCCTGACCCCAGGCACAGGGCTGGAGGCAAAAGCCACAA GAGGCCTTGAGCTCCCCACTCTGGGAAGAACATAAAGGGTTGCAGAGTGCCACCCCATTC TCTCCAAGCCAAGTGTTACCCAGGTGGTGGTCATGAAGGGATCATCCCAAGCCACTGCCC CCGCTTCCTCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 102-259, gnl|bosTau2|chr10 (14405767-14405610) | |
| 102-259, gnl|canFam2|chr8 (6006843-6007008) | |
| 102-259, gnl|danRer3|chr9 (19954365-19954167) | |
| 102-259, gnl|dasNov1|scaffold_523 (174846-175014) | |
| 102-259, gnl|echTel1|scaffold_312379 (68999-68836) | |
| 102-259, gnl|fr1|chrUn (36536873-36537065) | |
| 102-259, gnl|galGal2|chr2 (39965846-39965683) | |
| 102-259, gnl|hg17|chr14 (22142665-22142833) | |
| 102-259, gnl|Hg17|chr14 (22142668-22142825) | |
| 102-259, gnl|loxAfr1|scaffold_2813 (30614-30446) | |
| 102-259, gnl|mm7|chr14 (49133189-49133357) | |
| 102-259, gnl|Mm7|chr14 (49133192-49133349) | |
| 102-259, gnl|monDom2|scaffold_12 (27406140-27405974) | |
| 102-259, gnl|oryCun1|scaffold_177867 (74146-74314) | |
| 102-259, gnl|panTro1|chr15 (21084125-21084293) | |
| 102-259, gnl|rheMac2|chr7 (85409919-85410087) | |
| 102-259, gnl|rn3|chr15 (32334457-32334625) | |
| 102-259, gnl|tetNig1|chr21 (4347460-4347619) | |
| 102-259, gnl|xenTro1|scaffold_850 (49908-49745) | |
| 557-962, gnl|bosTau2|chr10 (14400289-14399885) | |
| 557-962, gnl|Hg17|chr14 (22149604-22150018) | |
| 557-962, gnl|Mm7|chr14 (49137794-49138189) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-259, gnl|bosTau2|chr10 (14405767-14405610) | |
| 102-259, gnl|canFam2|chr8 (6006843-6007008) | |
| 102-259, gnl|danRer3|chr9 (19954365-19954167) | |
| 102-259, gnl|dasNov1|scaffold_523 (174846-175014) | |
| 102-259, gnl|echTel1|scaffold_312379 (68999-68836) | |
| 102-259, gnl|fr1|chrUn (36536873-36537065) | |
| 102-259, gnl|galGal2|chr2 (39965846-39965683) | |
| 102-259, gnl|hg17|chr14 (22142665-22142833) | |
| 102-259, gnl|Hg17|chr14 (22142668-22142825) | |
| 102-259, gnl|loxAfr1|scaffold_2813 (30614-30446) | |
| 102-259, gnl|mm7|chr14 (49133189-49133357) | |
| 102-259, gnl|Mm7|chr14 (49133192-49133349) | |
| 102-259, gnl|monDom2|scaffold_12 (27406140-27405974) | |
| 102-259, gnl|oryCun1|scaffold_177867 (74146-74314) | |
| 102-259, gnl|panTro1|chr15 (21084125-21084293) | |
| 102-259, gnl|rheMac2|chr7 (85409919-85410087) | |
| 102-259, gnl|rn3|chr15 (32334457-32334625) | |
| 102-259, gnl|tetNig1|chr21 (4347460-4347619) | |
| 102-259, gnl|xenTro1|scaffold_850 (49908-49745) | |
| 557-962, gnl|bosTau2|chr10 (14400289-14399885) | |
| 557-962, gnl|Hg17|chr14 (22149604-22150018) | |
| 557-962, gnl|Mm7|chr14 (49137794-49138189) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| mas (0.210305) |