Non-Coding RNA Search

Ss1.1-Ova1-OVR010008A03.5

Sequence:


               
               CAGTCTGCCTGCTTTCGTTCGTTTTCCTGTACCTTTGCTGAGGCCTAGAGCGACCCGGGA
GGAAGCTAGGCCGGGTCTGCTACTCTAGTCACCGTTTGCGCACAAAGGCGCCAACCCCGG
ATCCGGGGCGAGGAGGGCCGCCACCGCTCCGGAGCAGCGCGGAGACGTACGGTGCGCCCT
ATGCTCCCGCGCCCCTACCGCCCACGCCGCGGCTTCCTGAGCACAGCGAGAGAACGCGCC
ACCCCGGGGCCTGGGTGCAGCTAGCGACCCTTGCCCCTAGCGCGCAGCCCGAGGTGAGCA
GTGAGCGGCCAGCGGGACGGCAGCGAGGCGTTCGCGGGCCCCCTCTTGCTGCCCGGGCCC
GGCCCGCTCATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGC
AAGACGTGCCTGCTGATCGTGTTCAGTAAGGACGAGTTCCCTGAGGTGTACGTGCCCACA
GTCTTTGAGAACTATGTGGCCGACATCGAAGTGGACGGCAAGCAGGTGGAGCTGGCGCTG
TGGGACACAGCGGGCCAGGAGGACTACGATCGCCTGCGGCCGCTCTCCTACCCGGACACC
GACGTGATCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGTCTGCCTGCTTTCGTTCGTTTTCCTGTACCTTTGCTGAGGCCTAGAGCGACCCGGGA
GGAAGCTAGGCCGGGTCTGCTACTCTAGTCACCGTTTGCGCACAAAGGCGCCAACCCCGG
ATCCGGGGCGAGGAGGGCCGCCACCGCTCCGGAGCAGCGCGGAGACGTACGGTGCGCCCT
ATGCTCCCGCGCCCCTACCGCCCACGCCGCGGCTTCCTGAGCACAGCGAGAGAACGCGCC
ACCCCGGGGCCTGGGTGCAGCTAGCGACCCTTGCCCCTAGCGCGCAGCCCGAGGTGAGCA
GTGAGCGGCCAGCGGGACGGCAGCGAGGCGTTCGCGGGCCCCCTCTTGCTGCCCGGGCCC
GGCCCGCTCATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGC
AAGACGTGCCTGCTGATCGTGTTCAGTAAGGACGAGTTCCCTGAGGTGTACGTGCCCACA
GTCTTTGAGAACTATGTGGCCGACATCGAAGTGGACGGCAAGCAGGTGGAGCTGGCGCTG
TGGGACACAGCGGGCCAGGAGGACTACGATCGCCTGCGGCCGCTCTCCTACCCGGACACC
GACGTGATCCTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JR06_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JR06_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-611, gnl|bosTau2|chr11 (61537725-61538339)
               

               
               1-611, gnl|Hg17|chr2 (20568474-20569096)
               

               
               1-611, gnl|Mm7|chr12 (8526031-8525424)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-611, gnl|bosTau2|chr11 (61537725-61538339)
               

               
               1-611, gnl|Hg17|chr2 (20568474-20569096)
               

               
               1-611, gnl|Mm7|chr12 (8526031-8525424)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (9.49071)
               

               
               eep (0.245128)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (9.49071)
               

               
               eep (0.245128)

	1-611, gnl\|bosTau2\|chr11 (61537725-61538339)
	1-611, gnl\|Hg17\|chr2 (20568474-20569096)
	1-611, gnl\|Mm7\|chr12 (8526031-8525424)