Non-Coding RNA Search

Ss1.1-Ova1-OVR010011B04.5

Sequence:


               
               AGATAATCTATCTATATAATAGAAATTTCTTCTTTCAAGTAACCCTAAAGGTGGTACCAG
AGTACTTGTAAAAATATTGAGAAAATCACTTATAAAAGGTTATTTGTATTGTTTTCAAGA
CATCACACAGCATGAACTGATCAAGAAAAGCCACAACCTGTTTACACTGATGAAGCTTCT
AGGATCAGGTGAACTGTGTCGTGAAAACCAGTGAGGAAGAAGACAAAGAGGAATAAACAA
CCTGTCTTTTAATAAAGACATTTTAAAAGTCAAGAAAAAAGTTTATTTATACCATTGTAA
ATAAAGAGTGCCCTCATTCCTCTAAATACTCGACTGATCTTCAGTAGTAAAGTCCAGTGT
GTTTCTGATTATTTTACCAGCCTAGCTCTGACTCCTGTGACCCTGTACTCCCTTATCTTT
TGCAGTTCATCATCAATAGGCTTGAGTACCTTGGATAGCCCTCTGCAGTCTCTTCTTTAA
CTGTTAGTACTTGGATTCCCAGCTTAGATTAATGGGCACTAAATACATTAGCTGACATAC
AAACCAAAGTATGTGCAAACTCTGGGAGTGAAATATTCTCCTGTCTGGAATCCTGTGTCT
TAGAACATATTTCAGTATAAGAGCACTTAGTCTATGTAGTCGGCCAAGGACAGAGTTATC
TAGAAATTGTAAAGAACTTCCACAGCATATTTTGAAAGTAAGTATTTTATTTTTGTAACT
AGGTTCCTGTCACATCTAAGTTGATCTTAAGAATTTGTAGATCTATGGAGATCCCGTCGT
GGCGCAGTGGTTAACGAGTCCGACTAGGAACCATGAGGTTGCGGGTTCCGTCCCGCCCTT
GCTCAGTGGGTTAACAATCTGGCGTTGCCATGAGCTGTGCTGTAGGTTGCAGACGCGGCT
CGGATCCTGCATGGCTGTGGCTGTGGCTGTGGCCGGCAGCTGCAGCTCCGATTCGACCCC
TAGCCTGGGAACCTCCATATGCCGTGGGAGCGGCCCCAAAAGTAGAAAAAAGACAAAAAA
AAAAAAATTGTAGATCTGGTGGGTCTGAAAAGTTTTTAGGCTTTAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATAATCTATCTATATAATAGAAATTTCTTCTTTCAAGTAACCCTAAAGGTGGTACCAG
AGTACTTGTAAAAATATTGAGAAAATCACTTATAAAAGGTTATTTGTATTGTTTTCAAGA
CATCACACAGCATGAACTGATCAAGAAAAGCCACAACCTGTTTACACTGATGAAGCTTCT
AGGATCAGGTGAACTGTGTCGTGAAAACCAGTGAGGAAGAAGACAAAGAGGAATAAACAA
CCTGTCTTTTAATAAAGACATTTTAAAAGTCAAGAAAAAAGTTTATTTATACCATTGTAA
ATAAAGAGTGCCCTCATTCCTCTAAATACTCGACTGATCTTCAGTAGTAAAGTCCAGTGT
GTTTCTGATTATTTTACCAGCCTAGCTCTGACTCCTGTGACCCTGTACTCCCTTATCTTT
TGCAGTTCATCATCAATAGGCTTGAGTACCTTGGATAGCCCTCTGCAGTCTCTTCTTTAA
CTGTTAGTACTTGGATTCCCAGCTTAGATTAATGGGCACTAAATACATTAGCTGACATAC
AAACCAAAGTATGTGCAAACTCTGGGAGTGAAATATTCTCCTGTCTGGAATCCTGTGTCT
TAGAACATATTTCAGTATAAGAGCACTTAGTCTATGTAGTCGGCCAAGGACAGAGTTATC
TAGAAATTGTAAAGAACTTCCACAGCATATTTTGAAAGTAAGTATTTTATTTTTGTAACT
AGGTTCCTGTCACATCTAAGTTGATCTTAAGAATTTGTAGATCTATGGAGATCCCGTCGT
GGCGCAGTGGTTAACGAGTCCGACTAGGAACCATGAGGTTGCGGGTTCCGTCCCGCCCTT
GCTCAGTGGGTTAACAATCTGGCGTTGCCATGAGCTGTGCTGTAGGTTGCAGACGCGGCT
CGGATCCTGCATGGCTGTGGCTGTGGCTGTGGCCGGCAGCTGCAGCTCCGATTCGACCCC
TAGCCTGGGAACCTCCATATGCCGTGGGAGCGGCCCCAAAAGTAGAAAAAAGACAAAAAA
AAAAAAATTGTAGATCTGGTGGGTCTGAAAAGTTTTTAGGCTTTAGTA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               323-751, gnl|bosTau2|chr2 (41613453-41613888)
               

               
               323-751, gnl|Hg17|chr2 (114434430-114434845)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               323-751, gnl|bosTau2|chr2 (41613453-41613888)
               

               
               323-751, gnl|Hg17|chr2 (114434430-114434845)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	323-751, gnl\|bosTau2\|chr2 (41613453-41613888)
	323-751, gnl\|Hg17\|chr2 (114434430-114434845)