Ss1.1-Ova1-OVR010012B11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTTGAGCTGTGGGCTGTCTGCCTGGGGGCGGCGGAGGTACCTCGGGGGGTCCCAATCGG TTCCCGGTGGTCAGAGGAGGAGGAGGAGGATTGCATCCCTCACTCCAGCTGAGAGGAGGG AAAATGACTGCTGGTTCAGTGTGTGTTCCTCAAATCATACCACTGAGGGTGCCTCAGCCC GGAAAAGCCAACCATGAAATTGATAACAATACACTTTTGGAAATGAAATCAGACACCCCA GATGTCAACATCTATTATACCCTGGATGGCAGCAAACCTGAATTCCTAAAGAAAATTGGT TATGGCGAAAATAATACATTTAAGTACACGAAGCCTATTACCCTGCCTGATGGAAAAATA CAAGTTAAAGCTATTGCAGTCTCTAAAGACTGCAGACAGAGCGCCGTTGTAACAAAGGTG TTTCAGGTGGACTTTGTGCCACCAGATGCAGCCTCTTCAGAAGACACTGTGGAAAATGCT CTCAAAGATTCTTCAAAGCAGGATTTGAAAAATGGATTTGTTGAACCAAAAGTAAGGAAG AAGTATAAGAATGCTGAAAATAAACTGGGTTGGAATGTTAACCTTGGAAAATTTCCAGAT ATGGGTGAAAGAAATGACCCTAAAACTTTAAAAGATCTTCGCTTCTCAGAGAGTCCACGG GAAACTCCAGCTTTCCGTGAAGAATCAGCCTCTAGACCAGCCACCCAACAGACCCAGTTC CCTGGTTTTGCGCACATAACTGGTCAGAAGAGTTTGACAAGCACGGAGATCATGAGAATT CAGAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTCGTGCGCCGCCCGTCTGATCCC TTTGCTCGCTACTGTCTTGAATGCGGCTCTTCTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTTGAGCTGTGGGCTGTCTGCCTGGGGGCGGCGGAGGTACCTCGGGGGGTCCCAATCGG TTCCCGGTGGTCAGAGGAGGAGGAGGAGGATTGCATCCCTCACTCCAGCTGAGAGGAGGG AAAATGACTGCTGGTTCAGTGTGTGTTCCTCAAATCATACCACTGAGGGTGCCTCAGCCC GGAAAAGCCAACCATGAAATTGATAACAATACACTTTTGGAAATGAAATCAGACACCCCA GATGTCAACATCTATTATACCCTGGATGGCAGCAAACCTGAATTCCTAAAGAAAATTGGT TATGGCGAAAATAATACATTTAAGTACACGAAGCCTATTACCCTGCCTGATGGAAAAATA CAAGTTAAAGCTATTGCAGTCTCTAAAGACTGCAGACAGAGCGCCGTTGTAACAAAGGTG TTTCAGGTGGACTTTGTGCCACCAGATGCAGCCTCTTCAGAAGACACTGTGGAAAATGCT CTCAAAGATTCTTCAAAGCAGGATTTGAAAAATGGATTTGTTGAACCAAAAGTAAGGAAG AAGTATAAGAATGCTGAAAATAAACTGGGTTGGAATGTTAACCTTGGAAAATTTCCAGAT ATGGGTGAAAGAAATGACCCTAAAACTTTAAAAGATCTTCGCTTCTCAGAGAGTCCACGG GAAACTCCAGCTTTCCGTGAAGAATCAGCCTCTAGACCAGCCACCCAACAGACCCAGTTC CCTGGTTTTGCGCACATAACTGGTCAGAAGAGTTTGACAAGCACGGAGATCATGAGAATT CAGAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTCGTGCGCCGCCCGTCTGATCCC TTTGCTCGCTACTGTCTTGAATGCGGCTCTTCTGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 229-386, gnl|bosTau2|chr13 (24227970-24227813) | |
| 229-386, gnl|Hg17|chr20 (18388954-18388797) | |
| 229-386, gnl|Mm7|chr2 (144263429-144263270) | |
| 387-502, gnl|bosTau2|chr13 (24220958-24220843) | |
| 387-502, gnl|canFam2|chr24 (7739445-7739032) | |
| 387-502, gnl|dasNov1|scaffold_27040 (10538-10152) | |
| 387-502, gnl|hg17|chr20 (18383645-18384058) | |
| 387-502, gnl|Hg17|chr20 (18384005-18383890) | |
| 387-502, gnl|loxAfr1|scaffold_5158 (29032-29442) | |
| 387-502, gnl|mm7|chr2 (144254019-144254419) | |
| 387-502, gnl|Mm7|chr2 (144254367-144254252) | |
| 387-502, gnl|panTro1|chr21 (18263794-18264206) | |
| 387-502, gnl|rheMac2|chr10 (51783409-51783822) | |
| 387-502, gnl|rn3|chr3 (132966368-132966763) | |
| 597-724, gnl|bosTau2|chr13 (24218223-24218096) | |
| 597-724, gnl|canFam2|chr24 (7742023-7741687) | |
| 597-724, gnl|hg17|chr20 (18381045-18381382) | |
| 597-724, gnl|Hg17|chr20 (18381385-18381252) | |
| 597-724, gnl|loxAfr1|scaffold_5158 (26379-26675) | |
| 597-724, gnl|mm7|chr2 (144250806-144251148) | |
| 597-724, gnl|Mm7|chr2 (144251151-144251018) | |
| 597-724, gnl|panTro1|chr21 (18261208-18261546) | |
| 597-724, gnl|rheMac2|chr10 (51780805-51781144) | |
| 597-724, gnl|rn3|chr3 (132963870-132964194) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 229-386, gnl|bosTau2|chr13 (24227970-24227813) | |
| 229-386, gnl|Hg17|chr20 (18388954-18388797) | |
| 229-386, gnl|Mm7|chr2 (144263429-144263270) | |
| 387-502, gnl|bosTau2|chr13 (24220958-24220843) | |
| 387-502, gnl|canFam2|chr24 (7739445-7739032) | |
| 387-502, gnl|dasNov1|scaffold_27040 (10538-10152) | |
| 387-502, gnl|hg17|chr20 (18383645-18384058) | |
| 387-502, gnl|Hg17|chr20 (18384005-18383890) | |
| 387-502, gnl|loxAfr1|scaffold_5158 (29032-29442) | |
| 387-502, gnl|mm7|chr2 (144254019-144254419) | |
| 387-502, gnl|Mm7|chr2 (144254367-144254252) | |
| 387-502, gnl|panTro1|chr21 (18263794-18264206) | |
| 387-502, gnl|rheMac2|chr10 (51783409-51783822) | |
| 387-502, gnl|rn3|chr3 (132966368-132966763) | |
| 597-724, gnl|bosTau2|chr13 (24218223-24218096) | |
| 597-724, gnl|canFam2|chr24 (7742023-7741687) | |
| 597-724, gnl|hg17|chr20 (18381045-18381382) | |
| 597-724, gnl|Hg17|chr20 (18381385-18381252) | |
| 597-724, gnl|loxAfr1|scaffold_5158 (26379-26675) | |
| 597-724, gnl|mm7|chr2 (144250806-144251148) | |
| 597-724, gnl|Mm7|chr2 (144251151-144251018) | |
| 597-724, gnl|panTro1|chr21 (18261208-18261546) | |
| 597-724, gnl|rheMac2|chr10 (51780805-51781144) | |
| 597-724, gnl|rn3|chr3 (132963870-132964194) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) |