Ss1.1-Ova1-OVR010012E04.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TGCTTCCGCAGAGCCTTCCGCAGTGGCCAGGACCGAGGGTGCCTGCGGCGGATCAGCTGG ATATTCTTACTACCAGAATTCCAAAGGAACTGATCAAATCAAAGATGGACACAAAGTGAA CTCACCCAGAACCAAGCTGCAAGAGTTATGGAAAACGCCTCACATTCAAACAATTCACAT TCCGAAATCAATGATGGAGACATCCTTTCGAAAGCATTCAGACCTCACCTTAGGCCAGAA GCGTTACCTGTGCAGCATTGCTAAGATCTATAATGCAAACTACCTGAGGACGTTAATGAA GAGGCAGTACCTGCATGTGATCCAGCGCAGCTCACAAAAGCCAGGTGTCCTCACTCATCA CAGAAGCCACCTCGGTTCTCGTTACTCACAGAAGCAGCATTACCCCTGCACCACATGGCG ACACCAACTGGAGAGAGAAAACTCGGGGCCTTCTAACATGGCAGCTGCATCTGCACCTGA GATGATCATACAGCATTCCCTTTGGCGACCAGTGAGAAACAAAGAAGGTTTAAAAACTGG ATATGCATCAAAAACAAGATGTAAGTCACTGAAGATTTTTAGAAAACCAGGCAGACTGTT CATCCAATCAGTTTCTACAAATGATTCTGAATCATACATGAATGAAGAAAAAAAAGAAGA CGATTTACTAAACAGATGTATGCAATCAATGTCAATTGAAGAACAGGGAGAACATCTGAT GCTAACTTGACAGTTCTGTCTTGTGTACTGATGATG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TGCTTCCGCAGAGCCTTCCGCAGTGGCCAGGACCGAGGGTGCCTGCGGCGGATCAGCTGG ATATTCTTACTACCAGAATTCCAAAGGAACTGATCAAATCAAAGATGGACACAAAGTGAA CTCACCCAGAACCAAGCTGCAAGAGTTATGGAAAACGCCTCACATTCAAACAATTCACAT TCCGAAATCAATGATGGAGACATCCTTTCGAAAGCATTCAGACCTCACCTTAGGCCAGAA GCGTTACCTGTGCAGCATTGCTAAGATCTATAATGCAAACTACCTGAGGACGTTAATGAA GAGGCAGTACCTGCATGTGATCCAGCGCAGCTCACAAAAGCCAGGTGTCCTCACTCATCA CAGAAGCCACCTCGGTTCTCGTTACTCACAGAAGCAGCATTACCCCTGCACCACATGGCG ACACCAACTGGAGAGAGAAAACTCGGGGCCTTCTAACATGGCAGCTGCATCTGCACCTGA GATGATCATACAGCATTCCCTTTGGCGACCAGTGAGAAACAAAGAAGGTTTAAAAACTGG ATATGCATCAAAAACAAGATGTAAGTCACTGAAGATTTTTAGAAAACCAGGCAGACTGTT CATCCAATCAGTTTCTACAAATGATTCTGAATCATACATGAATGAAGAAAAAAAAGAAGA CGATTTACTAAACAGATGTATGCAATCAATGTCAATTGAAGAACAGGGAGAACATCTGAT GCTAACTTGACAGTTCTGTCTTGTGTACTGATGATG |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 40 entry(ies) | More info |
Aligned organism(s): 40 entry(ies) | Help | Less info |
97-214, gnl|bosTau2|chr17 (30240892-30240781) | |
97-214, gnl|canFam2|chr26 (11315352-11315594) | |
97-214, gnl|echTel1|scaffold_27282 (3088-2829) | |
97-214, gnl|hg17|chr12 (109385516-109385776) | |
97-214, gnl|Hg17|chr12 (109385607-109385724) | |
97-214, gnl|loxAfr1|scaffold_8228 (33183-33425) | |
97-214, gnl|mm7|chr5 (121603914-121603721) | |
97-214, gnl|Mm7|chr5 (121603856-121603739) | |
97-214, gnl|monDom2|scaffold_97 (880008-879772) | |
97-214, gnl|oryCun1|scaffold_86852 (6762-7020) | |
97-214, gnl|panTro1|chr10 (111960499-111960760) | |
97-214, gnl|rheMac2|chr11 (111414793-111415028) | |
97-214, gnl|rn3|chr12 (35259039-35259211) | |
342-528, gnl|bosTau2|chr17 (30239744-30239561) | |
342-528, gnl|canFam2|chr26 (11316777-11317031) | |
342-528, gnl|echTel1|scaffold_27282 (1541-1288) | |
342-528, gnl|hg17|chr12 (109386993-109387248) | |
342-528, gnl|Hg17|chr12 (109387056-109387242) | |
342-528, gnl|loxAfr1|scaffold_8228 (34676-34931) | |
342-528, gnl|mm7|chr5 (121601809-121601566) | |
342-528, gnl|Mm7|chr5 (121601744-121601570) | |
342-528, gnl|monDom2|scaffold_97 (877389-877128) | |
342-528, gnl|oryCun1|scaffold_86852 (8442-8679) | |
342-528, gnl|panTro1|chr10 (111961977-111962232) | |
342-528, gnl|rheMac2|chr11 (111417026-111417283) | |
342-528, gnl|rn3|chr12 (35262588-35262826) | |
603-732, gnl|bosTau2|chr17 (30237302-30237173) | |
603-732, gnl|canFam2|chr26 (11318770-11318930) | |
603-732, gnl|dasNov1|scaffold_9338 (1466-1638) | |
603-732, gnl|echTel1|scaffold_315023 (80038-79880) | |
603-732, gnl|hg17|chr12 (109390519-109390687) | |
603-732, gnl|Hg17|chr12 (109390535-109390664) | |
603-732, gnl|loxAfr1|scaffold_8228 (37285-37447) | |
603-732, gnl|mm7|chr5 (121599164-121599002) | |
603-732, gnl|Mm7|chr5 (121599150-121599023) | |
603-732, gnl|monDom2|scaffold_97 (873675-873473) | |
603-732, gnl|oryCun1|scaffold_86852 (10978-11143) | |
603-732, gnl|panTro1|chr10 (111968021-111968189) | |
603-732, gnl|rheMac2|chr11 (111420823-111420991) | |
603-732, gnl|rn3|chr12 (35265127-35265293) |
Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
97-214, gnl|bosTau2|chr17 (30240892-30240781) | |
97-214, gnl|canFam2|chr26 (11315352-11315594) | |
97-214, gnl|echTel1|scaffold_27282 (3088-2829) | |
97-214, gnl|hg17|chr12 (109385516-109385776) | |
97-214, gnl|Hg17|chr12 (109385607-109385724) | |
97-214, gnl|loxAfr1|scaffold_8228 (33183-33425) | |
97-214, gnl|mm7|chr5 (121603914-121603721) | |
97-214, gnl|Mm7|chr5 (121603856-121603739) | |
97-214, gnl|monDom2|scaffold_97 (880008-879772) | |
97-214, gnl|oryCun1|scaffold_86852 (6762-7020) | |
97-214, gnl|panTro1|chr10 (111960499-111960760) | |
97-214, gnl|rheMac2|chr11 (111414793-111415028) | |
97-214, gnl|rn3|chr12 (35259039-35259211) | |
342-528, gnl|bosTau2|chr17 (30239744-30239561) | |
342-528, gnl|canFam2|chr26 (11316777-11317031) | |
342-528, gnl|echTel1|scaffold_27282 (1541-1288) | |
342-528, gnl|hg17|chr12 (109386993-109387248) | |
342-528, gnl|Hg17|chr12 (109387056-109387242) | |
342-528, gnl|loxAfr1|scaffold_8228 (34676-34931) | |
342-528, gnl|mm7|chr5 (121601809-121601566) | |
342-528, gnl|Mm7|chr5 (121601744-121601570) | |
342-528, gnl|monDom2|scaffold_97 (877389-877128) | |
342-528, gnl|oryCun1|scaffold_86852 (8442-8679) | |
342-528, gnl|panTro1|chr10 (111961977-111962232) | |
342-528, gnl|rheMac2|chr11 (111417026-111417283) | |
342-528, gnl|rn3|chr12 (35262588-35262826) | |
603-732, gnl|bosTau2|chr17 (30237302-30237173) | |
603-732, gnl|canFam2|chr26 (11318770-11318930) | |
603-732, gnl|dasNov1|scaffold_9338 (1466-1638) | |
603-732, gnl|echTel1|scaffold_315023 (80038-79880) | |
603-732, gnl|hg17|chr12 (109390519-109390687) | |
603-732, gnl|Hg17|chr12 (109390535-109390664) | |
603-732, gnl|loxAfr1|scaffold_8228 (37285-37447) | |
603-732, gnl|mm7|chr5 (121599164-121599002) | |
603-732, gnl|Mm7|chr5 (121599150-121599023) | |
603-732, gnl|monDom2|scaffold_97 (873675-873473) | |
603-732, gnl|oryCun1|scaffold_86852 (10978-11143) | |
603-732, gnl|panTro1|chr10 (111968021-111968189) | |
603-732, gnl|rheMac2|chr11 (111420823-111420991) | |
603-732, gnl|rn3|chr12 (35265127-35265293) |
Expressed library(ies): 7 entry(ies) | More info |
Expressed library(ies): 7 entry(ies) | Help | Less info |
tes (0.207814) | |
cmu (0.186393) | |
sin (0.174948) | |
duo (0.172801) | |
lyg (0.133103) | |
kid (0.129735) | |
bla (0.124347) |
Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
tes (0.207814) | |
cmu (0.186393) | |
sin (0.174948) | |
duo (0.172801) | |
lyg (0.133103) | |
kid (0.129735) | |
bla (0.124347) |