Ss1.1-Ova1-OVR010017F08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCTGGAGCTCTGGCAACCTAACTGGGAAGGCCTGTGAGGCTGGCTGGCTGTGGACCTG CACGCTGCCCGGTTTGCCAGCTGCCAGGGGGGTGGCTGTGCCACCGGTTTCAGTTCCCTC CCCCTTTCCCTCTAAGGATGGCCCAGAAGGAGAACACCTACCCCTGGCCCTACGGTCGGC AGACGGCTCAGTCTGGTCTGAACATCCTGCCCCAGAGAGTCCTTCGGAAGGAGGCTGTCA CCCCATCAGCGCTTGTCCTCATGAGCCGCTCCAATACCCAGCCCACAGCTGCCCCTGGCC AGAAGGTGGTGGAGAACAGCAGTGGGACCCCCAACTTCTCAACGCGTTCCTTCACCATCG ATGACTTTGAGATTGGGCGGCCTCTGGGCAAAGGCAAGTTTGGAAATGTGTACTTGGCTC GAGAGAAGAAAAGCCATTTCATCGTGGCGCTCAAAGTCCTCTTCAAGTCTCAGATAGAGA AGGAGGGCGTGGAGCACCAGCTGCGCAGAGAGATCGAAATCCAGGCCCATCTGCAGCATC CAAACATCTTGCGTCTCTACAACTATTTCTATGACCGGAGAAGGATCTACTTGATTCTGG AGTATGCCCCCCGGGGGGAGCTCTACAAGGAACTGCAGAAATGCCGCACTTTTGACGAGC AGCGAACAGCCACGATCATGGAGGAGCTGGCAGACGCTCTGATATACTGCCATGGGAAGA AGGTGATTCACAGAGACATAAAGCCAGAGAATCTGCTCTTGGGGCTCCAGGGAGAGCTGA AGATTGCCGACTTCGGCTGGTCTGTGCACGCCCCCTCACTTAGGAGGAAGACCATGTGTG GCACCCTGGACTACCTGCCCCCAGAGATGATAGAGGGGCGCACACACAACGAGAAGGTGG ATCTGTGGTGCATCGGAGTCCTCTGCTATGAGCTGTTGGTGGGAAACCCGCCCTTCGAGA GTGCTTCCCACAACGAGACCTACCGTCGCATCGTAAAGGTGGACCTTAAGTTCCCCCCTT CCGTGCCAGCGGGAGCCCAGGACCTCATCTCCAAGCTGCTCAAGCATAACCCCTCGGATC GGCTGCCACTGGCCCAGGTCTCAGCCCACCCTTGGGTCCGCGCCCACTCCCGGAGGGTGC TGCCTCCCTCTGCCCCTCAGTCTGTCCCCTGAATTGTCCCTGTCAGTTCCACAGTCGTAT CTGTGTCTGTATGAATGTGTATGTGTAGTTAGAAGGAGGGGTCCCTGGCCTGATCCCGCA CCTGCCTTCTCCCTCCTTTTTATTTAATAAAGGCGGAAGCGTTTTGTAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCTGGAGCTCTGGCAACCTAACTGGGAAGGCCTGTGAGGCTGGCTGGCTGTGGACCTG CACGCTGCCCGGTTTGCCAGCTGCCAGGGGGGTGGCTGTGCCACCGGTTTCAGTTCCCTC CCCCTTTCCCTCTAAGGATGGCCCAGAAGGAGAACACCTACCCCTGGCCCTACGGTCGGC AGACGGCTCAGTCTGGTCTGAACATCCTGCCCCAGAGAGTCCTTCGGAAGGAGGCTGTCA CCCCATCAGCGCTTGTCCTCATGAGCCGCTCCAATACCCAGCCCACAGCTGCCCCTGGCC AGAAGGTGGTGGAGAACAGCAGTGGGACCCCCAACTTCTCAACGCGTTCCTTCACCATCG ATGACTTTGAGATTGGGCGGCCTCTGGGCAAAGGCAAGTTTGGAAATGTGTACTTGGCTC GAGAGAAGAAAAGCCATTTCATCGTGGCGCTCAAAGTCCTCTTCAAGTCTCAGATAGAGA AGGAGGGCGTGGAGCACCAGCTGCGCAGAGAGATCGAAATCCAGGCCCATCTGCAGCATC CAAACATCTTGCGTCTCTACAACTATTTCTATGACCGGAGAAGGATCTACTTGATTCTGG AGTATGCCCCCCGGGGGGAGCTCTACAAGGAACTGCAGAAATGCCGCACTTTTGACGAGC AGCGAACAGCCACGATCATGGAGGAGCTGGCAGACGCTCTGATATACTGCCATGGGAAGA AGGTGATTCACAGAGACATAAAGCCAGAGAATCTGCTCTTGGGGCTCCAGGGAGAGCTGA AGATTGCCGACTTCGGCTGGTCTGTGCACGCCCCCTCACTTAGGAGGAAGACCATGTGTG GCACCCTGGACTACCTGCCCCCAGAGATGATAGAGGGGCGCACACACAACGAGAAGGTGG ATCTGTGGTGCATCGGAGTCCTCTGCTATGAGCTGTTGGTGGGAAACCCGCCCTTCGAGA GTGCTTCCCACAACGAGACCTACCGTCGCATCGTAAAGGTGGACCTTAAGTTCCCCCCTT CCGTGCCAGCGGGAGCCCAGGACCTCATCTCCAAGCTGCTCAAGCATAACCCCTCGGATC GGCTGCCACTGGCCCAGGTCTCAGCCCACCCTTGGGTCCGCGCCCACTCCCGGAGGGTGC TGCCTCCCTCTGCCCCTCAGTCTGTCCCCTGAATTGTCCCTGTCAGTTCCACAGTCGTAT CTGTGTCTGTATGAATGTGTATGTGTAGTTAGAAGGAGGGGTCCCTGGCCTGATCCCGCA CCTGCCTTCTCCCTCCTTTTTATTTAATAAAGGCGGAAGCGTTTTGTAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
| 185-288, gnl|bosTau2|chr2 (77529988-77529885) | |
| 185-288, gnl|canFam2|chr5 (36010854-36011105) | |
| 185-288, gnl|dasNov1|scaffold_78121 (6553-6823) | |
| 185-288, gnl|hg17|chr17 (8051702-8051956) | |
| 185-288, gnl|Hg17|chr17 (8051884-8051781) | |
| 185-288, gnl|loxAfr1|scaffold_28997 (1706-1456) | |
| 185-288, gnl|mm7|chr11 (69129515-69129290) | |
| 185-288, gnl|Mm7|chr11 (69129358-69129461) | |
| 185-288, gnl|monDom2|scaffold_66 (5507332-5507040) | |
| 185-288, gnl|oryCun1|scaffold_158683 (2854-2609) | |
| 185-288, gnl|panTro1|chr19_random (30401182-30400928) | |
| 185-288, gnl|rheMac2|chr16 (7961578-7961822) | |
| 185-288, gnl|rn3|chr10 (55814327-55814121) | |
| 351-536, gnl|bosTau2|chr18 (53655229-53655044) | |
| 351-536, gnl|Hg17|chr19 (62435220-62435405) | |
| 351-536, gnl|Mm7|chr7 (9785811-9785996) | |
| 543-694, gnl|bosTau2|chr18 (49216106-49216256) | |
| 543-694, gnl|Hg17|chr19 (62435729-62435877) | |
| 543-694, gnl|Mm7|chr7 (9886582-9886728) | |
| 753-1153, gnl|bosTau2|chr24 (4676082-4676479) | |
| 753-1153, gnl|Hg17|chr19 (62436718-62438581) | |
| 753-1153, gnl|Mm7|chr4 (44766529-44766107) | |
| 821-1002, gnl|bosTau2|chr18 (53652399-53652218) | |
| 821-1002, gnl|canFam2|chr1 (103906343-103906165) | |
| 821-1002, gnl|danRer3|chr23 (19536982-19537160) | |
| 821-1002, gnl|dasNov1|scaffold_69034 (3696-3518) | |
| 821-1002, gnl|echTel1|scaffold_274828 (3968-3790) | |
| 821-1002, gnl|fr1|chrUn (44575757-44575935) | |
| 821-1002, gnl|galGal2|chr20 (11545185-11545363) | |
| 821-1002, gnl|hg17|chr19 (62438063-62438241) | |
| 821-1002, gnl|Hg17|chr19 (62438061-62438242) | |
| 821-1002, gnl|loxAfr1|scaffold_28997 (4285-4463) | |
| 821-1002, gnl|mm7|chr7 (9692075-9691898) | |
| 821-1002, gnl|Mm7|chr7 (9791779-9791960) | |
| 821-1002, gnl|monDom2|scaffold_66 (5509429-5509607) | |
| 821-1002, gnl|oryCun1|scaffold_198723 (21196-21018) | |
| 821-1002, gnl|panTro1|chr20 (60173046-60173224) | |
| 821-1002, gnl|rheMac2|chr19 (63073006-63073184) | |
| 821-1002, gnl|rn3|chr1 (65320998-65320820) | |
| 821-1002, gnl|tetNig1|chr1 (5464878-5464700) | |
| 821-1002, gnl|xenTro1|scaffold_814 (376817-376639) | |
| 822-983, gnl|bosTau2|chr13 (40907007-40907168) | |
| 822-983, gnl|canFam2|chr21 (7437688-7437863) | |
| 822-983, gnl|canFam2|chr24 (44567321-44567143) | |
| 822-983, gnl|canFam2|chr24 (44567140-44567335) | |
| 822-983, gnl|danRer3|chrNA (52612254-52612079) | |
| 822-983, gnl|danRer3|chrNA (52612076-52612257) | |
| 822-983, gnl|danRer3|chrNA (52612257-52612075) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149308-149133) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149130-149327) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149311-149116) | |
| 822-983, gnl|echTel1|scaffold_304397 (8744-8917) | |
| 822-983, gnl|echTel1|scaffold_304397 (8920-8740) | |
| 822-983, gnl|echTel1|scaffold_304397 (8744-8922) | |
| 822-983, gnl|fr1|chrUn (44575935-44575760) | |
| 822-983, gnl|fr1|chrUn (44575757-44575938) | |
| 822-983, gnl|fr1|chrUn (44575938-44575754) | |
| 822-983, gnl|galGal2|chr20 (11545363-11545188) | |
| 822-983, gnl|galGal2|chr20 (11545363-11545183) | |
| 822-983, gnl|hg17|chr1 (216828625-216828800) | |
| 822-983, gnl|hg17|chr10 (115995778-115995982) | |
| 822-983, gnl|hg17|chr20 (54378944-54379139) | |
| 822-983, gnl|Hg17|chr20 (54379124-54378963) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9711-9535) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9532-9727) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9714-9518) | |
| 822-983, gnl|mm7|chr14 (16649903-16649740) | |
| 822-983, gnl|mm7|chr2 (172149912-172149734) | |
| 822-983, gnl|mm7|chr2 (172149731-172149925) | |
| 822-983, gnl|Mm7|chr2 (172149911-172149750) | |
| 822-983, gnl|monDom2|scaffold_1 (169621294-169621469) | |
| 822-983, gnl|monDom2|scaffold_1 (169621472-169621294) | |
| 822-983, gnl|monDom2|scaffold_1 (169621291-169621486) | |
| 822-983, gnl|oryCun1|scaffold_131402 (1442-1266) | |
| 822-983, gnl|oryCun1|scaffold_211767 (11776-11951) | |
| 822-983, gnl|oryCun1|scaffold_211767 (11773-11963) | |
| 822-983, gnl|panTro1|chr1 (200560521-200560696) | |
| 822-983, gnl|panTro1|chr21 (57296623-57296818) | |
| 822-983, gnl|panTro1|chr8 (118158745-118158949) | |
| 822-983, gnl|rheMac2|chr1 (150096055-150095880) | |
| 822-983, gnl|rheMac2|chr10 (8176038-8175845) | |
| 822-983, gnl|rheMac2|chr9 (113906566-113906767) | |
| 822-983, gnl|rn3|chr10 (1447922-1448107) | |
| 822-983, gnl|rn3|chr10 (450449-450633) | |
| 822-983, gnl|rn3|chr3 (163177942-163178135) | |
| 822-983, gnl|tetNig1|chr11 (2996722-2996897) | |
| 822-983, gnl|tetNig1|chr11 (2996900-2996719) | |
| 822-983, gnl|tetNig1|chr11 (2996719-2996903) | |
| 822-983, gnl|xenTro1|scaffold_1157 (194113-193938) | |
| 822-983, gnl|xenTro1|scaffold_1157 (193935-194113) | |
| 822-983, gnl|xenTro1|scaffold_1157 (194113-193930) |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 185-288, gnl|bosTau2|chr2 (77529988-77529885) | |
| 185-288, gnl|canFam2|chr5 (36010854-36011105) | |
| 185-288, gnl|dasNov1|scaffold_78121 (6553-6823) | |
| 185-288, gnl|hg17|chr17 (8051702-8051956) | |
| 185-288, gnl|Hg17|chr17 (8051884-8051781) | |
| 185-288, gnl|loxAfr1|scaffold_28997 (1706-1456) | |
| 185-288, gnl|mm7|chr11 (69129515-69129290) | |
| 185-288, gnl|Mm7|chr11 (69129358-69129461) | |
| 185-288, gnl|monDom2|scaffold_66 (5507332-5507040) | |
| 185-288, gnl|oryCun1|scaffold_158683 (2854-2609) | |
| 185-288, gnl|panTro1|chr19_random (30401182-30400928) | |
| 185-288, gnl|rheMac2|chr16 (7961578-7961822) | |
| 185-288, gnl|rn3|chr10 (55814327-55814121) | |
| 351-536, gnl|bosTau2|chr18 (53655229-53655044) | |
| 351-536, gnl|Hg17|chr19 (62435220-62435405) | |
| 351-536, gnl|Mm7|chr7 (9785811-9785996) | |
| 543-694, gnl|bosTau2|chr18 (49216106-49216256) | |
| 543-694, gnl|Hg17|chr19 (62435729-62435877) | |
| 543-694, gnl|Mm7|chr7 (9886582-9886728) | |
| 753-1153, gnl|bosTau2|chr24 (4676082-4676479) | |
| 753-1153, gnl|Hg17|chr19 (62436718-62438581) | |
| 753-1153, gnl|Mm7|chr4 (44766529-44766107) | |
| 821-1002, gnl|bosTau2|chr18 (53652399-53652218) | |
| 821-1002, gnl|canFam2|chr1 (103906343-103906165) | |
| 821-1002, gnl|danRer3|chr23 (19536982-19537160) | |
| 821-1002, gnl|dasNov1|scaffold_69034 (3696-3518) | |
| 821-1002, gnl|echTel1|scaffold_274828 (3968-3790) | |
| 821-1002, gnl|fr1|chrUn (44575757-44575935) | |
| 821-1002, gnl|galGal2|chr20 (11545185-11545363) | |
| 821-1002, gnl|hg17|chr19 (62438063-62438241) | |
| 821-1002, gnl|Hg17|chr19 (62438061-62438242) | |
| 821-1002, gnl|loxAfr1|scaffold_28997 (4285-4463) | |
| 821-1002, gnl|mm7|chr7 (9692075-9691898) | |
| 821-1002, gnl|Mm7|chr7 (9791779-9791960) | |
| 821-1002, gnl|monDom2|scaffold_66 (5509429-5509607) | |
| 821-1002, gnl|oryCun1|scaffold_198723 (21196-21018) | |
| 821-1002, gnl|panTro1|chr20 (60173046-60173224) | |
| 821-1002, gnl|rheMac2|chr19 (63073006-63073184) | |
| 821-1002, gnl|rn3|chr1 (65320998-65320820) | |
| 821-1002, gnl|tetNig1|chr1 (5464878-5464700) | |
| 821-1002, gnl|xenTro1|scaffold_814 (376817-376639) | |
| 822-983, gnl|bosTau2|chr13 (40907007-40907168) | |
| 822-983, gnl|canFam2|chr21 (7437688-7437863) | |
| 822-983, gnl|canFam2|chr24 (44567321-44567143) | |
| 822-983, gnl|canFam2|chr24 (44567140-44567335) | |
| 822-983, gnl|danRer3|chrNA (52612254-52612079) | |
| 822-983, gnl|danRer3|chrNA (52612076-52612257) | |
| 822-983, gnl|danRer3|chrNA (52612257-52612075) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149308-149133) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149130-149327) | |
| 822-983, gnl|dasNov1|scaffold_1805 (149311-149116) | |
| 822-983, gnl|echTel1|scaffold_304397 (8744-8917) | |
| 822-983, gnl|echTel1|scaffold_304397 (8920-8740) | |
| 822-983, gnl|echTel1|scaffold_304397 (8744-8922) | |
| 822-983, gnl|fr1|chrUn (44575935-44575760) | |
| 822-983, gnl|fr1|chrUn (44575757-44575938) | |
| 822-983, gnl|fr1|chrUn (44575938-44575754) | |
| 822-983, gnl|galGal2|chr20 (11545363-11545188) | |
| 822-983, gnl|galGal2|chr20 (11545363-11545183) | |
| 822-983, gnl|hg17|chr1 (216828625-216828800) | |
| 822-983, gnl|hg17|chr10 (115995778-115995982) | |
| 822-983, gnl|hg17|chr20 (54378944-54379139) | |
| 822-983, gnl|Hg17|chr20 (54379124-54378963) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9711-9535) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9532-9727) | |
| 822-983, gnl|loxAfr1|scaffold_47239 (9714-9518) | |
| 822-983, gnl|mm7|chr14 (16649903-16649740) | |
| 822-983, gnl|mm7|chr2 (172149912-172149734) | |
| 822-983, gnl|mm7|chr2 (172149731-172149925) | |
| 822-983, gnl|Mm7|chr2 (172149911-172149750) | |
| 822-983, gnl|monDom2|scaffold_1 (169621294-169621469) | |
| 822-983, gnl|monDom2|scaffold_1 (169621472-169621294) | |
| 822-983, gnl|monDom2|scaffold_1 (169621291-169621486) | |
| 822-983, gnl|oryCun1|scaffold_131402 (1442-1266) | |
| 822-983, gnl|oryCun1|scaffold_211767 (11776-11951) | |
| 822-983, gnl|oryCun1|scaffold_211767 (11773-11963) | |
| 822-983, gnl|panTro1|chr1 (200560521-200560696) | |
| 822-983, gnl|panTro1|chr21 (57296623-57296818) | |
| 822-983, gnl|panTro1|chr8 (118158745-118158949) | |
| 822-983, gnl|rheMac2|chr1 (150096055-150095880) | |
| 822-983, gnl|rheMac2|chr10 (8176038-8175845) | |
| 822-983, gnl|rheMac2|chr9 (113906566-113906767) | |
| 822-983, gnl|rn3|chr10 (1447922-1448107) | |
| 822-983, gnl|rn3|chr10 (450449-450633) | |
| 822-983, gnl|rn3|chr3 (163177942-163178135) | |
| 822-983, gnl|tetNig1|chr11 (2996722-2996897) | |
| 822-983, gnl|tetNig1|chr11 (2996900-2996719) | |
| 822-983, gnl|tetNig1|chr11 (2996719-2996903) | |
| 822-983, gnl|xenTro1|scaffold_1157 (194113-193938) | |
| 822-983, gnl|xenTro1|scaffold_1157 (193935-194113) | |
| 822-983, gnl|xenTro1|scaffold_1157 (194113-193930) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| ill (0.351185) | |
| nbm (0.297974) | |
| fty (0.17584) | |
| nmm (0.132802) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.351185) | |
| nbm (0.297974) | |
| fty (0.17584) | |
| nmm (0.132802) | |
| jej (0.0989218) |