Ss1.1-Ova1-OVR010018A12.5
|
ACATACACTCTCTGCGCATGTGCAGAGGCTGGGGGCCGCCCCAGCCGCCGCCGCCCCCGC
CGCAGCTCTATGGTGGCTCCCTAGAGCTTTGCCGTTGGGGGCAGCTGTTGCGGCCCTGCG
ACTCAGCCCCCCTCGTGCGGCAGCGATATGGAGGAATTCGACTCCGAAGACTTCTCCACC
TCGGAGGAGGACGAGGACTACGTGCCGTCGGGTGGAGAGTATAGTGAAGATGATGTAAGT
GAACTAGTGAAGGAAGATGAAGTGGATGGTGACGAGCAGACACAGAAAACCAAAGGGAAA
AAAAGAAAGGCTCAGAGCATTCCGGCCAGGAAGAGAAAACAAGGTGGCCTCTCATTTGAA
GAAGAGGAAGAGGAAAATGCCAACGAGGAATCTGGAGGAAGTAGCAGTGAGGAGGAAGAT
TCAGCTGCAGAGCAGGAAAAAGGCATTGGGTCAGAGGATGCAAGGAAAAAGAAGGAGGAT
GAGCTGTGGGCTAGTTTCCTCAACGATGTAGGACCAAAATCCAAAGTGCCTCCAAGTACA
CATGTTAAAAAAGGAGAGGAGACTGAAGAGACAAGTTCAAGTAAGTTGTTGGTCAAAGCA
GAAGATCTGGAGAAACCTAAAGAAACAGAAAAAGTTAAAATTACCAAGGTGTTTGATTTT
GCCGGTGAAGAAGTCAGGGTGACTAAGGAAGTGGATGCTACATCTAAAGAAGCCAAATCC
TTCTTCAAGCAAAATGAGAAAGAAAAACCACAGGCTAATGTCCCTTCAGCTCTGCCATCA
CTTGCTGCCGGCTCAGGGTTAAAAAGATCAGGTGGCATGAGCAGCCTTTTGGGGAAAATT
GGAGCCAAGAAGCAGAAGATGAGCACCTTGGAGAAGTCCAAGCTGGACTGGGAGAGCTTC
AAGGAGGAAGAGGGCATTGGTGAAGAACTAGCCATCCACAATCGAGGGAAGGAGGGGTAC
ATTGAACGGAAAGCTTTTCTAGACCGAGTGGATCACAGGCAGTTTGAAATCGAGCGAGAT
CTCAGGCTGAGCAAAATGAAACCCTGATGTGTGGGGAACCTACAGCAGCTTAATCCTGTT
TACACCGTGAGCTTCTTGTGTCTGTGAAATGTTTCACCTGTGTCTCATCGACTGTTTCCC
CGCAAGGTCTTTTTTTCTATATGAAATTTCTGTCTTTGTATCTTGATCTCACATGGTTTC
ATTCATTCTACCTTTAATAGTTTGTCCTTGGAAAAATAAAAATAAAAAAATAGAAGTCGG
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACATACACTCTCTGCGCATGTGCAGAGGCTGGGGGCCGCCCCAGCCGCCGCCGCCCCCGC
CGCAGCTCTATGGTGGCTCCCTAGAGCTTTGCCGTTGGGGGCAGCTGTTGCGGCCCTGCG
ACTCAGCCCCCCTCGTGCGGCAGCGATATGGAGGAATTCGACTCCGAAGACTTCTCCACC
TCGGAGGAGGACGAGGACTACGTGCCGTCGGGTGGAGAGTATAGTGAAGATGATGTAAGT
GAACTAGTGAAGGAAGATGAAGTGGATGGTGACGAGCAGACACAGAAAACCAAAGGGAAA
AAAAGAAAGGCTCAGAGCATTCCGGCCAGGAAGAGAAAACAAGGTGGCCTCTCATTTGAA
GAAGAGGAAGAGGAAAATGCCAACGAGGAATCTGGAGGAAGTAGCAGTGAGGAGGAAGAT
TCAGCTGCAGAGCAGGAAAAAGGCATTGGGTCAGAGGATGCAAGGAAAAAGAAGGAGGAT
GAGCTGTGGGCTAGTTTCCTCAACGATGTAGGACCAAAATCCAAAGTGCCTCCAAGTACA
CATGTTAAAAAAGGAGAGGAGACTGAAGAGACAAGTTCAAGTAAGTTGTTGGTCAAAGCA
GAAGATCTGGAGAAACCTAAAGAAACAGAAAAAGTTAAAATTACCAAGGTGTTTGATTTT
GCCGGTGAAGAAGTCAGGGTGACTAAGGAAGTGGATGCTACATCTAAAGAAGCCAAATCC
TTCTTCAAGCAAAATGAGAAAGAAAAACCACAGGCTAATGTCCCTTCAGCTCTGCCATCA
CTTGCTGCCGGCTCAGGGTTAAAAAGATCAGGTGGCATGAGCAGCCTTTTGGGGAAAATT
GGAGCCAAGAAGCAGAAGATGAGCACCTTGGAGAAGTCCAAGCTGGACTGGGAGAGCTTC
AAGGAGGAAGAGGGCATTGGTGAAGAACTAGCCATCCACAATCGAGGGAAGGAGGGGTAC
ATTGAACGGAAAGCTTTTCTAGACCGAGTGGATCACAGGCAGTTTGAAATCGAGCGAGAT
CTCAGGCTGAGCAAAATGAAACCCTGATGTGTGGGGAACCTACAGCAGCTTAATCCTGTT
TACACCGTGAGCTTCTTGTGTCTGTGAAATGTTTCACCTGTGTCTCATCGACTGTTTCCC
CGCAAGGTCTTTTTTTCTATATGAAATTTCTGTCTTTGTATCTTGATCTCACATGGTTTC
ATTCATTCTACCTTTAATAGTTTGTCCTTGGAAAAATAAAAATAAAAAAATAGAAGTCGG
AAAAAAAAAAAA
|
|
gi|32879981|gb|AAP88821.1| |
Protein identifier
|
gi|32879981|gb|AAP88821.1| |
|
13-214, gnl|bosTau2|chr18 (1837523-1837718) |
|
13-214, gnl|Hg17|chr16 (74024891-74024685) |
|
13-214, gnl|Mm7|chr8 (110454387-110454186) |
| |
|
328-549, gnl|bosTau2|chr18 (1843725-1843943) |
|
328-549, gnl|Hg17|chr16 (74004155-74003934) |
|
328-549, gnl|Mm7|chr8 (110442037-110441828) |
| |
|
675-799, gnl|bosTau2|chr18 (1856656-1856780) |
|
675-799, gnl|Hg17|chr16 (73986611-73986487) |
|
675-799, gnl|Mm7|chr8 (110431037-110430913) |
| |
|
956-1257, gnl|bosTau2|chr18 (5923599-5923300) |
|
956-1257, gnl|Hg17|chr16 (73885442-73885143) |
|
956-1257, gnl|Mm7|chr8 (110368833-110368542) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
13-214, gnl|bosTau2|chr18 (1837523-1837718) |
|
13-214, gnl|Hg17|chr16 (74024891-74024685) |
|
13-214, gnl|Mm7|chr8 (110454387-110454186) |
| |
|
328-549, gnl|bosTau2|chr18 (1843725-1843943) |
|
328-549, gnl|Hg17|chr16 (74004155-74003934) |
|
328-549, gnl|Mm7|chr8 (110442037-110441828) |
| |
|
675-799, gnl|bosTau2|chr18 (1856656-1856780) |
|
675-799, gnl|Hg17|chr16 (73986611-73986487) |
|
675-799, gnl|Mm7|chr8 (110431037-110430913) |
| |
|
956-1257, gnl|bosTau2|chr18 (5923599-5923300) |
|
956-1257, gnl|Hg17|chr16 (73885442-73885143) |
|
956-1257, gnl|Mm7|chr8 (110368833-110368542) |
|
cte (0.58548) |
|
nlu (0.575043) |
|
cut (0.509771) |
|
kid (0.389206) |
|
cmu (0.372787) |
|
cje (0.330469) |
|
eje (0.296501) |
|
ssp (0.271039) |
|
eru (0.240096) |
|
pgl (0.236967) |
|
pan (0.23596) |
|
ece (0.229305) |
|
aor (0.195274) |
|
mgm (0.180343) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cki (0.165235) |
|
lun (0.150489) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
che (0.136314) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
ova (0.129132) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
cte (0.58548) |
|
nlu (0.575043) |
|
cut (0.509771) |
|
kid (0.389206) |
|
cmu (0.372787) |
|
cje (0.330469) |
|
eje (0.296501) |
|
ssp (0.271039) |
|
eru (0.240096) |
|
pgl (0.236967) |
|
pan (0.23596) |
|
ece (0.229305) |
|
aor (0.195274) |
|
mgm (0.180343) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cki (0.165235) |
|
lun (0.150489) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
che (0.136314) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
ova (0.129132) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
