Non-Coding RNA Search

Ss1.1-Ova1-OVR010019B10.5

Sequence:


               
               CAGCGCGCAGGTGCACCGCGACGCTTTCCGCAAGCTGCGCCAGTTGCGCTCGCTGGACCT
GTCCGGCAACCGGCTGCACACGCTGCCCCCCGGGCTGCCGCGGAACGTGCACGTGCTGAA
GATCAAGCGCAACGAGCTGGCCGCTCTGGCGCGCGGGGCGCTGGCCGGGATGGCCCAGCT
GCGGGAGCTCTACCTCACCGGCAACAGGCTGCGCAGCCGGGCCCTGGGCCCCCGCGCCTG
GGCCGACCTCGCAGGGCTGCAGCTGCTGGACATCGCCGGGAATCAGCTCACCGAGATCCC
CGAGGGGCTCCCGCGGTCACTCGAGTACCTGTACCTGCAGAACAACAAGATCAGTGCCGT
GCTCGCCAATGCCTTTGACTCCACACCCAACCTCAAAGGGATCTTCCTCAGGTTCAACAA
GCTGGCCGTGGGCTCCGTGGTGGACAGCGCCTTCCGGAGGCTGAAGCACCTGCAGGTCTT
GGACATAGAAGGCAACTTTGAGTTTGGTGACGTTTCCAAGGACCGGGGCCGGGTGAAGGA
GGCTGAGGAGGACGAGGACGAGGACGAGGAGGACGAGGAAAGGCGATAGTGACGGGGCAA
CTGGATCCGACGTAGGACGATGGACCGCTGGAGCCTTTCTGCAGCCCGGGCCTGAGCACG
TGAGCCACACTCCGCAAATCGCTCACAGACAAGCCCAGCACAGCCCCTGCTGGCCCCTCC
ATGCACAGACTGGACCCAGTCTCCCATCCCCACCCCTTCCTGCAGCGCATCCACCAGACA
CAAACAGACACCACACCGCCCCCACCCTGCACCCACACCCCCTTCACCCTGAGTCCTGCA
CCCTCGGGGAAGGGTCTGACCTGTCCTGGCACTCATGGGTGCTGCTCCCTGCCCCATGGA
TATGTGCATGCACGGGCGCGCGCGCGCGCGCACACACACACACACACACACGCACACACA
TGTCATGTGCAAACAGCCCTTCTTGGCAGAAATGACCACAACGGCTCGCCACCTGCTGGT
CCATCTATCTCTCGGGGAAGATGCAGAGTTATTTCCGAGCTCTCTGCAGCCAGGCGCCTG
TACCCTCTGGAACTCACAAAAGCTGGCTTTTGTTCCTTTCCCTTCATCTGGGGACAGGAA
CCTCCAGGACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCGCGCAGGTGCACCGCGACGCTTTCCGCAAGCTGCGCCAGTTGCGCTCGCTGGACCT
GTCCGGCAACCGGCTGCACACGCTGCCCCCCGGGCTGCCGCGGAACGTGCACGTGCTGAA
GATCAAGCGCAACGAGCTGGCCGCTCTGGCGCGCGGGGCGCTGGCCGGGATGGCCCAGCT
GCGGGAGCTCTACCTCACCGGCAACAGGCTGCGCAGCCGGGCCCTGGGCCCCCGCGCCTG
GGCCGACCTCGCAGGGCTGCAGCTGCTGGACATCGCCGGGAATCAGCTCACCGAGATCCC
CGAGGGGCTCCCGCGGTCACTCGAGTACCTGTACCTGCAGAACAACAAGATCAGTGCCGT
GCTCGCCAATGCCTTTGACTCCACACCCAACCTCAAAGGGATCTTCCTCAGGTTCAACAA
GCTGGCCGTGGGCTCCGTGGTGGACAGCGCCTTCCGGAGGCTGAAGCACCTGCAGGTCTT
GGACATAGAAGGCAACTTTGAGTTTGGTGACGTTTCCAAGGACCGGGGCCGGGTGAAGGA
GGCTGAGGAGGACGAGGACGAGGACGAGGAGGACGAGGAAAGGCGATAGTGACGGGGCAA
CTGGATCCGACGTAGGACGATGGACCGCTGGAGCCTTTCTGCAGCCCGGGCCTGAGCACG
TGAGCCACACTCCGCAAATCGCTCACAGACAAGCCCAGCACAGCCCCTGCTGGCCCCTCC
ATGCACAGACTGGACCCAGTCTCCCATCCCCACCCCTTCCTGCAGCGCATCCACCAGACA
CAAACAGACACCACACCGCCCCCACCCTGCACCCACACCCCCTTCACCCTGAGTCCTGCA
CCCTCGGGGAAGGGTCTGACCTGTCCTGGCACTCATGGGTGCTGCTCCCTGCCCCATGGA
TATGTGCATGCACGGGCGCGCGCGCGCGCGCACACACACACACACACACACGCACACACA
TGTCATGTGCAAACAGCCCTTCTTGGCAGAAATGACCACAACGGCTCGCCACCTGCTGGT
CCATCTATCTCTCGGGGAAGATGCAGAGTTATTTCCGAGCTCTCTGCAGCCAGGCGCCTG
TACCCTCTGGAACTCACAAAAGCTGGCTTTTGTTCCTTTCCCTTCATCTGGGGACAGGAA
CCTCCAGGACTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-262, gnl|bosTau2|chr12 (48548237-48547976)
               

               
               1-262, gnl|Hg17|chr1 (53256454-53256715)
               

               
               1-262, gnl|Mm7|chr4 (107397854-107397593)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-262, gnl|bosTau2|chr12 (48548237-48547976)
               

               
               1-262, gnl|Hg17|chr1 (53256454-53256715)
               

               
               1-262, gnl|Mm7|chr4 (107397854-107397593)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	1-262, gnl\|bosTau2\|chr12 (48548237-48547976)
	1-262, gnl\|Hg17\|chr1 (53256454-53256715)
	1-262, gnl\|Mm7\|chr4 (107397854-107397593)